prot_H-elongata_contig66266.14225.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig66266.14225.1
Unique Nameprot_H-elongata_contig66266.14225.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length156
Homology
BLAST of mRNA_H-elongata_contig66266.14225.1 vs. uniprot
Match: A0A6H5KT00_9PHAE (ABC protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT00_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 2.300e-49
Identity = 104/172 (60.47%), Postives = 120/172 (69.77%), Query Frame = 0
Query:    1 MGPSGAGKTSLLNVLAGRHREMSGVSGGLSGCGRGGRVAGAVRVSGVEVGPAKVRGLSAYVAQEDVLPETMTCFEHLMFHAELRVKWGRCFNRA-----------------DRKRRVM---RELHIENIRDSRIGGELARGISGGERRRLSISTELLTRPGLLFLDEPTTGL 152
            MGPSGAGKT+LLNVLAGR R +   +        GGRV GAVR++G  V  A+VRG+S YV QEDVLPET+TCFEHLMFHAELR+       R                  DRK RV+   REL +E++RDSRIGG L+RGISGGE+RRLSI+TELLT PGLLFLDEPTTGL
Sbjct: 1312 MGPSGAGKTTLLNVLAGRMRRLGNKN-------NGGRVTGAVRINGRAVTAAEVRGVSGYVTQEDVLPETLTCFEHLMFHAELRMSTPEAVTRGCGXXXXXXRRXXRASREDRKHRVLQVLRELRLEDVRDSRIGGGLSRGISGGEKRRLSIATELLTCPGLLFLDEPTTGL 1476          
BLAST of mRNA_H-elongata_contig66266.14225.1 vs. uniprot
Match: D8LNV5_ECTSI (ATP-binding cassette superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNV5_ECTSI)

HSP 1 Score: 177 bits (448), Expect = 2.040e-48
Identity = 104/172 (60.47%), Postives = 122/172 (70.93%), Query Frame = 0
Query:    1 MGPSGAGKTSLLNVLAGRHREMSGVSGGLSGCGRGGRVAGAVRVSGVEVGPAKVRGLSAYVAQEDVLPETMTCFEHLMFHAELRVKW-----GRC------------FNRADRKRRVM---RELHIENIRDSRIGGELARGISGGERRRLSISTELLTRPGLLFLDEPTTGL 152
            MGPSGAGKT+LLNVLAGR   +   +        GGRV GAVR++G  V  A+VRG+S YV QEDVLPET+TCFEHLMFHAELR+       G C             ++ DRK RV+   REL +E++RDSRIGG L+RGISGGE+RRLSI+TELLT PGLLFLDEPTTGL
Sbjct: 1405 MGPSGAGKTTLLNVLAGRMHRLGKKN-------NGGRVTGAVRINGRAVTAAEVRGVSGYVTQEDVLPETLTCFEHLMFHAELRMSTPEGVTGACGCGXXXXXXXHRASQEDRKHRVLQVLRELRLEDVRDSRIGGGLSRGISGGEKRRLSIATELLTCPGLLFLDEPTTGL 1569          
BLAST of mRNA_H-elongata_contig66266.14225.1 vs. uniprot
Match: A0A6H5KKD9_9PHAE (ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKD9_9PHAE)

HSP 1 Score: 174 bits (442), Expect = 1.310e-47
Identity = 100/159 (62.89%), Postives = 120/159 (75.47%), Query Frame = 0
Query:    1 MGPSGAGKTSLLNVLAGRHREMSGVSGGLSGCGRGGR--VAGAVRVSGVEVGPAKVRGLSAYVAQEDVLPETMTCFEHLMFHAELRVKWGRCF-NRADRKRRVMRELHIENIRDSRIGGELARGISGGERRRLSISTELLTRPGLLFLDEPTTGLGKTS 156
            MGPSGAGKTSLLN LAGR +++   +   SG GR  R  + GAVR++G+  GPA+VR LSAYV QEDVLPET+TC+EHLMFHA+LR+        R DR   V+ +L +  IRDSRIGG L+RGISGGE+RRLSI TELLTRP LLFLDEPTTGL  ++
Sbjct: 1468 MGPSGAGKTSLLNALAGRLQDVQREA---SGGGRRRRPGLTGAVRLNGLAAGPAEVRALSAYVTQEDVLPETLTCYEHLMFHAQLRLPGHTTLARRHDRVAEVLEQLGLAGIRDSRIGGGLSRGISGGEKRRLSIGTELLTRPALLFLDEPTTGLDSST 1623          
BLAST of mRNA_H-elongata_contig66266.14225.1 vs. uniprot
Match: A0A835Z9G6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9G6_9STRA)

HSP 1 Score: 137 bits (345), Expect = 3.710e-35
Identity = 82/153 (53.59%), Postives = 100/153 (65.36%), Query Frame = 0
Query:    1 MGPSGAGKTSLLNVLAGRHREMSGVSGGLSGCGRGGRVAGAVRVSGVEVGPAKVRGLSAYVAQEDVLPETMTCFEHLMFHAELRVKWG-RCFNRADRKRRVMRELHIENIRDSRIGGELARGISGGERRRLSISTELLTRPGLLFLDEPTTGL 152
            MG SGAGKT+LL +LAGR     G +        GGR +GA+ ++G    PA VR ++ YVAQ+DVLP  +T  EHL FHA LR+        RA+R   V+ EL +  + DSRIG    RGISGGERRRLSI+ ELL+RP LLFLDEPTTGL
Sbjct:  308 MGASGAGKTTLLELLAGRKHGCGGAA-----AAEGGRASGAIALNGAAAAPAHVRAIAGYVAQDDVLPAALTVCEHLAFHAALRLPPELAAAARAERVLEVVGELGLGLVADSRIGDSDRRGISGGERRRLSIAAELLSRPPLLFLDEPTTGL 455          
BLAST of mRNA_H-elongata_contig66266.14225.1 vs. uniprot
Match: C1E9X4_MICCC (ATP-binding cassette superfamily (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E9X4_MICCC)

HSP 1 Score: 127 bits (318), Expect = 1.060e-33
Identity = 77/159 (48.43%), Postives = 101/159 (63.52%), Query Frame = 0
Query:    1 MGPSGAGKTSLLNVLAGRHREMSGVSGGLSGCGRGGRVAGAVRVSGVEVGPAKVRGLSAYVAQEDVLPETMTCFEHLMFHAELRVKWGRCFNRADRKR---RVMRELHIENIRDSRIGGELARGISGGERRRLSISTELLTRPGLLFLDEPTTGLGKTS 156
            +GPSGAGKT+L+++LAGR                G  VAG +RV+G  +  A++R +S YV Q+DVLP T T +EHL FH  LR+       RA  K    + M++L I  I  S IG E  RG+SGGE+RR+SI+TELLT PG++FLDEPTTGL  T+
Sbjct:   20 LGPSGAGKTTLIDILAGRPSV-------------GHEVAGELRVNGRAMTSAEMRAVSGYVTQDDVLPGTSTVWEHLTFHGALRLPGN--VERARLKAVIWQTMQDLGISKIAHSFIGDEFTRGLSGGEKRRVSIATELLTSPGIMFLDEPTTGLDSTN 163          
BLAST of mRNA_H-elongata_contig66266.14225.1 vs. uniprot
Match: A0A7S0KCW1_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0KCW1_9CHLO)

HSP 1 Score: 132 bits (331), Expect = 8.870e-33
Identity = 77/158 (48.73%), Postives = 103/158 (65.19%), Query Frame = 0
Query:    1 MGPSGAGKTSLLNVLAGRHREMSGVSGGLSGCGRGGRVAGAVRVSGVEVGPAKVRGLSAYVAQEDVLPETMTCFEHLMFHAELRVKWGRCFNRADRKR--RVMRELHIENIRDSRIGGELARGISGGERRRLSISTELLTRPGLLFLDEPTTGLGKTS 156
            +GPSGAGKT+LL++LAGR      + G              +RV+G  +  +++R LS YV Q+DVLP T T  EHL+FHA+LR+  G   + A RKR    M+ L IE + DS IG +  RG+SGGE+RR+SI+TELL  PG++FLDEPTTGL  T+
Sbjct:  471 LGPSGAGKTTLLDILAGRATRTHSIRGD-------------IRVNGQPIVSSQIRRLSGYVTQDDVLPGTATVHEHLLFHAKLRLPSGTS-SEAIRKRVCATMQILGIEKLADSFIGDQFQRGLSGGEKRRVSIATELLMSPGIMFLDEPTTGLDSTN 614          
BLAST of mRNA_H-elongata_contig66266.14225.1 vs. uniprot
Match: A0A090M588_OSTTA (ABC transporter, conserved site n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090M588_OSTTA)

HSP 1 Score: 130 bits (326), Expect = 5.290e-32
Identity = 76/158 (48.10%), Postives = 103/158 (65.19%), Query Frame = 0
Query:    1 MGPSGAGKTSLLNVLAGRHREMSGVSGGLSGCGRGGRVAGAVRVSGVEVGPAKVRGLSAYVAQEDVLPETMTCFEHLMFHAELRVKWGRCFNRADRKR--RVMRELHIENIRDSRIGGELARGISGGERRRLSISTELLTRPGLLFLDEPTTGLGKTS 156
            +GPSGAGKT+LL++LAGR                   + G +R++G  +  +++R LS YV Q+DVLP + T +EHLMFHA+LR+  G   +   RKR    M+ L IE + DS IG +  RGISGGE+RR+SI+TELL  PG++FLDEPTTGL  T+
Sbjct: 1162 LGPSGAGKTTLLDILAGRAPRTH-------------IIRGDIRINGQPIVSSQIRRLSGYVTQDDVLPGSATVYEHLMFHAKLRLP-GNTADTDVRKRVESTMQILGIEKLADSFIGDQFQRGISGGEKRRVSIATELLMSPGIMFLDEPTTGLDSTN 1305          
BLAST of mRNA_H-elongata_contig66266.14225.1 vs. uniprot
Match: T0QYN7_SAPDV (ABC transporter domain-containing protein (Fragment) n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QYN7_SAPDV)

HSP 1 Score: 122 bits (305), Expect = 3.220e-31
Identity = 74/155 (47.74%), Postives = 103/155 (66.45%), Query Frame = 0
Query:    1 MGPSGAGKTSLLNVLAGRHREMSGVSGGLSGCGRGGRVAGAVRVSGVEVGPAKVRGLSAYVAQEDVLPETMTCFEHLMFHAELRVKWGRCFNRADRKRRV---MRELHIENIRDSRIGGELARGISGGERRRLSISTELLTRPGLLFLDEPTTGL 152
            MGPSGAGK+SLL+V+AGR  + +G                +V V+G +    +++ LS+YV Q+DV  ET+T  EHL+F AELR+  G+ F+ A R+ RV   + EL ++  R S+IGG   RGISGG+R+RLS +TE+LT P LLF+DEPT+GL
Sbjct:   68 MGPSGAGKSSLLDVIAGRQNDYTG----------------SVLVNG-QKWTKQMKKLSSYVMQDDVFYETLTVKEHLLFQAELRM--GKTFDAAQREARVNYVIEELGLDKCRHSQIGGGRIRGISGGQRKRLSFATEILTNPSLLFVDEPTSGL 203          
BLAST of mRNA_H-elongata_contig66266.14225.1 vs. uniprot
Match: A0A7S2WSI0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSI0_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.580e-30
Identity = 76/161 (47.20%), Postives = 102/161 (63.35%), Query Frame = 0
Query:    1 MGPSGAGKTSLLNVLAGRHREMSGVSGGLSGCGRGGRVAGAVRVSGVEVGPAKVRGLSAYVAQEDVLPETMTCFEHLMFHAELRV---KWGRCFNRADRKR--RVMRELHIENIRDSRIGGELARGISGGERRRLSISTELLTRPGLLFLDEPTTGLGKTS 156
            MGPSGAGKTSLL+VLAGR                 G+V G VRV+G  + P ++R LS YV QED+LP  +T  E L FHA+LR+   K  R  +R + +R   V+  L +   +D+ IGG   RGISGGE+RR+S++ E+L+RP +LFLDE TTGL  ++
Sbjct:  939 MGPSGAGKTSLLDVLAGRKTV--------------GKVTGTVRVNGRAISPMEMRSLSGYVMQEDILPGVLTVRECLQFHAQLRLPPRKTRRSTDRRNTRRIDAVLDALKLTRSQDTIIGGPFRRGISGGEKRRVSVAVEMLSRPAILFLDEATTGLDSST 1085          
BLAST of mRNA_H-elongata_contig66266.14225.1 vs. uniprot
Match: A0A7S0SHN0_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SHN0_9CHLO)

HSP 1 Score: 125 bits (314), Expect = 2.140e-30
Identity = 79/161 (49.07%), Postives = 102/161 (63.35%), Query Frame = 0
Query:    1 MGPSGAGKTSLLNVLAGRHREMSGVSGGLSGCGRGGRVA-GAVRVSGVEVGPAKVRGLSAYVAQEDVLPETMTCFEHLMFHAELRVKWGRCFNRADRKRRV----MRELHIENIRDSRIGGELARGISGGERRRLSISTELLTRPGLLFLDEPTTGLGKTS 156
            +GPSGAGK++LL+ LAGR                 G+VA G VR+ G  VGP +VR +S YV Q+DVLP T T +EHL+F+A LR+  G      D   R     MREL +  +  S IG +  RG+SGGE+RR+SI+TELLT PG++FLDEPTTGL  T+
Sbjct:  281 LGPSGAGKSTLLDFLAGRTPR--------------GQVAHGEVRLDGCLVGPQEVRNVSGYVQQDDVLPGTSTVWEHLLFNAMLRLPDG---TGKDTVYRCVVGWMRELGLTKVAHSFIGDQFTRGLSGGEKRRVSIATELLTSPGIMFLDEPTTGLDSTN 424          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig66266.14225.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KT00_9PHAE2.300e-4960.47ABC protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP... [more]
D8LNV5_ECTSI2.040e-4860.47ATP-binding cassette superfamily n=1 Tax=Ectocarpu... [more]
A0A6H5KKD9_9PHAE1.310e-4762.89ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
A0A835Z9G6_9STRA3.710e-3553.59P-loop containing nucleoside triphosphate hydrolas... [more]
C1E9X4_MICCC1.060e-3348.43ATP-binding cassette superfamily (Fragment) n=1 Ta... [more]
A0A7S0KCW1_9CHLO8.870e-3348.73Hypothetical protein (Fragment) n=1 Tax=Ostreococc... [more]
A0A090M588_OSTTA5.290e-3248.10ABC transporter, conserved site n=2 Tax=Ostreococc... [more]
T0QYN7_SAPDV3.220e-3147.74ABC transporter domain-containing protein (Fragmen... [more]
A0A7S2WSI0_9STRA1.580e-3047.20Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S0SHN0_9CHLO2.140e-3049.07Hypothetical protein (Fragment) n=1 Tax=Mantoniell... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 1..149
e-value: 1.2E-16
score: 61.5
NoneNo IPR availableGENE3D3.40.50.300coord: 1..156
e-value: 3.7E-28
score: 100.7
NoneNo IPR availablePANTHERPTHR19241:SF597coord: 1..154
NoneNo IPR availablePANTHERPTHR19241ATP-BINDING CASSETTE TRANSPORTERcoord: 1..154
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..153

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig66266contigH-elongata_contig66266:1865..2820 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig66266.14225.1mRNA_H-elongata_contig66266.14225.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig66266 1844..2820 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig66266.14225.1 ID=prot_H-elongata_contig66266.14225.1|Name=mRNA_H-elongata_contig66266.14225.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=156bp
MGPSGAGKTSLLNVLAGRHREMSGVSGGLSGCGRGGRVAGAVRVSGVEVG
PAKVRGLSAYVAQEDVLPETMTCFEHLMFHAELRVKWGRCFNRADRKRRV
MRELHIENIRDSRIGGELARGISGGERRRLSISTELLTRPGLLFLDEPTT
GLGKTS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003439ABC_transporter-like
IPR027417P-loop_NTPase