prot_H-elongata_contig66498.14247.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig66498.14247.1
Unique Nameprot_H-elongata_contig66498.14247.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length132
Homology
BLAST of mRNA_H-elongata_contig66498.14247.1 vs. uniprot
Match: D8LFV7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFV7_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 1.240e-21
Identity = 66/119 (55.46%), Postives = 71/119 (59.66%), Query Frame = 0
Query:   19 QAPGQDFTVDVKDERFAAALEGDTRFGIDRTDSSFKDTEGMRHILEERARRRDK-----RYGTQSGAFSVLRGGTPPANGHDGTTGGVLGARGGMKDKGDLSSLVSKLKSRGLGVGGHS 132
            +APGQDF VDV DERFAA LEGDTRFGIDRTDSSFKDTEGMR ILEER RR+ K     R G  +G                           G K KGDLS LV+KLK+RGL   G S
Sbjct:  799 KAPGQDFRVDVADERFAALLEGDTRFGIDRTDSSFKDTEGMRSILEERTRRKGKKRRADRDGPDAGXXXXXXXXXXXXXXXXXXXXXXXXXLCGGK-KGDLSLLVNKLKTRGLAENGSS 916          
BLAST of mRNA_H-elongata_contig66498.14247.1 vs. uniprot
Match: B7GAK3_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GAK3_PHATC)

HSP 1 Score: 65.9 bits (159), Expect = 6.260e-10
Identity = 48/105 (45.71%), Postives = 59/105 (56.19%), Query Frame = 0
Query:   22 GQDFTVDVKDERFAAALEG-DTRFGIDRTDSSFKDTEGMRHILEERA-RRRDKRYGTQSGAFSVLRGGTPPANGHDGTTGGVLGARGGMKDKGDLSSLVSKLKSR 124
            G +F VD  D+RF A L+G D RFGIDRTD SFK+T  MR IL+E+  RR+DKR    + A S  +    P    + T     GA         LSSLVS LKS+
Sbjct:  601 GTEFHVDTSDQRFKAVLDGTDDRFGIDRTDPSFKETPAMREILKEQTLRRKDKRRRKSTKAESASKQKVVPNVSAEATLTSTGGASA-------LSSLVSSLKSK 698          
BLAST of mRNA_H-elongata_contig66498.14247.1 vs. uniprot
Match: A0A1E7F590_9STRA (NUC153 domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F590_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 3.540e-8
Identity = 46/111 (41.44%), Postives = 54/111 (48.65%), Query Frame = 0
Query:   16 IERQAPGQDFTVDVKDERFAAALEG-DTRFGIDRTDSSFKDTEGMRHIL-EERARRRDKRYGTQSGAFSVLRGGTPPANGHDGTTGGVLGARGGMKDKGDLSSLVSKLKSR 124
            I     G  F VD KD RF A L+G D RFGID+TD SFKDT  MR I+ E+  RR++KR        + +    P  N          GA         LS LV KLKSR
Sbjct:  670 IAADVSGSSFKVDTKDNRFQAVLDGSDARFGIDKTDPSFKDTSAMREIISEQNMRRKNKRQKKAQPMENAV----PDVNADSSKGVKTSGANA-------LSFLVQKLKSR 769          
BLAST of mRNA_H-elongata_contig66498.14247.1 vs. uniprot
Match: A0A0F4YFT1_TALEM (Pre-rRNA processing protein Esf1 n=1 Tax=Rasamsonia emersonii CBS 393.64 TaxID=1408163 RepID=A0A0F4YFT1_TALEM)

HSP 1 Score: 53.1 bits (126), Expect = 1.710e-5
Identity = 28/54 (51.85%), Postives = 35/54 (64.81%), Query Frame = 0
Query:   17 ERQAPGQDFTVDVKDERFAAALEGDTRFGIDRTDSSFKDTEGMRHILEERARRR 70
            + +APG DF +DV D RFA+  E    F ID T+  FKDT GMR +LEE  +RR
Sbjct:  625 DEKAPGDDFEIDVNDPRFASLYENH-EFAIDPTNPRFKDTAGMRALLEEGRKRR 677          
BLAST of mRNA_H-elongata_contig66498.14247.1 vs. uniprot
Match: A0A060SBM7_PYCCI (NUC153 domain-containing protein n=2 Tax=Trametes TaxID=5324 RepID=A0A060SBM7_PYCCI)

HSP 1 Score: 52.4 bits (124), Expect = 3.160e-5
Identity = 31/66 (46.97%), Postives = 41/66 (62.12%), Query Frame = 0
Query:   23 QDFTVDVKDERFAAALEGDTRFGIDRTDSSFKDTEGMRHILEERARRRDKRYGTQSGAFSVLRGGT 88
            QDFT++VKDERF A LE  T F ID ++  FK T+ M  +LEER+RR+ ++        S  RG T
Sbjct:  616 QDFTINVKDERFQAVLEDHT-FAIDPSNPHFKKTKNMAALLEERSRRQQEKASQNRETTSSARGET 680          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig66498.14247.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LFV7_ECTSI1.240e-2155.46Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
B7GAK3_PHATC6.260e-1045.71Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A1E7F590_9STRA3.540e-841.44NUC153 domain-containing protein n=1 Tax=Fragilari... [more]
A0A0F4YFT1_TALEM1.710e-551.85Pre-rRNA processing protein Esf1 n=1 Tax=Rasamsoni... [more]
A0A060SBM7_PYCCI3.160e-546.97NUC153 domain-containing protein n=2 Tax=Trametes ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039754Pre-rRNA-processing protein Esf1PANTHERPTHR12202UNCHARACTERIZEDcoord: 18..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig66498contigH-elongata_contig66498:1578..2769 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig66498.14247.1mRNA_H-elongata_contig66498.14247.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig66498 1578..3274 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig66498.14247.1 ID=prot_H-elongata_contig66498.14247.1|Name=mRNA_H-elongata_contig66498.14247.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=132bp
MHTNIFVSWLTYRLNIERQAPGQDFTVDVKDERFAAALEGDTRFGIDRTD
SSFKDTEGMRHILEERARRRDKRYGTQSGAFSVLRGGTPPANGHDGTTGG
VLGARGGMKDKGDLSSLVSKLKSRGLGVGGHS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039754Esf1