prot_H-elongata_contig66362.14234.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig66362.14234.1
Unique Nameprot_H-elongata_contig66362.14234.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length301
Homology
BLAST of mRNA_H-elongata_contig66362.14234.1 vs. uniprot
Match: D8LM11_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM11_ECTSI)

HSP 1 Score: 197 bits (502), Expect = 3.580e-57
Identity = 155/369 (42.01%), Postives = 184/369 (49.86%), Query Frame = 0
Query:    1 QLYLGVYESEVDAAKAHDRAARFHFAENAVCNFESEQEADRQAALHQQRQLVEQQQLVEGHPH-----------AHLHGGSFSVGREEFDDLEEYHRGLEEA--CSSEDDQC---------------------------------------------CAEGD-SEESGDAYGEDCT-----RSSRSMSSSSASGVS---MLDDLNQIATTKSYLGREVAATIAAVAAHTPISATASIIVPRPAPSGVVMGGG--EVHVPRRDVPQRARCSSGMSSCESDSDFAGVTTSALLEPPAPEGMGFPYAEDLLGYEMQSWFCCEDEDDHHGWGFDGLAPTSSNGWSRSSSGSMSSSLSCDDDYIPSALPPLMGI 300
            +LYLGVYESEVDAAKAHDRAARFHFA++AVCNF+SE EADRQA +H+QRQL+                      A LHGGSFSVGREEFDDLEEYHRG++EA  CSSE+D                                                AEGD S+E GD Y ED        S RSMS S +S +S   M D                                                    ++H  + +  QR RCSSG S C SD     +     +     EGMGFP AEDLLGYEMQSW+CC+D+++       G   T S+G SR+SSGSMSSSLSCDD+Y+ SALPPLMG+
Sbjct:   18 KLYLGVYESEVDAAKAHDRAARFHFADSAVCNFDSEHEADRQAVIHKQRQLLXXXXXXXXXXXXXXXXXXXXXXAQLHGGSFSVGREEFDDLEEYHRGMDEATTCSSEEDDGEGLDNDESLHGDDIDDDIEDSVHGGEEEDHRRGRLDXXXXXXELPAAEGDMSDEGGDRYEEDGVIGGGGTSGRSMSCSYSSAMSTGSMSDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLHAQQLEQ-QRGRCSSGESDCSSDFVTPSLLREESMSSTTQEGMGFPVAEDLLGYEMQSWYCCQDDEERSPSTSGG---TYSDGGSRASSGSMSSSLSCDDEYVSSALPPLMGM 382          
BLAST of mRNA_H-elongata_contig66362.14234.1 vs. uniprot
Match: A0A6H5JUY3_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUY3_9PHAE)

HSP 1 Score: 189 bits (480), Expect = 2.150e-52
Identity = 162/421 (38.48%), Postives = 189/421 (44.89%), Query Frame = 0
Query:    1 QLYLGVYESEVDAAKAHDRAARFHFAENAVCNFESEQEADRQAALHQQRQLVEQQQLVEGHPH-----------AHLHGGSFSVGREEFDDLEEYHRGLEEA--CSSEDDQC-----------------------------------------------CAEGD-SEESGDAYGEDCT-----RSSRSMSSSSASGVSM---------LDDLNQIATTKSYLGREVAATIAAVAAHTPISATASIIVPRPAPSGVVMGGGEVHVPRRDVPQRARCSSGMSSCESDSDFAGVTTSALLEPPAPEGMGFPYAEDLLGYEMQSWFCCEDEDDHH----------------------------------------------GWGFDGLAPTSSNGWSRSSSGSMSSSLSCDDDYIPSALPPLMGI 300
            QLYLGVYESEVDAAKAHDRAARFHFA++AVCNF+SE EADRQA +H+QRQL+                      A LHGGSFSVGREEFDDLEEYHRG++EA  CSSE+D                                                  AE D S+E GD Y ED        S RSMS S +S +S                          EVA T+A  +A                         ++H  + +  QR RCSSG S C S+     +     L     EGMGFP AEDLLGYEMQSW+CC+                                                    GWGF   A   S+G SR+SSGSMSSSLSCDD+Y+PSALPPLMG+
Sbjct:  128 QLYLGVYESEVDAAKAHDRAARFHFADSAVCNFDSEHEADRQAVIHKQRQLLXXXXXXXXXXXXXXXXXXXXXXAQLHGGSFSVGREEFDDLEEYHRGMDEATTCSSEEDDGEGLDNEESLHGDDIDDDIDDSVHGEEEDHRRGRXXXRLNGDDDDELPAAECDMSDEGGDRYEEDGVIGGGGSSGRSMSCSYSSAMSTGXXXXXXXXXXXXXXXXXXXXXXXXEVA-TVADGSAFXXXXXXXXXXXXXXXXXXXXXXX-DLHTQQLEQ-QRGRCSSGESDCSSEFVTPSLLREESLSSTTQEGMGFPVAEDLLGYEMQSWYCCQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEELWGTAVGANLGWGFGDFAQMYSDGGSRASSGSMSSSLSCDDEYVPSALPPLMGM 545          
BLAST of mRNA_H-elongata_contig66362.14234.1 vs. uniprot
Match: D7FZ71_ECTSI (AP2/ERF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ71_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 6.220e-8
Identity = 30/41 (73.17%), Postives = 36/41 (87.80%), Query Frame = 0
Query:    1 QLYLGVYESEVDAAKAHDRAARFHFAENAVCNFESEQEADR 41
            QLYLGVYESE++AAKAHDRAARFHF + ++ NF +E EADR
Sbjct:  164 QLYLGVYESELEAAKAHDRAARFHFPDKSMTNFATEAEADR 204          
BLAST of mRNA_H-elongata_contig66362.14234.1 vs. uniprot
Match: A0A6H5LCQ5_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCQ5_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 6.980e-8
Identity = 30/41 (73.17%), Postives = 36/41 (87.80%), Query Frame = 0
Query:    1 QLYLGVYESEVDAAKAHDRAARFHFAENAVCNFESEQEADR 41
            QLYLGVYESE++AAKAHDRAARFHF + ++ NF +E EADR
Sbjct:  151 QLYLGVYESELEAAKAHDRAARFHFPDKSMTNFATEAEADR 191          
BLAST of mRNA_H-elongata_contig66362.14234.1 vs. uniprot
Match: A0A836CH07_9STRA (AP2/ERF domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH07_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 2.940e-7
Identity = 26/33 (78.79%), Postives = 29/33 (87.88%), Query Frame = 0
Query:    1 QLYLGVYESEVDAAKAHDRAARFHFAENAVCNF 33
            QLYLGV+ESEVDAAKAHDRAAR HF + A+ NF
Sbjct:   22 QLYLGVFESEVDAAKAHDRAARQHFGDQAMVNF 54          
BLAST of mRNA_H-elongata_contig66362.14234.1 vs. uniprot
Match: A0A836CI56_9STRA (AP2/ERF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI56_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 3.480e-6
Identity = 25/33 (75.76%), Postives = 29/33 (87.88%), Query Frame = 0
Query:    1 QLYLGVYESEVDAAKAHDRAARFHFAENAVCNF 33
            QLYLGV+ESE+DAAKAHDRAAR+HF   A+ NF
Sbjct:   52 QLYLGVFESEIDAAKAHDRAARYHFGAQAMVNF 84          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig66362.14234.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LM11_ECTSI3.580e-5742.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JUY3_9PHAE2.150e-5238.48AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. ... [more]
D7FZ71_ECTSI6.220e-873.17AP2/ERF domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5LCQ5_9PHAE6.980e-873.17AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. ... [more]
A0A836CH07_9STRA2.940e-778.79AP2/ERF domain-containing protein (Fragment) n=1 T... [more]
A0A836CI56_9STRA3.480e-675.76AP2/ERF domain-containing protein n=1 Tax=Tribonem... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10coord: 1..36
e-value: 4.8E-5
score: 25.1
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 1..34
score: 8.531
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 2..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig66362contigH-elongata_contig66362:2362..3348 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig66362.14234.1mRNA_H-elongata_contig66362.14234.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig66362 2362..3348 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig66362.14234.1 ID=prot_H-elongata_contig66362.14234.1|Name=mRNA_H-elongata_contig66362.14234.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=301bp
QLYLGVYESEVDAAKAHDRAARFHFAENAVCNFESEQEADRQAALHQQRQ
LVEQQQLVEGHPHAHLHGGSFSVGREEFDDLEEYHRGLEEACSSEDDQCC
AEGDSEESGDAYGEDCTRSSRSMSSSSASGVSMLDDLNQIATTKSYLGRE
VAATIAAVAAHTPISATASIIVPRPAPSGVVMGGGEVHVPRRDVPQRARC
SSGMSSCESDSDFAGVTTSALLEPPAPEGMGFPYAEDLLGYEMQSWFCCE
DEDDHHGWGFDGLAPTSSNGWSRSSSGSMSSSLSCDDDYIPSALPPLMGI
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036955AP2/ERF_dom_sf
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf