mRNA_H-elongata_contig11846.1423.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig11846.1423.1
Unique NamemRNA_H-elongata_contig11846.1423.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig11846.1423.1 vs. uniprot
Match: D7FW08_ECTSI (Proteasome subunit alpha type n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW08_ECTSI)

HSP 1 Score: 453 bits (1165), Expect = 2.550e-160
Identity = 229/248 (92.34%), Postives = 240/248 (96.77%), Query Frame = 1
Query:    1 RYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLIDRARVECQSFRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGQPQIYQTDPAGTYSAWKANAIGGTNSNNMREFLEKNWTNDMDEASAKKLCMKALLEVVDSGAKNMEIAIVRFQKPIEIMTEDKMQAVAAELDAEAEEAKESSPGEVQMT 744
            RYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVL+D+AR+ECQS+RLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDG PQIYQTDPAGTYSAWKANAIGG+NSNNMREFLEKNW NDMDE +AKKLCMKALLEVVDSGAKNMEIAIVRF K  E+MTE+ MQAVAAEL+AEAEEAKE+S G+VQMT
Sbjct:    4 RYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGTPQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKNWANDMDEGAAKKLCMKALLEVVDSGAKNMEIAIVRFGKANEMMTEEMMQAVAAELEAEAEEAKEASAGDVQMT 251          
BLAST of mRNA_H-elongata_contig11846.1423.1 vs. uniprot
Match: A0A6S9E6K7_HETAK (Proteasome subunit alpha type n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9E6K7_HETAK)

HSP 1 Score: 376 bits (966), Expect = 5.080e-130
Identity = 182/237 (76.79%), Postives = 213/237 (89.87%), Query Frame = 1
Query:    4 YDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLIDRARVECQSFRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGQPQIYQTDPAGTYSAWKANAIGGTNSNNMREFLEKNWTNDMDEASAKKLCMKALLEVVDSGAKNMEIAIVRFQKPIEIMTEDKMQAVAAELDAEAEEAK 714
            YDRAITVFSPDGHLFQVEYA+EAVKRGSSVV ++GKDCV+LGVER++TAKLQD RT+RKI K+D+H+TLAFAGLTADARVL+++AR+ECQS+RLTCEDAPS+EYVARF+ARTQQ+YTQRGGMRPFGVS +LAG   DG PQ+YQTDPAGTYSAWK N IGG NS +M+EFLEKNW  DMD  +AKKL +K LLEVVDSGAKNME+ +VR  +P E+MTE+ M AVAAE++AEAEEAK
Sbjct:    3 YDRAITVFSPDGHLFQVEYAMEAVKRGSSVVGIRGKDCVILGVERKSTAKLQDSRTVRKICKVDNHLTLAFAGLTADARVLVNKARLECQSYRLTCEDAPSVEYVARFVARTQQKYTQRGGMRPFGVSVMLAGHGVDGAPQLYQTDPAGTYSAWKGNCIGGKNSKSMQEFLEKNWEEDMDAPAAKKLAIKCLLEVVDSGAKNMEVCVVRRGQPNEMMTEEAMSAVAAEIEAEAEEAK 239          
BLAST of mRNA_H-elongata_contig11846.1423.1 vs. uniprot
Match: A0A835Z7L7_9STRA (Proteasome subunit alpha type n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7L7_9STRA)

HSP 1 Score: 374 bits (959), Expect = 6.800e-129
Identity = 188/249 (75.50%), Postives = 219/249 (87.95%), Query Frame = 1
Query:    4 YDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLIDRARVECQSFRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGQPQIYQTDPAGTYSAWKANAIGGTNSNNMREFLEKNWTND--MDEASAKKLCMKALLEVVDSGAKNMEIAIVRFQKPIEIMTEDKMQAVAAELDAEAEEAKESSPGEVQMT 744
            YDRAITVFSPDGHLFQVEYAIEAVKRGSSVV V+  D +V+GVERRATAKLQDPRTIRKIVK+D+H+TLAFAGLTADARVLID+AR+E QS+RLTCEDAPS+EY+ARFIARTQQ+YTQRGGMRPFGVS +LAGF  DGQPQ+YQTDPAGT+SAWKANAIGG +S NMREFLEKN+  +  +DEA+A KLC+K LLEVVDSGAKNMEI ++R   P+E M++  M AV A+++AEAEEAK++S G    T
Sbjct:    5 YDRAITVFSPDGHLFQVEYAIEAVKRGSSVVGVRAADMLVVGVERRATAKLQDPRTIRKIVKVDAHLTLAFAGLTADARVLIDKARLEAQSYRLTCEDAPSLEYMARFIARTQQKYTQRGGMRPFGVSCMLAGFGTDGQPQLYQTDPAGTHSAWKANAIGGKSSKNMREFLEKNYPTEGGLDEAAAVKLCIKTLLEVVDSGAKNMEICLIRRDTPVETMSDTDMAAVVAQIEAEAEEAKKASAGSSMET 253          
BLAST of mRNA_H-elongata_contig11846.1423.1 vs. uniprot
Match: W7TRL4_9STRA (Proteasome subunit alpha type n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRL4_9STRA)

HSP 1 Score: 346 bits (888), Expect = 4.350e-118
Identity = 167/241 (69.29%), Postives = 209/241 (86.72%), Query Frame = 1
Query:    1 RYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLIDRARVECQSFRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGQPQIYQTDPAGTYSAWKANAIGGTNSNNMREFLEKNWTNDMDEASAKKLCMKALLEVVDSGAKNMEIAIVRFQKPIEIMTEDKMQAVAAELDAEAEEAKESS 723
            RYDRAITVFSPDGHLFQVEYAIEAVKRGSS V V+GK  V+LGVERRATAKLQDPRTI+KI KID H+TLAFAGLTADARVL+++AR+ECQS+RLT EDAP++EYVAR+IARTQQ+YTQRGG+RPFGVS ++AG + DG   +YQTDPAGTYSAWKA A+GG NS+NM+E+LEK W +D++E +A +L +K LLEVVDSGAKNME+A++   +P+ ++ E  + A++A ++AE EEAK+ +
Sbjct:    4 RYDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKSSVILGVERRATAKLQDPRTIKKICKIDEHVTLAFAGLTADARVLVNKARLECQSYRLTYEDAPTVEYVARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDGSAVLYQTDPAGTYSAWKATAVGGRNSSNMQEYLEKQWADDLEEENAIRLTVKTLLEVVDSGAKNMEVAVITQGRPMRMLDEATLAALSASIEAEQEEAKKKA 244          
BLAST of mRNA_H-elongata_contig11846.1423.1 vs. uniprot
Match: A0A7S2RQS1_9STRA (Proteasome subunit alpha type n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RQS1_9STRA)

HSP 1 Score: 342 bits (876), Expect = 3.340e-116
Identity = 166/238 (69.75%), Postives = 199/238 (83.61%), Query Frame = 1
Query:    1 RYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLIDRARVECQSFRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGQPQIYQTDPAGTYSAWKANAIGGTNSNNMREFLEKNWTNDMDEASAKKLCMKALLEVVDSGAKNMEIAIVRFQKPIEIMTEDKMQAVAAELDAEAEEAK 714
            RYDRAITVFSPDG LFQ++YA EAVK+ S+VV V+  D V+LGVER+  AKLQDPRTIRKIVK+D+H TLAFAGL ADARVLI++ R+ECQS+RLTCEDAPS+EY+ARFIARTQQRYTQRGG+RPFGVSSILAGF+ DG PQIYQ DP+GTY  WKANAIGG N   MREFLEK W   + +A A KL +KALLEVVDSG+KNME+ ++R  +P   M+++ +QAV  +++AE EEAK
Sbjct:    3 RYDRAITVFSPDGKLFQIDYAFEAVKKASAVVAVRAADTVILGVERKTIAKLQDPRTIRKIVKLDTHATLAFAGLNADARVLIEKTRIECQSYRLTCEDAPSLEYIARFIARTQQRYTQRGGVRPFGVSSILAGFNTDGAPQIYQIDPSGTYFGWKANAIGGRNFKGMREFLEKEWQEGLSQAEATKLTVKALLEVVDSGSKNMELVVIRRGEPAATMSDESVQAVVDQVEAEMEEAK 240          
BLAST of mRNA_H-elongata_contig11846.1423.1 vs. uniprot
Match: A0A7S1FT14_9STRA (Proteasome subunit alpha type n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FT14_9STRA)

HSP 1 Score: 338 bits (866), Expect = 7.320e-115
Identity = 165/240 (68.75%), Postives = 203/240 (84.58%), Query Frame = 1
Query:    4 YDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLIDRARVECQSFRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGQPQIYQTDPAGTYSAWKANAIGGTNSNNMREFLEKNWTNDMDEASAKKLCMKALLEVVDSGAKNMEIAIVRFQKPIEIMTEDKMQAVAAELDAEAEEAKESS 723
            YDRAITVFSPDGHLFQVEYA+EAV+RGS+ V ++  D V+L VERRATA+LQD RTIRKIV +D H+ LAFAGLTADARVL+++ARVECQS+RLTCEDAPSIEY+AR+IARTQQ+YTQRGG+RPFG++++LAGFSQ G P +YQTDPAGTYS+WKANA+GG N+ +MREFLEKN  + M E  A KL +KALLEVVDSGAKNMEI++ R    + I+ E+ +  +  E++AEAEE+K  S
Sbjct:    3 YDRAITVFSPDGHLFQVEYAMEAVRRGSATVGIRASDAVILAVERRATARLQDSRTIRKIVSVDDHVRLAFAGLTADARVLVNKARVECQSYRLTCEDAPSIEYIARYIARTQQKYTQRGGVRPFGITTLLAGFSQSGSPCLYQTDPAGTYSSWKANAVGGRNAKSMREFLEKNCDDSMSETDAVKLAVKALLEVVDSGAKNMEISVSRKNSSV-ILEEEVVDKIVKEIEAEAEESKTGS 241          
BLAST of mRNA_H-elongata_contig11846.1423.1 vs. uniprot
Match: A0A7S3M1D5_9STRA (Proteasome subunit alpha type n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M1D5_9STRA)

HSP 1 Score: 337 bits (865), Expect = 1.420e-114
Identity = 163/242 (67.36%), Postives = 207/242 (85.54%), Query Frame = 1
Query:    4 YDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLIDRARVECQSFRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGQPQIYQTDPAGTYSAWKANAIGGTNSNNMREFLEKNWTNDMDEASAKKLCMKALLEVVDSGAKNMEIAIVRFQKPIEIMTEDKMQAVAAELDAEAEEAKESSPG 729
            YDRAITVFSPDGHLFQVEYA+EAVKRGS+VV V+G D VVLGVER+A A+LQD RTIRKI K+D ++T+AFAG TADARVLI++AR+E QS+RLTCEDAPSI+Y+AR IA+TQQ YTQRGG+RPFGVSS+++GF+ D  PQ+Y TDPAGTYSAWKANAIGG N   ++EFLEKNWT  + EA A +L +KALLEVVDSG+KNME+A+ R+ +P+ I+ E++++ + A+++ E EEAK+ + G
Sbjct:    3 YDRAITVFSPDGHLFQVEYAMEAVKRGSAVVGVRGADSVVLGVERKAVAQLQDARTIRKIAKLDENLTIAFAGFTADARVLIEKARIEAQSYRLTCEDAPSIDYMARHIAKTQQSYTQRGGVRPFGVSSMISGFNADKSPQLYLTDPAGTYSAWKANAIGGRNEKAVQEFLEKNWTASLAEADAIRLTVKALLEVVDSGSKNMELAVSRYGQPVRILKEEELEVIIADIEREIEEAKKEAAG 244          
BLAST of mRNA_H-elongata_contig11846.1423.1 vs. uniprot
Match: A0A7S2F6I3_9STRA (Proteasome subunit alpha type n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F6I3_9STRA)

HSP 1 Score: 336 bits (862), Expect = 5.740e-114
Identity = 167/237 (70.46%), Postives = 198/237 (83.54%), Query Frame = 1
Query:    4 YDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLIDRARVECQSFRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGQPQIYQTDPAGTYSAWKANAIGGTNSNNMREFLEKNWTNDMDEASAKKLCMKALLEVVDSGAKNMEIAIVRFQKPIEIMTEDKMQAVAAELDAEAEEAK 714
            YDRAITVFSPDG LFQ++YA EAVK+ S+VV V G++ VV+GVER+A AKLQ+ RTIRKIVK+DSH TLAFAGLTADARVLI++AR ECQS+RLTCEDAPS+EY+ARFIA+TQQRYTQRGG+RPFGVSSILAGF  DG P IYQ DP+GTY AWKANAIGG N   MREFLEK W  D++EA A KL +KALLEVVDSG+KNME+ +VR     E + ++ + A+  E++AE EEAK
Sbjct:   17 YDRAITVFSPDGKLFQIDYAFEAVKKASAVVAVTGENVVVIGVERKAIAKLQESRTIRKIVKLDSHATLAFAGLTADARVLIEKARTECQSYRLTCEDAPSLEYIARFIAKTQQRYTQRGGVRPFGVSSILAGFHTDGSPSIYQIDPSGTYFAWKANAIGGRNFKPMREFLEKEWVPDLEEAQALKLTVKALLEVVDSGSKNMEVVVVRRGAGPETLDDEALTAIVTEVEAEQEEAK 253          
BLAST of mRNA_H-elongata_contig11846.1423.1 vs. uniprot
Match: A0A7S2EX89_TRICV (Proteasome subunit alpha type n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EX89_TRICV)

HSP 1 Score: 332 bits (850), Expect = 3.120e-112
Identity = 170/253 (67.19%), Postives = 203/253 (80.24%), Query Frame = 1
Query:    4 YDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLIDRARVECQSFRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFS---------QDGQ--PQIYQTDPAGTYSAWKANAIGGTNSNNMREFLEKNWTNDMDEASAKKLCMKALLEVVDSGAKNMEIAIVRFQKPIEIMTEDKMQAVAAELDAEAEEAKESSPG 729
            YDRAITVFSPDGHLFQVEYA+EAV+RGS+ V V+GKDCVVL VERRA AKLQDPRTIRKIV +D   TLAFAGLTADARVL+++ARVECQS+RLTCEDAPS+EYVAR++ARTQQ+YTQRGG+RPFG++++LAGFS         +DG   P +YQTDPAGT+S+WKA  IGG N+ ++REFLEKN+ + MDE    KL ++ALLEVVDSGAKNMEI +VR     E M E  + AV  E++AE EE K  S G
Sbjct:    3 YDRAITVFSPDGHLFQVEYAMEAVRRGSTAVGVRGKDCVVLAVERRALAKLQDPRTIRKIVPVDERCTLAFAGLTADARVLVNKARVECQSYRLTCEDAPSVEYVARYLARTQQKYTQRGGVRPFGIATLLAGFSDPVQGKEDEEDGGSGPVLYQTDPAGTHSSWKAQVIGGRNAKSLREFLEKNYEDGMDEGGCVKLSVRALLEVVDSGAKNMEICVVRRGGVRETMEESAVDAVVKEIEAEQEEGKRGSTG 255          
BLAST of mRNA_H-elongata_contig11846.1423.1 vs. uniprot
Match: B8BR42_THAPS (Proteasome subunit alpha type n=2 Tax=Thalassiosira TaxID=35127 RepID=B8BR42_THAPS)

HSP 1 Score: 329 bits (844), Expect = 1.740e-111
Identity = 161/242 (66.53%), Postives = 197/242 (81.40%), Query Frame = 1
Query:    4 YDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLIDRARVECQSFRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGQPQIYQTDPAGTYSAWKANAIGGTNSNNMREFLEKNWTNDMDEASAKKLCMKALLEVVDSGAKNMEIAIVRFQKPIEIMTEDKMQAVAAELDAEAEEAKESSPG 729
            YDRAITVFSPDGHLFQVEYA+EAV+RGS+ V V+GKDCVVL VERRA AKLQDPRTIRKIV +D    LAFAGLTADARVLI++ R E QS+RLTCEDAPS+EY+AR+IARTQQ+YTQRGG+RPFG++++LAGFS++G P +YQTDPAGT+S WKA  IGG N+ ++REFLEKNW   ++E  A ++ ++ALLEVVDSGAKNMEI +VR      I+ E  +  +   ++AEAEE K S  G
Sbjct:    3 YDRAITVFSPDGHLFQVEYAMEAVRRGSTAVGVRGKDCVVLAVERRALAKLQDPRTIRKIVSVDERSVLAFAGLTADARVLINKTRTEAQSYRLTCEDAPSVEYLARYIARTQQKYTQRGGVRPFGIATLLAGFSEEGSPVLYQTDPAGTHSEWKAQVIGGRNAKSLREFLEKNWEEGLEEDKAVRMSVQALLEVVDSGAKNMEICVVRVGGKKTILEEKDVDEIVKSIEAEAEEGKTSGGG 244          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11846.1423.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FW08_ECTSI2.550e-16092.34Proteasome subunit alpha type n=2 Tax=Ectocarpus T... [more]
A0A6S9E6K7_HETAK5.080e-13076.79Proteasome subunit alpha type n=2 Tax=Heterosigma ... [more]
A0A835Z7L7_9STRA6.800e-12975.50Proteasome subunit alpha type n=1 Tax=Tribonema mi... [more]
W7TRL4_9STRA4.350e-11869.29Proteasome subunit alpha type n=2 Tax=Monodopsidac... [more]
A0A7S2RQS1_9STRA3.340e-11669.75Proteasome subunit alpha type n=1 Tax=Rhizochromul... [more]
A0A7S1FT14_9STRA7.320e-11568.75Proteasome subunit alpha type n=1 Tax=Corethron hy... [more]
A0A7S3M1D5_9STRA1.420e-11467.36Proteasome subunit alpha type n=1 Tax=Spumella elo... [more]
A0A7S2F6I3_9STRA5.740e-11470.46Proteasome subunit alpha type n=2 Tax=Dictyocha sp... [more]
A0A7S2EX89_TRICV3.120e-11267.19Proteasome subunit alpha type n=1 Tax=Trieres chin... [more]
B8BR42_THAPS1.740e-11166.53Proteasome subunit alpha type n=2 Tax=Thalassiosir... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11846contigH-elongata_contig11846:131..3229 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score452.2
Seed ortholog evalue1.6e-124
Seed eggNOG ortholog2880.D7FW08
Preferred namePSMA7
KEGG koko:K01191,ko:K02731
KEGG Pathwayko00511,ko03050,map00511,map03050
KEGG ModuleM00337,M00340
GOsGO:0000502,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005773,GO:0005774,GO:0005819,GO:0005829,GO:0005839,GO:0005840,GO:0005856,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0007088,GO:0007346,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009507,GO:0009524,GO:0009536,GO:0009896,GO:0009987,GO:0010498,GO:0010499,GO:0010564,GO:0010638,GO:0010965,GO:0012505,GO:0015630,GO:0016020,GO:0016579,GO:0019538,GO:0019773,GO:0019941,GO:0022626,GO:0030071,GO:0030163,GO:0031090,GO:0031331,GO:0031597,GO:0031974,GO:0031981,GO:0032270,GO:0032436,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0034399,GO:0034515,GO:0036211,GO:0042175,GO:0042802,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043632,GO:0043687,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044456,GO:0044464,GO:0045202,GO:0045732,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045931,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051128,GO:0051130,GO:0051247,GO:0051603,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0062033,GO:0065007,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0090068,GO:0098588,GO:0098794,GO:0098805,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1903052,GO:1903364,GO:1905368,GO:1905369,GO:1905818,GO:1905820,GO:1990111,GO:1990904,GO:2001252
EggNOG free text desc.threonine-type endopeptidase activity
EggNOG OGsCOG0638@1,KOG0183@2759
EC3.2.1.24,3.4.25.1
COG Functional cat.O
CAZyGH38
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03051,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionproteasome subunit alpha type 7
Ec32 orthologEc-01_002900.1
Exons7
Model size747
Cds size747
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929691.992585-CDS-H-elongata_contig11846:130..2111622929691.992585-CDS-H-elongata_contig11846:130..211Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11846 131..211 +
1691679120.805287-CDS-H-elongata_contig11846:130..2111691679120.805287-CDS-H-elongata_contig11846:130..211Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11846 131..211 +
1622929692.0145478-CDS-H-elongata_contig11846:736..8951622929692.0145478-CDS-H-elongata_contig11846:736..895Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11846 737..895 +
1691679120.816845-CDS-H-elongata_contig11846:736..8951691679120.816845-CDS-H-elongata_contig11846:736..895Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11846 737..895 +
1622929692.0358453-CDS-H-elongata_contig11846:1461..15311622929692.0358453-CDS-H-elongata_contig11846:1461..1531Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11846 1462..1531 +
1691679120.82581-CDS-H-elongata_contig11846:1461..15311691679120.82581-CDS-H-elongata_contig11846:1461..1531Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11846 1462..1531 +
1622929692.0536923-CDS-H-elongata_contig11846:1814..19391622929692.0536923-CDS-H-elongata_contig11846:1814..1939Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11846 1815..1939 +
1691679120.8349245-CDS-H-elongata_contig11846:1814..19391691679120.8349245-CDS-H-elongata_contig11846:1814..1939Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11846 1815..1939 +
1622929692.081869-CDS-H-elongata_contig11846:2382..25201622929692.081869-CDS-H-elongata_contig11846:2382..2520Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11846 2383..2520 +
1691679120.8439918-CDS-H-elongata_contig11846:2382..25201691679120.8439918-CDS-H-elongata_contig11846:2382..2520Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11846 2383..2520 +
1622929692.098346-CDS-H-elongata_contig11846:2875..29501622929692.098346-CDS-H-elongata_contig11846:2875..2950Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11846 2876..2950 +
1691679120.8536906-CDS-H-elongata_contig11846:2875..29501691679120.8536906-CDS-H-elongata_contig11846:2875..2950Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11846 2876..2950 +
1622929692.1093826-CDS-H-elongata_contig11846:3130..32291622929692.1093826-CDS-H-elongata_contig11846:3130..3229Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11846 3131..3229 +
1691679120.8622994-CDS-H-elongata_contig11846:3130..32291691679120.8622994-CDS-H-elongata_contig11846:3130..3229Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11846 3131..3229 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11846.1423.1prot_H-elongata_contig11846.1423.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig11846 131..3229 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig11846.1423.1

>prot_H-elongata_contig11846.1423.1 ID=prot_H-elongata_contig11846.1423.1|Name=mRNA_H-elongata_contig11846.1423.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=249bp
RYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATA
KLQDPRTIRKIVKIDSHITLAFAGLTADARVLIDRARVECQSFRLTCEDA
PSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGQPQIYQTDPAG
TYSAWKANAIGGTNSNNMREFLEKNWTNDMDEASAKKLCMKALLEVVDSG
AKNMEIAIVRFQKPIEIMTEDKMQAVAAELDAEAEEAKESSPGEVQMT*
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mRNA from alignment at H-elongata_contig11846:131..3229+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig11846.1423.1 ID=mRNA_H-elongata_contig11846.1423.1|Name=mRNA_H-elongata_contig11846.1423.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3099bp|location=Sequence derived from alignment at H-elongata_contig11846:131..3229+ (Himanthalia elongata Himel1 dioecious)
AGGTACGACCGTGCCATTACGGTGTTTTCGCCTGATGGTCATCTCTTTCA GGTGGAATACGCCATTGAGGCCGTGAAGAGGGTAAGACAATAATTAGAGC CTATATATATATATATATATATTTGCTCCTTGACTTTTTTACTTTGCTGC AGGAAGCGGCACGACGCTACAAGGGGCAAAACTTGAAAATTCAAAATTCG CAGTCTGTTGTCTGTAGGGCTTTTGTGTTTTTTAGAAGTAGGTTATTCGC TAGACGACACCAGACGCGTGTTACATGGGGTGAGTCTACCATTGCGTAAA GTCCGTTCAGTCGAGGGGTGAGCCGTTGGAAAACTTTCATACTCTACCTC GCGACGCGCTTTCGGTAGACAGCAATCATAAGCAAAGGCGTGAGAGGGTT GGAGTATTATATTTTAAAGATGTATCGGTAAGATGGCTTTTGCTCTCTCT CAACCCGGTGAGTACAATGGTTCTGCCCAGAAGACAGACCTGAGCTTTCC GCTCGAAGTTCTCTCTCATTTTTTTTCTCTACCCTTGATGCGAATTCATG TCAATCGCTTTCCCACTCTCTCTTCCACGACAACACAAACCTCCACCGCG ATACAGGGATCATCTGTAGTGTGCGTCAAGGGAAAGGACTGCGTGGTGCT GGGGGTGGAGCGGCGGGCAACGGCCAAGCTCCAGGATCCTCGCACGATTC GCAAGATCGTGAAGATCGACAGCCACATCACGCTGGCCTTTGCCGGCCTT ACCGCCGACGCAAGGGTGAGAAAAGGAAAGTAGGGAAGCCCTTGTGCTTG CACTCTGCAGCTCACCCGCCTGCACCCTCTGGGTTTCGGTTTCAGTGGGT CTGTTGGCTGCGCTTGTTCTCGTGTTACAGTAGAGTTTTGCGGCATGTCG TACGGCACGACGTGTGCCGCTTGAGATGGGGCGATCCGAGCGTATCGGAA GAGCGCACCCTTGTCGGAGTCCGCGCCTTCGTCTGGGGCCTAATCGCGAA GCTTCACTTACGCAACATGGCGTGACGTGACATGCCTCTCTGAAGCGCAA GTGCTGGGGATGGCATAGGGTGGGATGGTCTGATTTTCATTTCCAGACAA GTAAAAAGGCGTTCACAGAGCAGTGTTGAGAGGGTCGCTTTTTAGTGCAA GTACGTCGGAGATTCTACCTTCGCTCGGAGACCACCGACGACACGAAGGG AAATGAACGAGTTTTGGCCCTCTAAATGTTGTTTTGTGTGCGTGGCGTCC CTTTGTTTCAAGACGTGACTTCTCGCGCTCTTAAACACGATCCGTGTTCT CCTCGGCCGCCACCCCCGCTCTCTCTCCCAGGTGCTCATCGACAGGGCGC GGGTTGAGTGCCAAAGCTTCCGGCTCACGTGCGAGGATGCTCCTTCCATC GGTGAGACCGCTCAGATGACGTTAAAGCGACACCACTCATCCATGCCAGC CCTGATTGTGCTCCGCACGACGAGCAACTTGCTGGCCGCCCCCCATGTCT GCACCTGTCCTGTATCTGGATCCAGTGGTGCGGGTCAGAGATAGGCCCGA ACATCACTCGTGCGACACAATGCAAAGCCTGTCGACATACCCTGCGACCC GTGCGCTCCCGCCCGTATTTTCCGTTCGCTTACCTTGCTTCTCGTTTGCT GGACCGTCGTTGTTTTTCCCGTCCAATTTGGCAGAGTACGTGGCGCGATT CATCGCCCGCACGCAGCAGCGCTATACACAGCGCGGCGGGATGCGACCCT TTGGCGTGTCTTCAATCTTGGCTGGCTTCTCGCAGGATGGACAACCACAG ATCTACCAGGTGCGTGCGTGCTCCGCGCTTGCCGCCTTGGTTGTAATGTC TTAAGTTCTTTCGCGGAAAAGTATGGCGCACTCCCCAAAAGTAAAACCCT GTCCGGGTAGGTATGTGAGGAGATTTCACGCGTTTGGAAGAATAAGGAAA GTTTTGATGTAACGCGGATGCGTGTGACCTAAAGCGCAGCGCATGCTAGG TCATTCTTGTAATTGAGGAGATCGTTCGTTACTGATGGCCTGCGTGCCTA GTTGAAGCGGCGCTCCTCCCGTTCCTGTTTCCTTTTCTCTTTTGTCAATT TAGTATATGCTTTAAGAACTGAAACGAGGGAGTCCGTTCGTCCGTCTCTT CTGCCCTTGCCTAACCATTGCTTTTGTCTTGGTGCGCGCGCATCGCCAAA CCCCTATCTTGGTTTTACACAACCGACGACCTTGTCCATTGTTTTTTTTA AGACGGACCCAGCGGGCACATACTCGGCCTGGAAGGCTAACGCCATCGGC GGGACCAACAGCAACAATATGCGGGAGTTTTTGGAGAAGAACTGGACGAA CGACATGGACGAGGCGTCGGCTAAGAAGCTGTGCATGAAGGTTAGTCGAT TCAGCGGGTCAGTCCCGGGCGAGGGAATGCAAGGCGGAGCGGTAAAAGGG TAGTTTCGGGAGGCGGCCCCTGTGCGGGGAACCTGATTATGTCGATGCCG CCGCTGCTATCGCCCATTGTTGCATCCAAAACCTCGTTTTCGTTAACTAT TTTTTATCCATATTAGCTAATGGCAATCAATATATATTTATAATAATACG TTTGCTCTTGGTGACATAAGAAACAAGTACCAGCGTTTGCTGTGCCATTA TCTGAATGTAGTGGTTGCGAGCACGAGGCGGGCTCACGCTACGGTGCGTG TCCTTTCTCCCTATGCGCCCATCGACTCTAATTTCCCGACGGCAGGCTTT GCTAGAGGTGGTGGACTCGGGCGCGAAGAATATGGAGATCGCAATCGTGA GGTTCCAGAAGCCCATCGAGGTACGGAAGGCAGGTAGTGCATGCGAAGGC TCCTCTTCTTCCTTTTTAACACTCTGACCCTGTTGCCGTTTGGATGGTCT GCGCACATAGCGCAAGTACAATCAACATGTTTCCCCTCTCGTTTGTGTAA TCCGAAAGGCGCGATTTTTGTCCTTTCAACTCTCCCGCGTATCTTCTCAG ATAATGACAGAGGACAAGATGCAGGCAGTAGCGGCGGAGCTAGACGCGGA GGCGGAAGAGGCTAAGGAATCCTCGCCTGGGGAAGTGCAGATGACCTAA
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Coding sequence (CDS) from alignment at H-elongata_contig11846:131..3229+

>mRNA_H-elongata_contig11846.1423.1 ID=mRNA_H-elongata_contig11846.1423.1|Name=mRNA_H-elongata_contig11846.1423.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1494bp|location=Sequence derived from alignment at H-elongata_contig11846:131..3229+ (Himanthalia elongata Himel1 dioecious)
AGGTACGACCGTGCCATTACGGTGTTTTCGCCTGATGGTCATCTCTTTCA
GGTGGAATACGCCATTGAGGCCGTGAAGAGGAGGTACGACCGTGCCATTA
CGGTGTTTTCGCCTGATGGTCATCTCTTTCAGGTGGAATACGCCATTGAG
GCCGTGAAGAGGGGATCATCTGTAGTGTGCGTCAAGGGAAAGGACTGCGT
GGTGCTGGGGGTGGAGCGGCGGGCAACGGCCAAGCTCCAGGATCCTCGCA
CGATTCGCAAGATCGTGAAGATCGACAGCCACATCACGCTGGCCTTTGCC
GGCCTTACCGCCGACGCAAGGGGATCATCTGTAGTGTGCGTCAAGGGAAA
GGACTGCGTGGTGCTGGGGGTGGAGCGGCGGGCAACGGCCAAGCTCCAGG
ATCCTCGCACGATTCGCAAGATCGTGAAGATCGACAGCCACATCACGCTG
GCCTTTGCCGGCCTTACCGCCGACGCAAGGGTGCTCATCGACAGGGCGCG
GGTTGAGTGCCAAAGCTTCCGGCTCACGTGCGAGGATGCTCCTTCCATCG
GTGCTCATCGACAGGGCGCGGGTTGAGTGCCAAAGCTTCCGGCTCACGTG
CGAGGATGCTCCTTCCATCGAGTACGTGGCGCGATTCATCGCCCGCACGC
AGCAGCGCTATACACAGCGCGGCGGGATGCGACCCTTTGGCGTGTCTTCA
ATCTTGGCTGGCTTCTCGCAGGATGGACAACCACAGATCTACCAGAGTAC
GTGGCGCGATTCATCGCCCGCACGCAGCAGCGCTATACACAGCGCGGCGG
GATGCGACCCTTTGGCGTGTCTTCAATCTTGGCTGGCTTCTCGCAGGATG
GACAACCACAGATCTACCAGACGGACCCAGCGGGCACATACTCGGCCTGG
AAGGCTAACGCCATCGGCGGGACCAACAGCAACAATATGCGGGAGTTTTT
GGAGAAGAACTGGACGAACGACATGGACGAGGCGTCGGCTAAGAAGCTGT
GCATGAAGACGGACCCAGCGGGCACATACTCGGCCTGGAAGGCTAACGCC
ATCGGCGGGACCAACAGCAACAATATGCGGGAGTTTTTGGAGAAGAACTG
GACGAACGACATGGACGAGGCGTCGGCTAAGAAGCTGTGCATGAAGGCTT
TGCTAGAGGTGGTGGACTCGGGCGCGAAGAATATGGAGATCGCAATCGTG
AGGTTCCAGAAGCCCATCGAGGCTTTGCTAGAGGTGGTGGACTCGGGCGC
GAAGAATATGGAGATCGCAATCGTGAGGTTCCAGAAGCCCATCGAGATAA
TGACAGAGGACAAGATGCAGGCAGTAGCGGCGGAGCTAGACGCGGAGGCG
GAAGAGGCTAAGGAATCCTCGCCTGGGGAAGTGCAGATGACCTAAATAAT
GACAGAGGACAAGATGCAGGCAGTAGCGGCGGAGCTAGACGCGGAGGCGG
AAGAGGCTAAGGAATCCTCGCCTGGGGAAGTGCAGATGACCTAA
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