prot_H-elongata_contig66238.14221.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig66238.14221.1
Unique Nameprot_H-elongata_contig66238.14221.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length96
Homology
BLAST of mRNA_H-elongata_contig66238.14221.1 vs. uniprot
Match: A0A6H5KZD5_9PHAE (RF_PROK_I domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZD5_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 4.580e-37
Identity = 71/88 (80.68%), Postives = 78/88 (88.64%), Query Frame = 0
Query:    1 LDEFVLDQLSGIDQTFKELTERLGDPDVLGNPKLLMEVSQERASVEEVVQCYTAYTKATEDLELAKEFFAESSGSGGDTDMKEMAREE 88
            LD+FVL+QLSGID+TF ELTERLGDPDVL NPKL+MEVSQERASVEE+V CY  YTKA EDLE AKE F ESSG+GGD +MKEMAREE
Sbjct:   72 LDDFVLEQLSGIDRTFNELTERLGDPDVLANPKLIMEVSQERASVEEIVNCYAEYTKAAEDLEGAKEMFTESSGAGGDAEMKEMAREE 159          
BLAST of mRNA_H-elongata_contig66238.14221.1 vs. uniprot
Match: A0A4D9DHG8_9STRA (RF_PROK_I domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DHG8_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 1.650e-16
Identity = 46/88 (52.27%), Postives = 60/88 (68.18%), Query Frame = 0
Query:    1 LDEFVLDQLSGIDQTFKELTERLGDPDVLGNPKLLMEVSQERASVEEVVQCYTAYTKATEDLELAKEFFAESSGSGGDTDMKEMAREE 88
            LD FV  +L    +T+KELTERLGDPDV+ NP  LM+V+QER ++EEVV  Y  + K   D+  AK+ F E++G   D +MKEMAR E
Sbjct:    3 LDPFVQTKLESFSRTYKELTERLGDPDVIANPTTLMQVNQERMNIEEVVVSYQEWQKLAADMAGAKQLFNEAAG---DPEMKEMARAE 87          
BLAST of mRNA_H-elongata_contig66238.14221.1 vs. uniprot
Match: A0A7S0UJX6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UJX6_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 2.760e-16
Identity = 48/91 (52.75%), Postives = 60/91 (65.93%), Query Frame = 0
Query:    1 LDEFVLDQLSGIDQTFKELTERLGDPDVLGNPKLLMEVSQERASVEEVVQCYTAYTKATEDLELAKEFFAESSGSGGDTDMKEMAREEASE 91
            LDE ++ +L  I +++  LTERLGDPDVL N KLL +V  +RAS EEVV  Y  YT   E+LE AKE F ++   G D +MKEMAR E  E
Sbjct:   15 LDEGMMGRLENIKRSYNALTERLGDPDVLENTKLLQKVMSDRASSEEVVIAYDEYTGLLEELEEAKELFQDA---GDDPEMKEMARAEMKE 102          
BLAST of mRNA_H-elongata_contig66238.14221.1 vs. uniprot
Match: A0A140ECK3_9STRA (Plastid peptide chain release factor 1 n=1 Tax=Monodopsis sp. MarTras21 TaxID=1745953 RepID=A0A140ECK3_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 4.000e-16
Identity = 46/88 (52.27%), Postives = 59/88 (67.05%), Query Frame = 0
Query:    1 LDEFVLDQLSGIDQTFKELTERLGDPDVLGNPKLLMEVSQERASVEEVVQCYTAYTKATEDLELAKEFFAESSGSGGDTDMKEMAREE 88
            LD FV  +L  I +T+ ELTERLGDPDV+ NP  LM+V+QER  +EEVV  Y  + K  ED+  AK+ F E+   G D ++KEMAR E
Sbjct:   48 LDPFVQSKLDSIKRTYHELTERLGDPDVIANPNSLMQVNQERMKIEEVVLSYQKWQKLGEDMVGAKQLFNEA---GNDVELKEMARAE 132          
BLAST of mRNA_H-elongata_contig66238.14221.1 vs. uniprot
Match: A0A448Z911_9STRA (RF_PROK_I domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z911_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 1.020e-15
Identity = 48/91 (52.75%), Postives = 61/91 (67.03%), Query Frame = 0
Query:    1 LDEFVLDQLSGIDQTFKELTERLGDPDVLGNPKLLMEVSQERASVEEVVQCYTAYTKATEDLELAKEFFAESSGSGGDTDMKEMAREEASE 91
            LDE ++ +L  I +++  LTERLGDPDVLG+ KLL +V  +RAS EEVV  Y  YT   E+LE AKE F ++   G D +MKEMAR E  E
Sbjct:   44 LDEGMMGRLENIKRSYNALTERLGDPDVLGDSKLLQKVMSDRASSEEVVLAYDEYTGLLEELEGAKELFQDA---GDDPEMKEMARAEMKE 131          
BLAST of mRNA_H-elongata_contig66238.14221.1 vs. uniprot
Match: A0A836CKN4_9STRA (Peptide chain release factor 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKN4_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 1.610e-15
Identity = 45/88 (51.14%), Postives = 62/88 (70.45%), Query Frame = 0
Query:    1 LDEFVLDQLSGIDQTFKELTERLGDPDVLGNPKLLMEVSQERASVEEVVQCYTAYTKATEDLELAKEFFAESSGSGGDTDMKEMAREE 88
            LD+FV+ QL GI++++ E+TERLGDPDVL + K LME+S++RA +E VV  +  Y  A   L  A E F ES+G   D +++EMAREE
Sbjct:    3 LDDFVVRQLGGIERSYNEMTERLGDPDVLADSKKLMEISKDRAKMEGVVTMFGEYKDALAQLGGATEMFQESAG---DAELREMAREE 87          
BLAST of mRNA_H-elongata_contig66238.14221.1 vs. uniprot
Match: A0A7S2W3G7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W3G7_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 4.960e-15
Identity = 42/88 (47.73%), Postives = 63/88 (71.59%), Query Frame = 0
Query:    1 LDEFVLDQLSGIDQTFKELTERLGDPDVLGNPKLLMEVSQERASVEEVVQCYTAYTKATEDLELAKEFFAESSGSGGDTDMKEMAREE 88
            ++EF++++L  I++TF ELTERLGDPDV+ +PKL+M ++QER+S+EE V+ Y+ +     +L  AKE    S     D +MKEMA+EE
Sbjct:   41 MNEFMVERLQSIERTFNELTERLGDPDVISDPKLMMSLTQERSSIEETVETYSQWRDMQTELGDAKELVDVSD----DAEMKEMAKEE 124          
BLAST of mRNA_H-elongata_contig66238.14221.1 vs. uniprot
Match: A0A140ECJ9_9STRA (Plastid peptide chain release factor 1 n=1 Tax=Vischeria sp. CAUP Q 202 TaxID=1805947 RepID=A0A140ECJ9_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 6.770e-15
Identity = 44/88 (50.00%), Postives = 62/88 (70.45%), Query Frame = 0
Query:    1 LDEFVLDQLSGIDQTFKELTERLGDPDVLGNPKLLMEVSQERASVEEVVQCYTAYTKATEDLELAKEFFAESSGSGGDTDMKEMAREE 88
            L+ FV  +L GI++++KELTERLGDPDV+ +P+ LM V+QER+ +E VV  Y  Y K  EDL  AK+ F E+     D +++EMAR+E
Sbjct:   39 LEPFVKTKLDGIERSYKELTERLGDPDVIKSPQTLMHVNQERSKIEGVVVAYQQYKKNDEDLLGAKQLFNEAGQE--DPELREMARDE 124          
BLAST of mRNA_H-elongata_contig66238.14221.1 vs. uniprot
Match: A0A7S4F4Q1_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F4Q1_CHRCT)

HSP 1 Score: 77.8 bits (190), Expect = 1.030e-14
Identity = 43/88 (48.86%), Postives = 60/88 (68.18%), Query Frame = 0
Query:    1 LDEFVLDQLSGIDQTFKELTERLGDPDVLGNPKLLMEVSQERASVEEVVQCYTAYTKATEDLELAKEFFAESSGSGGDTDMKEMAREE 88
            +D FVLD+L  + +TF+ LTERL DP++L + + ++ V++ERA +EE V  Y  Y    E L  A+E F E+   GGDT+MKEMAREE
Sbjct:   80 IDRFVLDRLKLVTETFQSLTERLEDPELLSDTQEMLRVTKERAKLEETVMAYKQYLALEEQLNGARELFNEA---GGDTEMKEMAREE 164          
BLAST of mRNA_H-elongata_contig66238.14221.1 vs. uniprot
Match: K9XZS4_STAC7 (Peptide chain release factor 1 n=2 Tax=Stanieria TaxID=102115 RepID=K9XZS4_STAC7)

HSP 1 Score: 76.6 bits (187), Expect = 2.140e-14
Identity = 39/82 (47.56%), Postives = 60/82 (73.17%), Query Frame = 0
Query:    4 FVLDQLSGIDQTFKELTERLGDPDVLGNPKLLMEVSQERASVEEVVQCYTAYTKATEDLELAKEFFAESSGSGGDTDMKEMA 85
            ++L++L  ++QT++ELT RLGDPD+  NP  L ++++ R+S+EE V  Y  + KATE+L  AKE F E+   GGD++M+EMA
Sbjct:    5 YLLEKLKSVEQTYQELTRRLGDPDIATNPDELQKIAKIRSSLEETVNTYEEWKKATEELAGAKEIFKEA---GGDSEMREMA 83          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig66238.14221.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZD5_9PHAE4.580e-3780.68RF_PROK_I domain-containing protein n=2 Tax=Ectoca... [more]
A0A4D9DHG8_9STRA1.650e-1652.27RF_PROK_I domain-containing protein n=3 Tax=Monodo... [more]
A0A7S0UJX6_9STRA2.760e-1652.75Hypothetical protein (Fragment) n=1 Tax=Pseudo-nit... [more]
A0A140ECK3_9STRA4.000e-1652.27Plastid peptide chain release factor 1 n=1 Tax=Mon... [more]
A0A448Z911_9STRA1.020e-1552.75RF_PROK_I domain-containing protein n=1 Tax=Pseudo... [more]
A0A836CKN4_9STRA1.610e-1551.14Peptide chain release factor 1 n=1 Tax=Tribonema m... [more]
A0A7S2W3G7_9STRA4.960e-1547.73Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A140ECJ9_9STRA6.770e-1550.00Plastid peptide chain release factor 1 n=1 Tax=Vis... [more]
A0A7S4F4Q1_CHRCT1.030e-1448.86Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
K9XZS4_STAC72.140e-1447.56Peptide chain release factor 1 n=2 Tax=Stanieria T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.58.410coord: 4..94
e-value: 7.1E-6
score: 27.8
NoneNo IPR availablePANTHERPTHR43804:SF2coord: 4..91
NoneNo IPR availablePANTHERPTHR43804FAMILY NOT NAMEDcoord: 4..91
NoneNo IPR availableSUPERFAMILY75620Release factorcoord: 7..89
IPR005139Peptide chain release factorPFAMPF03462PCRFcoord: 13..91
e-value: 6.1E-9
score: 36.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig66238contigH-elongata_contig66238:2613..3086 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig66238.14221.1mRNA_H-elongata_contig66238.14221.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig66238 2613..3086 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig66238.14221.1 ID=prot_H-elongata_contig66238.14221.1|Name=mRNA_H-elongata_contig66238.14221.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=96bp
LDEFVLDQLSGIDQTFKELTERLGDPDVLGNPKLLMEVSQERASVEEVVQ
CYTAYTKATEDLELAKEFFAESSGSGGDTDMKEMAREEASEKYKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005139PCRF