prot_H-elongata_contig118476.1425.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig118476.1425.1
Unique Nameprot_H-elongata_contig118476.1425.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length42
Homology
[Close]
BLAST of mRNA_H-elongata_contig118476.1425.1 vs. uniprot
Match: D7FU30_ECTSI (zf-met2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU30_ECTSI)

HSP 1 Score: 63.2 bits (152), Expect = 4.410e-12
Identity = 35/42 (83.33%), Postives = 40/42 (95.24%), Query Frame = 0 
Query:    1 MGGGNAQKSATSRARNEAKKAKASKGSQLAVNQAACNVICQV 42
            MGGGNAQKSAT+RARNEAKKAKA KGSQLAVN+AA +++CQV
Sbjct:    1 MGGGNAQKSATARARNEAKKAKAGKGSQLAVNKAAQSIVCQV 42
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig118476.1425.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FU30_ECTSI4.410e-1283.33zf-met2 domain-containing protein n=2 Tax=Ectocarp... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026939ZNF706/At2g23090 superfamilyGENE3D4.10.1050.10coord: 1..42
e-value: 2.4E-11
score: 45.9
NoneNo IPR availableSUPERFAMILY118359Expressed protein At2g23090/F21P24.15coord: 1..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig118476contigH-elongata_contig118476:141..266 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig118476.1425.1mRNA_H-elongata_contig118476.1425.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig118476 141..266 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig118476.1425.1 ID=prot_H-elongata_contig118476.1425.1|Name=mRNA_H-elongata_contig118476.1425.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=42bp
MGGGNAQKSATSRARNEAKKAKASKGSQLAVNQAACNVICQV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026939ZNF706/At2g23090_sf