mRNA_H-elongata_contig66283.14228.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig66283.14228.1 vs. uniprot
Match: A0A6H5KZ46_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ46_9PHAE) HSP 1 Score: 717 bits (1851), Expect = 4.480e-253 Identity = 376/566 (66.43%), Postives = 436/566 (77.03%), Query Frame = 3
Query: 90 VKHYAPSAAAQETAKASEILFTIFRSVLAEFGIKLSDVAGGTTDAGSDVKAMCINFLLAVYNIYWDWCDCHLADKAAENAFGTSADPQKSKNRGTRQVIQLVIKAAAKVNQSTIFKQKFDETHMEMLNETFKITKHAPQRWLSLVRVMERITRLWHILRKVYANDGEEFPLDKDNNKDDILQLYSLLQPLSAITRDGQYGAVPMSAEMHMAFVVLKKEVLDPEQPLRVFDIPATPGXXXXXXXXXXXXXXXXKPPLPHAVVQPDDLRPTTVKTRGELSKGLVQRLYSRLWDKQTADPSPFRDAAVLLTPSYKDSEFHRALCLTAADGEYLAPSKAGLAPTLDEEVESKLDGCWADIKTKASEAARKEHSRSG*TGKDDQPPLKRPRALSITTTTPRFPSLGRSRVRSDNGD-GEGLDSEEKVLVQHVTGELERYQALYVTPEKLDTRDVLPWWRQTGRKTFPYLSPVAQQVFGNQARASQVERDFSGCGILLAPNRSRIDTYWVEMVMFLYANFKHIPALKDTPMIAAKDIRACLPARFTGGDADLAAAEAAFDIIHNTN-SDMGL 1781
VKHYAPSAA Q + KAS +LFT+FRS+LAEFGIKLSD+AGGTTD+GSD+KAMC NFLLA +N+YWDWC CHLAD+AAE AFGTSADPQKSKN+ RQV+ L+IKAAAKVNQS IFKQKFDE MEML ET KI++HAPQRWLSLVRV+ERI RLWH+LRK L+SLLQPL+ ITRDGQYGAVPM+AEMHMAF LKKE+LDP++PL+VFDIPATP K LPH +V+P LRP KTR L+K LV++LY R+WD+ +ADPSPFR+A+VLLTPSYKD+ F +A LTAAD ++L KA LAPT+D EV+ KL+ CWADIK +ASEAARK+HS T + QPPLKR + T PRF SL R+RVR D D GEG DSE+KVL+Q V+ ELER+QALY+T E+LDTR+VLPWWR TGRK FP L+PVAQQV GNQA A+QVERDFS C LL NRSRIDTYWVEMVMFL+ N+K IPA KD PMIAAKDIR CLP RF GGDADLAAAEA FD+I NTN SD+G+
Sbjct: 82 VKHYAPSAAVQASEKASGVLFTVFRSLLAEFGIKLSDLAGGTTDSGSDIKAMCTNFLLAQHNVYWDWCVCHLADRAAEAAFGTSADPQKSKNKDARQVVSLIIKAAAKVNQSPIFKQKFDEAQMEMLGETLKISRHAPQRWLSLVRVIERIIRLWHVLRK----------------------LFSLLQPLAVITRDGQYGAVPMTAEMHMAFAELKKELLDPDEPLKVFDIPATP--VSPEAEQADEEVPKKKKSLPHKMVEPAALRPVATKTRELLTKTLVEKLYRRVWDQDSADPSPFRNASVLLTPSYKDTNFLQAHALTAADSQHLDQRKAHLAPTIDTEVDQKLNDCWADIKARASEAARKKHSARA-TAEGGQPPLKR-LSTPATKARPRFASLARNRVRGDTEDVGEG-DSEDKVLMQQVSQELERFQALYMTAEELDTREVLPWWRNTGRKMFPCLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRFNGGDADLAAAEATFDVIENTNNSDIGV 620
BLAST of mRNA_H-elongata_contig66283.14228.1 vs. uniprot
Match: A0A6H5L1G0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1G0_9PHAE) HSP 1 Score: 629 bits (1621), Expect = 6.520e-216 Identity = 343/595 (57.65%), Postives = 405/595 (68.07%), Query Frame = 3
Query: 6 CKKSG*KYLDVHEFKVDSNFILRHALLAVKHYAPSAAAQETAKASEILFTIFRSVLAEFGIKLSDVAGGTTDAGSDVKAMCINFLLAVYNIYWDWCDCHLADKAAENAFGTSADPQKSKNRGTRQVIQLVIKAAAKVNQSTIFKQKFDETHMEMLNETFKITKHAPQRWLSLVRVMERITRLWHILRKVYANDGEEFPLDKDNNKDDILQLYSLLQPLSAITRDGQYGAVPMSAEMHMAFVVLKKEVLDPEQPLRVFDIPATPGXXXXXXXXXXXXXXXX--KPPLPHAVVQPDDLRPTTVKTRGELSKGLVQRLYSRLWDKQTADPSPFRDAAVLLTPSYKDSEFHRALCLTAADGEYLAPSKAGLAPTLDEEVESKLDGCWADIKTKASEAARKEHSRSG*TGKDDQPPLKRPRALSITTTTPRFPSLGRSRVRSDNGDGEGLDSEEKVLVQHVTGELERYQALYVTPEKLDTRDVLPWWRQTGRKTFPYLSPVAQQVFGNQARASQVERDFSGCGILLAPNRSRIDTYWVEMVMFLYANFKHIPALKDTPMIAAKDIRACLPARFTGGDADLAAAEAAFDIIHNTNS-DMGL 1781
CK +G KY+DVH V+SN L+H LLAVKHYAPSAA Q T KASEILF +F SVL EFG+K+SD+AGGTTD+GSDVKAMC+NFLLA + WDWC CHLAD+AAE AFGTSADPQK KN+ R V+QLVIKAAAKVNQS IFKQKFDE ++M E KI KHAPQRWLSLVRVMERI RLWH+LRKVYANDG EFPLDK +NKD+ILQLYSLL+PL+AITRDGQYGAVPMSAEMHMAF LK+E LDP PL+VFDIP TP K PLPH V+P LRP KTR L K LV++LY+RLWD+++ADPSPFR+A+VLLTPSYKDS+F LTA D ++L +A LAPTLD++V+SKLD WADI+ +AS+AARKEHS++ TG+D QPPLKR + S PRF SL R R R ++ DG DSE VL+Q ++ E+ERY +LY+T E++ +R+ W HIP KD PMIAA+DI CLP RF GGDADL AAEAAFD+I NT + D+GL
Sbjct: 249 CKITGLKYIDVHVCYVNSNLELQHELLAVKHYAPSAAVQATGKASEILFNVFNSVLREFGVKISDLAGGTTDSGSDVKAMCVNFLLAQHKGSWDWCVCHLADRAAEQAFGTSADPQKPKNKDARGVVQLVIKAAAKVNQSPIFKQKFDEAQLQMTGEVLKIRKHAPQRWLSLVRVMERIIRLWHVLRKVYANDGVEFPLDKGDNKDNILQLYSLLRPLAAITRDGQYGAVPMSAEMHMAFAELKQEGLDPTGPLKVFDIPPTPDSPAALQSDEELPVTVNTGKKPLPHKTVEPAALRPVATKTRELLGKALVEKLYARLWDEESADPSPFRNASVLLTPSYKDSKFLDGHALTAGDAQHLGEGRAHLAPTLDDDVQSKLDASWADIRKRASDAARKEHSKAA-TGQDGQPPLKRFCSPS-GAPKPRFASLARHRARHESADGSDGDSEINVLMQQMSQEIERYHSLYITAEEV----------------------------------------------------ARLSRTW------------HIPGFKDIPMIAARDIHTCLPPRFNGGDADLTAAEAAFDVIKNTETGDVGL 777
BLAST of mRNA_H-elongata_contig66283.14228.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE) HSP 1 Score: 511 bits (1315), Expect = 7.630e-169 Identity = 278/594 (46.80%), Postives = 362/594 (60.94%), Query Frame = 3
Query: 3 TCKKSG*KYLDVHEFKVDSNFILRHALLAVKHYAPSAAAQETAKASEILFTIFRSVLAEFGIKLSDVAGGTTDAGSDVKAMCINFLLAVYNIYWDWCDCHLADKAAENAFGTSADPQKSKNRGTRQVIQLVIKAAAKVNQSTIFKQKFDETHMEMLNETFKITKHAPQRWLSLVRVMERITRLWHILRKVYANDGEEFPLDKDNNKDDILQLYSLLQPLSAITRDGQYGAVPMSAEMHMAFVVLKKEVLDPEQPLRVFDIPATPGXXXXXXXXXXXXXXXXKPPLPHAVVQPDDLRPTTVKTRGELSKGLVQRLYSRLWDKQTADPSPFRDAAVLLTPSYKDSEFHRALCLTAADGEYLAPSKAGLAPTLDEEVESKLDGCWADIKTKASEAARKEHSRSG*TGKDDQPPLKRPRALSITTTT-----PRFPSLGRSR---VRSDNGDGEGLDSEEKVLVQHVTGELERYQALYVTPEKLDTRDVLPWWRQTGRKTFPYLSPVAQQVFGNQARASQVERDFSGCGILLAPNRSRIDTYWVEMVMFLYANFKHIPALKDTPMIAAKDIRACLPARFTGGDADLAAAEAAFDIIHN 1760
T K SG K+L +H F VD+NF L+ ALL++K YAP + +AS++LF I +SVL EFG+K S +A GTTD+GSDVKA+ N L +Y + W WC CHL KAAE A+G DP KSKN R +++ V+K +N+S FK KF++ ++ML E FK+ KHAPQRWLSL R +ER RLWH+LRK+Y+++G FPL++ + KD ILQLYSLLQPLS+ITRDGQYG PM A++ M F +L +VLDP + L+VF +P K PLP +V P+ L KTR E+ + LV R Y R+WD+ T DP F AA LLTP + + A+ L A D EYL + APT+DEEV +KLD W +IK +A EA +KE + + +G KR R F + GRS S GD + Q V E+ RY+ +++T L +VL +W TGR +FP L VAQQ FG+Q A+ VERDFSGCG+ L PNRSR++ YWVEMVMFL ANFK IP + P I +KDIR CLPA+F G D DL +AE A D + N
Sbjct: 265 TDKGSGRKFLGLHVFYVDANFELKDALLSIKRYAPDQGSLGDQRASDVLFQIMKSVLEEFGLKPSHLASGTTDSGSDVKAVSTNCLWPMYAVLWCWCFCHLMVKAAEQAYGIHLDPAKSKNPQARDILKKVVKVVENLNKSPNFKAKFEDLQVDMLGEIFKMVKHAPQRWLSLTRTVERTIRLWHVLRKLYSDEGRNFPLEEGDTKDAILQLYSLLQPLSSITRDGQYGDAPMMADIFMKFGMLNTDVLDPSKDLKVFQVPPI-------GEDGLPDRGQQKKPLPFKMVPPEQLHAAVEKTRVEMRRALVSRFYGRVWDENTLDPPFFCHAACLLTPPFSEGLHVAAMKLAAGDDEYLPSTSTATAPTMDEEVTAKLDETWKEIKERAVEAVKKEQAAAS-SGPGAAGVFKRARTAGXXXRRRPVDGDEFAAFGRSVGGVEESKQGDA---------VEQEVANEIMRYKGVFMTSNDLHPTEVLSYWATTGRHSFPALKHVAQQTFGSQPSAAPVERDFSGCGLFLVPNRSRVEEYWVEMVMFLNANFKFIPKYDNIPSIDSKDIRKCLPAKFKGTDEDLLSAEMALDPLRN 841
BLAST of mRNA_H-elongata_contig66283.14228.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE) HSP 1 Score: 464 bits (1195), Expect = 5.520e-154 Identity = 254/578 (43.94%), Postives = 350/578 (60.55%), Query Frame = 3
Query: 9 KKSG*KYLDVHEFKVDSNFILRHALLAVKHYAPSAAAQETAKASEILFTIFRSVLAEFGIKLSDVAGGTTDAGSDVKAMCINFLLAVYNIYWDWCDCHLADKAAENAFGTSADPQKSKNRGTRQVIQLVIKAAAKVNQSTIFKQKFDETHMEMLNETFKITKHAPQRWLSLVRVMERITRLWHILRKVYANDGEEFPLDKDNNKDDILQLYSLLQPLSAITRDGQYGAVPMSAEMHMAFVVLKKEVLDPEQPLRVFDIPATPGXXXXXXXXXXXXXXXXKPPLPHAVVQPDDLRPTTVKTRGELSKGLVQRLYSRLWDKQTADPSPFRDAAVLLTPSYKDSEFHRALCLTAADGEYLAPSKAGLAPTLDEEVESKLDGCWADIKTKASEAARKEHSR-SG*TGKDDQPPLKRPRALSITTTTPR-----FPSLGRSRVRSDNGDGEGLDSEEKVLVQHVTGELERYQALYVTPEKLDTRDVLPWWRQTGRKTFPYLSPVAQQVFGNQARASQVERDFSGCGILLAPNRSRIDTYWVEMVMFLYANFKHIPALKDTPMIAAKDIRACLPARFTGGDADL 1724
K SG K+L VH F V +NF L+ LL++K Y PS A AKA+E+L I ++L EFG + SD+A GTTD+GSDVK++ +N L Y + W+WC CHL KAAE+AFGT DPQKSKN +++ +I +++S KF++ +++L E KI APQRWL+LVR MER+ RLWH+LRK+Y++ G+ F L++ +NKD I QLYSLLQ LS++TRDGQYG +PM A++++ F +LK VL+ L+VFDIP K PL H +V D+L P K R +L + LV R Y +WD DPS F DAA LLTP + + + A+ LTA + + LA +APT DE+V KL+G WA+IK +A A + E +R +G G P KR R + + F G + V DG +D E + V+GE+ RY+ +++ P L DVL +W + G++ FP L VAQQ FG+QA A+Q+ERDFS CG+ NRSR + YW+EMVM L N++ IP KD P I +KDIR CLPA+++ G L
Sbjct: 23 KPSGRKFLGVHVFYVTANFELKQTLLSIKRYRPSQDALGEAKAAEVLLEILEAILHEFGRRPSDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCYCHLMIKAAEDAFGTHPDPQKSKNPEAHNMLKNLIGIVGTLHKSLNLTAKFEDLQVDLLGEVLKIPNQAPQRWLTLVRTMERVIRLWHVLRKLYSDAGKNFILEEGDNKDCIPQLYSLLQSLSSVTRDGQYGGLPMLADIYIKFGMLKMGVLNSSADLKVFDIPPL-------GEDGLPDRKEQKKPLRHKMVAHDELHPVAQKARDKLCRALVSRFYGHVWDDSCLDPSMFCDAACLLTPPFSEGNYLSAMKLTAEEDDNLAAVSTVVAPTSDEDVREKLEGIWAEIKKRAVTAVKTEQNRVAGEGGGQGSDPFKRARTSGAVPSRRKNYEDDFSMFGCNEVAPSQSDGGDVDFVE----EEVSGEIIRYKGVFMKPIDLPPSDVLAYWNKVGKQMFPSLKYVAQQTFGSQASAAQIERDFSHCGLFSTGNRSRAEEYWLEMVMVLKGNYELIPDYKDIPSIDSKDIRKCLPAKYSVGGLQL 589
BLAST of mRNA_H-elongata_contig66283.14228.1 vs. uniprot
Match: A0A6H5JYQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYQ2_9PHAE) HSP 1 Score: 389 bits (999), Expect = 2.030e-126 Identity = 190/245 (77.55%), Postives = 213/245 (86.94%), Query Frame = 3
Query: 3 TCKKSG*KYLDVHEFKVDSNFILRHALLAVKHYAPSAAAQETAKASEILFTIFRSVLAEFGIKLSDVAGGTTDAGSDVKAMCINFLLAVYNIYWDWCDCHLADKAAENAFGTSADPQKSKNRGTRQVIQLVIKAAAKVNQSTIFKQKFDETHMEMLNETFKITKHAPQRWLSLVRVMERITRLWHILRKVYANDGEEFPLDKDNNKDDILQLYSLLQPLSAITRDGQYGAVPMSAEMHMAFVVLK 737
TCK SG KYL VH F VDSNF LRHAL++VKHYAPS Q T KASEILFTIFR+ LAE+GIKLSD+AGGTTD+GSDVKAMC+N LL ++ I+WDWCDCHLADK+AEN FGTSADPQ+SKN+ R VI+LVIK AAK+NQSTI KQKF++ +EML+E KITKHAPQRWLSLV VMERI RLWH+LRKVYANDGEEFPLDK NN+DDILQLYSLLQPLSAITRDGQYG PM+AEMH+AF LK
Sbjct: 229 TCKVSGRKYLGVHVFYVDSNFSLRHALISVKHYAPSTEIQGTEKASEILFTIFRATLAEYGIKLSDLAGGTTDSGSDVKAMCVNILLGLHKIWWDWCDCHLADKSAENTFGTSADPQQSKNKIARDVIKLVIKTAAKINQSTIVKQKFEKVTLEMLDEILKITKHAPQRWLSLVLVMERIIRLWHVLRKVYANDGEEFPLDKGNNRDDILQLYSLLQPLSAITRDGQYGNAPMTAEMHLAFAQLK 473
BLAST of mRNA_H-elongata_contig66283.14228.1 vs. uniprot
Match: A0A6H5K8W6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8W6_9PHAE) HSP 1 Score: 388 bits (997), Expect = 1.240e-125 Identity = 242/563 (42.98%), Postives = 305/563 (54.17%), Query Frame = 3
Query: 81 LLAVKHYAPSAAAQETAKASEILFTIFRSVLAEFGIKLSDVAGGTTDAGSDVKAMCINFLLAVYNIYWDWCDCHLADKAAENAFGTSADPQKSKNRGTRQVIQLVIKAAAKVNQSTIFKQKFDETHMEMLNETFKITKHAPQRWLSLVRVMERITRLWHILRKVYANDGEEFPLDKDNNKDDILQLYSLLQPLSAITRDGQYGAVPMSAEMHMAFVVLKKEVLDPEQPLRVFDIPATPGXXXXXXXXXXXXXXXXKPPLPHAVVQPDDLRPTTVKTRGELSKGLVQRLYSRLWDKQTADPSPFRDAAVLLTPSYKDSEFHRALCLTAADGEYLAPSKAGLAPTLDEEVESKLDGCWADIKTKASEAARKEHSRSG*TGKD---DQPPLKRPRALSITTTTPRFPSLGRSRVRSDNGDGEGLDSEEKVLVQHVTGELERYQALYVTPEKLDTRDVLPWWRQTGRKTFPYLSPVAQQVFGNQARASQVERDFSGCGILLAPNRSRIDTYWVEMVMFLYANFKHIPALKDTPMIAAKDIRACLPARFTGGDADLAAAEAAFDIIHN 1760
L K Y+P A AKASE+L IF+S+L EFG+ S +A GTTD+GSDVKA+ IN L + + W+WC CHL KAAE F TS D KSKN R +++ VIK +N+S+ KF++ +++L E FK+ KHAPQRWL L R +ERI RLWH PLS+ITRD QYG PM+AE+ M F LK VLD +PLRVFDIPA K LP +V D L PTT R EL + L+ RLY R+W++Q+ +PS F DAA LLTP + + A+ LTA D YL S +APT D EV +KLD W +I+ +A E+ + E R+G G D P KR S GRS R+ E DS V+ +A +T +VL +W +TG+ FP L VAQQ FGNQA A+ VERDFSGCG+ + PNRSR+D YWVEMVMFL ANF + + P I KDIR CLPA+F G D D AE A + N
Sbjct: 2 LFKSKRYSPDQGALGQAKASEVLLVIFKSILHEFGLNPSYLASGTTDSGSDVKAVSINGLWKHFGVLWNWCFCHLM-KAAEQPFCTSLDTVKSKNPAARDLLKTVIKVVETLNKSSNLGAKFEDLQVDLLGEVFKVVKHAPQRWLGLTRTLERIIRLWH--------------------------------PLSSITRDVQYGGAPMTAEIFMKFATLKTNVLDMSEPLRVFDIPAL-------GEDGLPNRGEQKKALPSKMVSADQLHPTTTLAREELCRALMSRLYERVWNEQSPNPSFFCDAACLLTPPFSEGRHVSAMRLTAEDAMYLPNSSNIIAPTADFEVTAKLDWAWTEIRKRAVESVKTEQDRAG--GSDAGGGGGPFKRAHT-----------SGGRS-ARNPTDPDEFTDSGRTAAVE---------EARRMT--SCSRSEVLSYWGRTGKHAFPSLKHVAQQTFGNQASAAPVERDFSGCGLFMVPNRSRVDEYWVEMVMFLKANFNSSRRI-NIPQIDPKDIRKCLPAKFEGTDEDHLNAEMALYPLSN 498
BLAST of mRNA_H-elongata_contig66283.14228.1 vs. uniprot
Match: A0A6H5KFQ8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ8_9PHAE) HSP 1 Score: 360 bits (924), Expect = 1.130e-114 Identity = 208/485 (42.89%), Postives = 284/485 (58.56%), Query Frame = 3
Query: 327 AFGTSADPQKSKNRGTRQVIQLVIKAAAKVNQSTIFKQKFDETHMEMLNETFKITKHAPQRWLSLVRVMERITRLWHILRKVYANDGEEFPLDKDNNKDDILQLYSLLQPLSAITRDGQYGAVPMSAEMHMAFVVLKKEVLDPEQPLRVFDIPATPGXXXXXXXXXXXXXXXXKPPLPHAVVQPDDLRPTTVKTRGELSKGLVQRLYSRLWDKQTADPSPFRDAAVLLTPSYKDSEFHRALCLTAADGEYLAPSKAGLAPTLDEEVESKLDGCWADIKTKASEAARKEHSRSG*TGKD--DQPPLKRPRALSITTTT-----PRFPSLGRSRVRSDNGDGEGLDSEEKVLVQHVTGELERYQALYVTPEKLDTRDVLPWWRQTGRKTFPYLSPVAQQVFGNQARASQVERDFSGCGILLAPNRSRIDTYWVEMVMFLYANFKHIPALKDTPMIAAKDIRACLPARFTGGDADLAAAEAAFDIIHN 1760
AFG DP KSKN G R VI++VIK +N+S+ + KF++ E+L E K+ KHAPQRWLS+VR MERI RLWH LRK+Y+++G+ FPL++ +NK+ +LQLYSLL+PL ITRDGQYG PM A+++M +LK +L+ E+ L+V++ P PLPH +V +L P K R EL + LV RL+ R W DPS F D++ LLTP Y A+ LT +G+YL L PT DE+VE K W IK +A +A +++ +++ +G D P KR R + F L + +G G+ D V GE++R +AL + L RDVL +W+Q+GR FP L+ VAQQ FG+QA A+Q+ERDFS G+L A NR+R+D YWVEMV+FL ANF+ IP D P + +K IR CLPA+F G + L AE A D + N
Sbjct: 28 AFGVHPDPTKSKNPGARDVIKVVIKVVENLNKSSNLRAKFEDLETELLGEVLKVVKHAPQRWLSMVRTMERIIRLWHALRKLYSDEGKVFPLEEGDNKNGVLQLYSLLEPLCMITRDGQYGGAPMMADIYMKMGILKMGMLNLEKELKVYETPRV-------GENGLPDREEQNKPLPHKMVAHGNLHPAAKKAREELCRALVARLFGRYW-AGCVDPS-FVDSSCLLTPPYSSGIHISAMKLTEEEGDYLPTGLTVLTPTTDEDVEDKKAEAWGMIKKRAIQAVKEDQAQANGSGDGGGDAGPFKRARTSGNGSARNDAGEDHFAVLCTAGAVEQSGSGDDGDLS-------VAGEIQRSRALQMNSSDLQPRDVLNYWKQSGRHAFPALNYVAQQRFGSQAYAAQIERDFSTGGLLGASNRNRLDEYWVEMVLFLKANFQCIPGYDDIPNMDSKSIRECLPAKFKGTNEYLLDAEMALDPLEN 496
BLAST of mRNA_H-elongata_contig66283.14228.1 vs. uniprot
Match: A0A6H5JZQ5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ5_9PHAE) HSP 1 Score: 351 bits (900), Expect = 7.070e-114 Identity = 182/297 (61.28%), Postives = 219/297 (73.74%), Query Frame = 3
Query: 882 DLRPTTVKTRGELSKGLVQRLYSRLWDKQTADPSPFRDAAVLLTPSYKDSEFHRALCLTAADGEYLAPSKAGLAPTLDEEVESKLDGCWADIKTKASEAARKEHSRSG*TGKDDQPPLKRPRALSIT---TTTPRFPSLGRSRVRSDNGDGEGLDSEEKVLVQHVTGELERYQALYVTPEKLDTRDVLPWWRQTGRKTFPYLSPVAQQVFGNQARASQVERDFSGCGILLAPNRSRIDTYWVEMVMFLYANFKHIPALKDTPMIAAKDIRACLPARFTGGDADLAAAEAAFDIIHNT 1763
+LRP TVKTR ELSK LV+RL+ R+WD +ADPSPFRDAAVLLTP + ++ AL L+AAD EYL+ K GLAPT+D EV +KLDGCWADIK +A EAAR+ + RS QP KR R S T T RF GR RS D DSE++ L + V GELE Y++L++ ++LD R+VLPWW++TG+ FP+L+PVAQQVFGNQA SQVERDFSG GILLAPNRSR+DTYWVE+VMFL ANF HIP LK PM+AAK+IR+CLPARF G DADL AAEA FD++ NT
Sbjct: 6 ELRPVTVKTRKELSKALVERLFGRVWDDDSADPSPFRDAAVLLTPPFNTGKYLEALRLSAADAEYLSIGKKGLAPTMDSEVTAKLDGCWADIKRRAWEAARERNRRSESLDDGVQPLHKRFRGESSTSSATRKSRFSLFGRGDARSSTDDMADEDSEDRKLGEVVAGELEHYKSLFIKADELDCREVLPWWKRTGKNIFPHLAPVAQQVFGNQAAVSQVERDFSGVGILLAPNRSRMDTYWVEIVMFLNANFAHIPPLKQIPMVAAKNIRSCLPARFHGRDADLMAAEAIFDVLMNT 302
BLAST of mRNA_H-elongata_contig66283.14228.1 vs. uniprot
Match: A0A6H5KEE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE6_9PHAE) HSP 1 Score: 355 bits (911), Expect = 4.060e-113 Identity = 195/445 (43.82%), Postives = 268/445 (60.22%), Query Frame = 3
Query: 90 VKHYAPSAAAQETAKASEILFTIFRSVLAEFGIKLSDVAGGTTDAGSDVKAMCINFLLAVYNIYWDWCDCHLADKAAENAFGTSADPQKSKNRGTRQVIQLVIKAAAKVNQSTIFKQKFDETHMEMLNETFKITKHAPQRWLSLVRVMERITRLWHILRKVYANDGEEFPLDKDNNKDDILQLYSLLQPLSAITRDGQYGAVPMSAEMHMAFVVLKKEVLDPEQPLRVFDIPATPGXXXXXXXXXXXXXXXXKPPLPHAVVQPDDLRPTTVKTRGELSKGLVQRLYSRLWDKQTADPSPFRDAAVLLTPSYKDSEFHRALCLTAADGEYLAPSKAGLAPTLDEEVESKLDGCWADIKTKASEAARKEHSRSG*TGKDDQPPL-KRPRALSITTTTPRFPS------LGRSRVRSDNGDGEGLDSEEKVLVQHVTGELERYQALYV 1403
+K Y+PS A A ASE+L IF+S+L EFG++ SD+A GTTD+GSDVK+ +N L Y + W+WC CHL KAAE+ FGT DPQKSKN R +++ VI +N+S+ FK KF++ +++L + KI APQRWL+ VR +ER+ RLWH+LRK+Y++ G+ FPL++ +NK+ ILQL+SLLQ LS++TRDGQYG PM A++ M F LK EVLDP +PL+VFDIP K LPH +V+PDDL P K R +L + LV RLY R+WD T DPS F DA+ LLTP + + A+ LTA + YL +APT EEV+ KLDG W IK A +A + S + +G D L KR R ++ + P GR+ ++ GE V+ V GE+ RY+ +++
Sbjct: 10 IKRYSPSQDALGEAAASEVLLEIFKSILREFGLRPSDLASGTTDSGSDVKSASVNGLYPQYGVLWNWCFCHLMVKAAEDGFGTHVDPQKSKNPEARDMLKNVISMVGTLNRSSNFKAKFEDLQVDLLGDVLKIPNQAPQRWLTQVRTLERVIRLWHVLRKLYSDAGKNFPLEEGDNKNAILQLFSLLQSLSSVTRDGQYGNAPMQADVFMKFGELKMEVLDPSKPLKVFDIPPL-------GQDGLPDREEQKKALPHKMVEPDDLHPVAKKARSKLGRALVSRLYGRVWDHNTLDPSFFCDASCLLTPPFSEGHHLSAMKLTAEEHAYLPAGSVVVAPTSYEEVKEKLDGVWTKIKQGAVKAVKTAQSEAEGSGGDGSGGLFKRARTRHSGSSRRKNPEEHQFACFGRTETTQEDSQGES-----DVVEDDVGGEIMRYKGVFI 442
BLAST of mRNA_H-elongata_contig66283.14228.1 vs. uniprot
Match: A0A6H5K0P1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0P1_9PHAE) HSP 1 Score: 353 bits (907), Expect = 2.300e-110 Identity = 198/468 (42.31%), Postives = 273/468 (58.33%), Query Frame = 3
Query: 222 AGSDVKAMCINFLLAVYNIYWDWCDCHLADKAAENAFGTSADPQKSKNRGTRQVIQLVIKAAAKVNQSTIFKQKFDETHMEMLNETFKITKHAPQRWLSLVRVMERITRLWHILRKVYANDGEEFPLDKDNNKDDILQLYSLLQPLSAITRDGQYGAVPMSAEMHMAFVVLKKEVLDPEQPLRVFDIPATPGXXXXXXXXXXXXXXXXKPPLPHAVVQPDDLRPTTVKTRGELSKGLVQRLYSRLWDKQTADPSPFRDAAVLLTPSYKDSEFHRALCLTAADGEYLAPSKAGLAPTLDEEVESKLDGCWADIKTKASEAARKEHSRS-G*TGKDDQPPLKRPRALSITTTTPR-----FPSLGRSRV---RSDNGDGEGLDSEEKVLVQHVTGELERYQALYVTPEKLDTRDVLPWWRQTGRKTFPYLSPVAQQVFGNQARASQVERDFSGCGILLAPNRSRIDTYWV 1598
+GSDVK++ +N L Y + W+WC CHL KAAE+AFGT DPQ SKN R +++ +I +++S + KF++ +++L E I APQRWL+LVR MER+ RLW ++RK+Y++ G+ FPL++ +NKD I QLYSLLQPLS++TRDGQYG +PM A+++M F +LK VL+ L+VFDIP K PLPH +V D+L P K R EL + LV R Y R+WD DPS F DAA LLTP + + + A+ LTA + EYLA +APT DE+V KL+G WA+IK +A A + +R+ G G P KR R + + F GR+ V +SD GD + ++ E V+GE+ RDVL +W + G + P L VAQQ FG+QA A+Q+ERDFS CG+ NRSR + YW+
Sbjct: 215 SGSDVKSVSVNGLHPKYGVLWNWCYCHLMVKAAEDAFGTRPDPQMSKNPEARNMLKNLIGIIGTLHKSNLT-AKFEDLQVDLLGEVLNIPNQAPQRWLTLVRTMERVIRLWRVMRKLYSDAGKNFPLEEGDNKDCINQLYSLLQPLSSVTRDGQYGGLPMLADIYMKFGMLKMGVLNSSADLKVFDIPPL-------GEDGLPDREEQKKPLPHKMVAHDELHPVAQKARNELCRALVSRFYGRVWDDSCLDPSMFCDAACLLTPPFSEGNYPSAMKLTAEEDEYLAAGSTVVAPTSDEDVREKLEGIWAEIKKRAITAVKTAQNRAAGEGGGQGSDPFKRARTSGAAPSRRKNYENDFSMFGRNEVAPSQSDEGDVDFVEEE-------VSGEI--------------MRDVLTYWNKVGEQMLPSLKYVAQQTFGSQASAAQIERDFSHCGLFSTGNRSRAEEYWL 653 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig66283.14228.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig66283.14228.1 >prot_H-elongata_contig66283.14228.1 ID=prot_H-elongata_contig66283.14228.1|Name=mRNA_H-elongata_contig66283.14228.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=322bp MCINFLLAVYNIYWDWCDCHLADKAAENAFGTSADPQKSKNRGTRQVIQLback to top mRNA from alignment at H-elongata_contig66283:607..3155+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig66283.14228.1 ID=mRNA_H-elongata_contig66283.14228.1|Name=mRNA_H-elongata_contig66283.14228.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2549bp|location=Sequence derived from alignment at H-elongata_contig66283:607..3155+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig66283:607..3155+ >mRNA_H-elongata_contig66283.14228.1 ID=mRNA_H-elongata_contig66283.14228.1|Name=mRNA_H-elongata_contig66283.14228.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1932bp|location=Sequence derived from alignment at H-elongata_contig66283:607..3155+ (Himanthalia elongata Himel1 dioecious)back to top |