mRNA_H-elongata_contig66469.14242.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig66469.14242.1 vs. uniprot
Match: A0A6H5JZ73_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ73_9PHAE) HSP 1 Score: 235 bits (600), Expect = 3.200e-74 Identity = 135/209 (64.59%), Postives = 151/209 (72.25%), Query Frame = 1
Query: 1 LWQICDSGLPTGGFAHSAGLEAAVDQGIVRAKHPGSLIRFVRGALANASALQLPLLTVAFKADSLDAWLEVDSVAHACITGEAARRASLAQGAGLLRATQAMFPLGEQFGRMLGDFRALVRDGVVSTAPHHPTGSRKRS-----------------------------ARGHQAPAFGVVCRALGIGECEAARAFMYLVARDVLSAATR 540
+WQ+CDSGLPTGGFAHS GLEAA QGIVRAKH GSL+RFVRGALANA++LQLPLL A +A +L+AWLEVDSVAHACIT EAARRASLAQGAGLLRA QAMFPLGE+ G ++ +FRALVR G + G R ++ ARGH APAFGVVC ALGI E EAARAFM+LVARDVLSAATR
Sbjct: 39 VWQLCDSGLPTGGFAHSGGLEAAAAQGIVRAKHTGSLLRFVRGALANAASLQLPLLREARRARTLEAWLEVDSVAHACITAEAARRASLAQGAGLLRAAQAMFPLGEECGAIIIEFRALVRRGGSAAFSEAGGGGRDQATSEGKSXXXXXXXXXXXXXXAGAASALVTARGHHAPAFGVVCGALGIEENEAARAFMFLVARDVLSAATR 247
BLAST of mRNA_H-elongata_contig66469.14242.1 vs. uniprot
Match: D7FXQ5_ECTSI (Urease accessory protein UreF n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXQ5_ECTSI) HSP 1 Score: 236 bits (603), Expect = 1.120e-73 Identity = 136/209 (65.07%), Postives = 151/209 (72.25%), Query Frame = 1
Query: 1 LWQICDSGLPTGGFAHSAGLEAAVDQGIVRAKHPGSLIRFVRGALANASALQLPLLTVAFKADSLDAWLEVDSVAHACITGEAARRASLAQGAGLLRATQAMFPLGEQFGRMLGDFRALVRDG---------------VVSTAPHHPTGSRKR--------------SARGHQAPAFGVVCRALGIGECEAARAFMYLVARDVLSAATR 540
LWQ+CDSGLPTGGFAHS GLEAA QGIVRAKH GSL+RFVRGALANA++LQLPLL A +A +L+AWLEVDSVAHACIT EAARRASLAQGAGLLRA QAMFPLGE+ G ++ +FRALVR G S G+ K +ARGH +PAFGVVC ALGI E EAARAFM+LVARDVLSAATR
Sbjct: 25 LWQLCDSGLPTGGFAHSGGLEAAAAQGIVRAKHTGSLLRFVRGALANAASLQLPLLREARRARTLEAWLEVDSVAHACITAEAARRASLAQGAGLLRAAQAMFPLGEECGAIISEFRALVRRGGSAAFSEAXXXXXDQATSEGKSGRNGTEKSRASKKKAGAASALVTARGHHSPAFGVVCGALGIEEDEAARAFMFLVARDVLSAATR 233
BLAST of mRNA_H-elongata_contig66469.14242.1 vs. uniprot
Match: A0A836CDD6_9STRA (Urease accessory protein UreF n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDD6_9STRA) HSP 1 Score: 134 bits (336), Expect = 4.340e-34 Identity = 93/214 (43.46%), Postives = 118/214 (55.14%), Query Frame = 1
Query: 4 WQICDSGLPTGGFAHSAGLEAAVDQGIVRAKHPGSLIRFVRGALANASALQLPLLTVAFKADS------LDAWLEVDSVAHACITGEAARRASLAQGAGLLR-ATQAMFPLGEQFGRMLGDFRALVR-----DGVVSTAPHHPTGSRKRSAR---------------GHQAPAFGVVCRALGIGECEAARAFMYLVARDVLSAATRQAARGSRQ 564
WQ+CDS LPTGGFAHS GLEA+V G V A P L +F++ LANA ALQ+P+L + + L AWL+ D++A+A IT ARRAS AQG LLR A +A+ G G L +FR +R + V P P+ ++ S GH APAFG VC + GI A+R F+Y VARDVLSAA R + G Q
Sbjct: 33 WQLCDSALPTGGFAHSNGLEASVAAGAVSAADPHFLAQFLKSCLANAVALQVPMLRAVWDTGAGGSEGLLKAWLQADALANAVITSHVARRASAAQGCALLRLACEALLCTGAH-GDALTEFRKQLRLSQSANLSVQARPVAPSSLQQHSGAAAKSSGENLLVVWVWGHLAPAFGFVCLSAGIDAAAASRMFLYTVARDVLSAANRLSLIGPMQ 245
BLAST of mRNA_H-elongata_contig66469.14242.1 vs. uniprot
Match: D8RLY9_SELML (Uncharacterized protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RLY9_SELML) HSP 1 Score: 119 bits (299), Expect = 2.330e-29 Identity = 75/181 (41.44%), Postives = 102/181 (56.35%), Query Frame = 1
Query: 1 LWQICDSGLPTGGFAHSAGLEAAVDQGIVRAKHPGSLIRFVRGALANASALQLPLLTVAFKADSLDAWLEVDSVAHACITGEAARRASLAQGAGLLRATQAMFP-LGEQFGRMLGDFRALVRDGVVSTAPHHPTGSRKRSARGHQAPAFGVVCRALGIGECEAARAFMYLVARDVLSAATR 540
+WQ+ DS PTGGFAHS GLEAAV G+V SL F++ L N+ +L LP ++ +FK + W+E+D + +A ++ ARRAS +QG+ LLR ++P L E LG+ R +VR G S GH A FG+VC L + RA++YL RDVLSAATR
Sbjct: 15 VWQLVDSFFPTGGFAHSYGLEAAVQAGLV--SDSKSLDTFIKSTLENSGSLLLPFVSASFKLPDVAGWIELDRLLNATLSNHVARRASSSQGSALLRTAATVYPDLAE-----LGELRGVVRAGRAS---------------GHHAGVFGIVCGLLKLDALTCQRAYLYLTLRDVLSAATR 173
BLAST of mRNA_H-elongata_contig66469.14242.1 vs. uniprot
Match: UPI0007AFCA0F (urease accessory protein F n=1 Tax=Arachis ipaensis TaxID=130454 RepID=UPI0007AFCA0F) HSP 1 Score: 109 bits (272), Expect = 2.650e-25 Identity = 69/179 (38.55%), Postives = 97/179 (54.19%), Query Frame = 1
Query: 4 WQICDSGLPTGGFAHSAGLEAAVDQGIVRAKHPGSLIRFVRGALANASALQLPLLTVAFKADSLDAWLEVDSVAHACITGEAARRASLAQGAGLLRATQAMFPLGEQFGRMLGDFRALVRDGVVSTAPHHPTGSRKRSARGHQAPAFGVVCRALGIGECEAARAFMYLVARDVLSAATR 540
WQ+ DS LPTGGFAHS GLEAAV +V +P L F+ L N +L LP + A + +L+ W +D + A +T E +R+AS++QG+ L+R A+F M A + G VS H AP FG++C LG+ ++ RA+MY+ RDV+SAATR
Sbjct: 23 WQLLDSLLPTGGFAHSFGLEAAVQSNLV--SNPDELKTFIIHVLENTGSLLLPFVHSASVSPNLETWHNLDKILDATLTNEVSRKASISQGSALMRVGSAVFSELPSLKTMRN---ASLGSGTVSF---------------HHAPIFGLICGTLGLDSTDSQRAYMYITMRDVISAATR 181
BLAST of mRNA_H-elongata_contig66469.14242.1 vs. uniprot
Match: A0A444XWC6_ARAHY (Uncharacterized protein n=1 Tax=Arachis hypogaea TaxID=3818 RepID=A0A444XWC6_ARAHY) HSP 1 Score: 111 bits (277), Expect = 4.580e-25 Identity = 70/179 (39.11%), Postives = 97/179 (54.19%), Query Frame = 1
Query: 4 WQICDSGLPTGGFAHSAGLEAAVDQGIVRAKHPGSLIRFVRGALANASALQLPLLTVAFKADSLDAWLEVDSVAHACITGEAARRASLAQGAGLLRATQAMFPLGEQFGRMLGDFRALVRDGVVSTAPHHPTGSRKRSARGHQAPAFGVVCRALGIGECEAARAFMYLVARDVLSAATR 540
WQ+ DS LPTGGFAHS GLEAAV +V +P L F+ L N +L LP + VA + L+ W +D + A +T E +R+AS++QG+ L+R A+F M A + G VS H AP FG++C LG+ ++ RA+MY+ RDV+SAATR
Sbjct: 143 WQLLDSLLPTGGFAHSFGLEAAVQSNLV--SNPDELKTFIIHVLENTGSLLLPFVHVASVSPKLETWHNLDKILDATLTNEVSRKASISQGSALMRVGSAVFSELPSLKTMRN---ASLGSGTVSF---------------HHAPIFGLICGTLGLDSTDSQRAYMYITMRDVISAATR 301
BLAST of mRNA_H-elongata_contig66469.14242.1 vs. uniprot
Match: A0A2R6WM51_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WM51_MARPO) HSP 1 Score: 109 bits (272), Expect = 5.410e-25 Identity = 69/179 (38.55%), Postives = 95/179 (53.07%), Query Frame = 1
Query: 4 WQICDSGLPTGGFAHSAGLEAAVDQGIVRAKHPGSLIRFVRGALANASALQLPLLTVAFKADSLDAWLEVDSVAHACITGEAARRASLAQGAGLLRATQAMFPLGEQFGRMLGDFRALVRDGVVSTAPHHPTGSRKRSARGHQAPAFGVVCRALGIGECEAARAFMYLVARDVLSAATR 540
WQ+ DS PTGGFAHS GLE A G+V SL RF +L N++ L LP + K + + WLE++ + HA +T AR+ASL QG+ LLR +F + +M A +T PHH AP FGV+C LG+ A R+++++ RD+LSAATR
Sbjct: 56 WQLLDSLFPTGGFAHSYGLETAYQGGLV--SDCASLERFAVNSLQNSAGLSLPFVFAGNKFPNTECWLELNKILHAMLTNHVARKASLTQGSALLRTASTVFTEFPELKKMRACSYA-----PTATTPHH-------------APLFGVLCGLLGVDAVTAQRSYLFMGLRDILSAATR 214
BLAST of mRNA_H-elongata_contig66469.14242.1 vs. uniprot
Match: A0A200QTN6_9MAGN (Urease accessory protein UreF n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200QTN6_9MAGN) HSP 1 Score: 107 bits (267), Expect = 1.530e-24 Identity = 70/179 (39.11%), Postives = 99/179 (55.31%), Query Frame = 1
Query: 4 WQICDSGLPTGGFAHSAGLEAAVDQGIVRAKHPGSLIRFVRGALANASALQLPLLTVAFKADSLDAWLEVDSVAHACITGEAARRASLAQGAGLLRATQAMFPLGEQFGRMLGDFRALVRDGVVSTAPHHPTGSRKRSARGHQAPAFGVVCRALGIGECEAARAFMYLVARDVLSAATR 540
WQ+ DS LPTGGFAHS GLEAA+ IV P L +V L N +L LP + A K+ +LD W ++D A +T E +R+AS++QG+ LLR + ++F RM RD ++ + R+ H AP FGVVC LG + RA++++ RDV+S+ATR
Sbjct: 26 WQLIDSILPTGGFAHSFGLEAAMQARIVSG--PEGLETYVIHVLENTGSLLLPFVYAATKSPNLDMWSKLDRTLEATLTNEVSRKASISQGSALLRISASVFSEVPSLKRM--------RDDLLGS----------RTVSFHHAPVFGVVCGLLGFDSGTSQRAYVFMTMRDVISSATR 184
BLAST of mRNA_H-elongata_contig66469.14242.1 vs. uniprot
Match: A0A445BF33_ARAHY (Uncharacterized protein n=6 Tax=Arachis hypogaea TaxID=3818 RepID=A0A445BF33_ARAHY) HSP 1 Score: 109 bits (273), Expect = 2.230e-24 Identity = 68/179 (37.99%), Postives = 97/179 (54.19%), Query Frame = 1
Query: 4 WQICDSGLPTGGFAHSAGLEAAVDQGIVRAKHPGSLIRFVRGALANASALQLPLLTVAFKADSLDAWLEVDSVAHACITGEAARRASLAQGAGLLRATQAMFPLGEQFGRMLGDFRALVRDGVVSTAPHHPTGSRKRSARGHQAPAFGVVCRALGIGECEAARAFMYLVARDVLSAATR 540
WQ+ DS LPTGGFAHS GLEAAV +V +P L F+ L N +L LP + +A + L+ W +D + A +T E +R+AS++QG+ L+R A+F M A + G +S H AP FG++C LG+ ++ RA+MY+ RDV+SAATR
Sbjct: 159 WQLLDSLLPTGGFAHSFGLEAAVQSNLV--SNPDELKTFIIHVLENTGSLLLPFVHLASVSPKLETWHNLDKILDATLTNEVSRKASISQGSALMRVGSAVFSELPSLKTMRN---ASLGSGTISF---------------HHAPIFGLICGTLGLDSTDSQRAYMYITMRDVISAATR 317
BLAST of mRNA_H-elongata_contig66469.14242.1 vs. uniprot
Match: UPI000B8D122B (urease accessory protein F n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8D122B) HSP 1 Score: 106 bits (264), Expect = 3.850e-24 Identity = 70/179 (39.11%), Postives = 99/179 (55.31%), Query Frame = 1
Query: 4 WQICDSGLPTGGFAHSAGLEAAVDQGIVRAKHPGSLIRFVRGALANASALQLPLLTVAFKADSLDAWLEVDSVAHACITGEAARRASLAQGAGLLRATQAMFPLGEQFGRMLGDFRALVRDGVVSTAPHHPTGSRKRSARGHQAPAFGVVCRALGIGECEAARAFMYLVARDVLSAATR 540
WQ+ DS LPTGGFAHS GLEAAV +V P L +V L N +L LP + A + SL+ W ++D + A +T E +R+AS++QG+ L+R +FP F M RD +++ R+ H AP FG++C LGI + RA+M++ RDV+SAATR
Sbjct: 22 WQLLDSILPTGGFAHSFGLEAAVHARVVSC--PQGLQTYVTHVLDNTGSLLLPFVYSAALSPSLETWHKLDRMLDATLTNEVSRKASVSQGSALMRVAATVFPEVPSFKTM--------RDVSLTS----------RAVSFHHAPIFGLICGLLGIDSGTSQRAYMFVTMRDVISAATR 180 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig66469.14242.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig66469.14242.1 >prot_H-elongata_contig66469.14242.1 ID=prot_H-elongata_contig66469.14242.1|Name=mRNA_H-elongata_contig66469.14242.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=199bp LWQICDSGLPTGGFAHSAGLEAAVDQGIVRAKHPGSLIRFVRGALANASAback to top mRNA from alignment at H-elongata_contig66469:784..2615- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig66469.14242.1 ID=mRNA_H-elongata_contig66469.14242.1|Name=mRNA_H-elongata_contig66469.14242.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1832bp|location=Sequence derived from alignment at H-elongata_contig66469:784..2615- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig66469:784..2615- >mRNA_H-elongata_contig66469.14242.1 ID=mRNA_H-elongata_contig66469.14242.1|Name=mRNA_H-elongata_contig66469.14242.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1194bp|location=Sequence derived from alignment at H-elongata_contig66469:784..2615- (Himanthalia elongata Himel1 dioecious)back to top |