mRNA_H-elongata_contig66207.14215.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig66207.14215.1 vs. uniprot
Match: D7FNG8_ECTSI (Enoyl-CoA hydratase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNG8_ECTSI) HSP 1 Score: 200 bits (509), Expect = 1.540e-62 Identity = 106/150 (70.67%), Postives = 121/150 (80.67%), Query Frame = 1
Query: 1 RLPLISVAVVDGSAVGGGAELSTCCDFRIAGPESSIRFVQVKMGVSTGWGGGARLTGIVGRRAALRLLAWSPNVTATEGLALGLLDAVASEEGGAQEKTHEFLAGVLEREAHAAVRAVKSVVAAAD-SFPPTIRGFEEDQFAALWGNSHN 447
RLPLISVA +DG+A+GGGAEL+T CDFR+AGPES+IRFVQVKMGVSTGWGGGARL G+VGRRAALRLLAWSP + A E ALGL+DAVA EEGGA EFL GVL ++AH AVRAVK VVAAAD + E D+F+ALWG +HN
Sbjct: 65 RLPLISVAAIDGAAIGGGAELATSCDFRVAGPESNIRFVQVKMGVSTGWGGGARLVGLVGRRAALRLLAWSPPLAADEAAALGLVDAVAEEEGGALAAAREFLGGVLTQDAHEAVRAVKRVVAAADVPVSDRLHRAEADEFSALWGGAHN 214
BLAST of mRNA_H-elongata_contig66207.14215.1 vs. uniprot
Match: A0A835Z365_9STRA (ClpP/crotonase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z365_9STRA) HSP 1 Score: 138 bits (348), Expect = 1.090e-36 Identity = 79/148 (53.38%), Postives = 95/148 (64.19%), Query Frame = 1
Query: 4 LPLISVAVVDGSAVGGGAELSTCCDFRIAGPESSIRFVQVKMGVSTGWGGGARLTGIVGRRAALRLLAWSPNVTATEGLALGLLDAVASEEGGAQEKTHEFLAGVLEREAHAAVRAVKSVVAAADSFPPTIRGFEEDQFAALWGNSHN 447
LPL+SVA V G AVGGGAELST CD+R+ + IRFVQVKMGVSTGWGG ARLT IVG R ALRLLAW ++A+ LGL+D V E A+ + FL + + AVRAVK+ VAAA + P E F ++WG HN
Sbjct: 121 LPLVSVAAVKGPAVGGGAELSTACDYRVMSSAAHIRFVQVKMGVSTGWGGAARLTRIVGSRQALRLLAWGEQLSASAAQQLGLVDLVTEEGEDAETSANTFLEPLTTQPNWRAVRAVKAAVAAASAIPEENVLAERAAFISVWGGDHN 268
BLAST of mRNA_H-elongata_contig66207.14215.1 vs. uniprot
Match: A0A507C399_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507C399_9FUNG) HSP 1 Score: 120 bits (300), Expect = 4.760e-30 Identity = 75/159 (47.17%), Postives = 97/159 (61.01%), Query Frame = 1
Query: 1 RLPLISVAVVDGSAVGGGAELSTCCDFRIAGPESSIRFVQVKMGVSTGWGGGARLTGIVGRRAALRLLAWSPNVTATEGLALGLLDAVASEEGGAQEKTHEFLAGVL--------EREAHAAVRAVKSVVAAADSFPPTIRGFEEDQ--FAALWGNSHN 447
RLP++S A ++G A+GGGAELST CDFR+ +S+RFVQ+ MGV+ GWGGG RLT IVGR ALRLL +P + A E L LGL D VAS + E+ L ++ R +RA+KSVV AD P T +E ++ FA+LWG N
Sbjct: 156 RLPILSCAAIEGFALGGGAELSTSCDFRVMSESASLRFVQILMGVTPGWGGGTRLTRIVGRSNALRLLLSTPALKAPEALTLGLAD-VASNDDQVYEECVRLLHSMMYEQGGKGGSRHPVEVLRAMKSVVNRADEGPDTEASYEYERRVFASLWGQEAN 313
BLAST of mRNA_H-elongata_contig66207.14215.1 vs. uniprot
Match: A0A6P8HRW9_ACTTE (ethylmalonyl-CoA decarboxylase-like isoform X1 n=2 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HRW9_ACTTE) HSP 1 Score: 119 bits (298), Expect = 5.990e-30 Identity = 71/150 (47.33%), Postives = 91/150 (60.67%), Query Frame = 1
Query: 1 RLPLISVAVVDGSAVGGGAELSTCCDFRIAGPESSIRFVQVKMGVSTGWGGGARLTGIVGRRAALRLLAWSPNVTATEGLALGLLDAVASEEGGAQEKTHEFLAGVLEREAHAAVRAVKSVVAAADSFP-PTIRGFEEDQFAALWGNSHN 447
RLPL+S+AVV G AVGGGAEL+T CDFRI ++ +RFV KMG+S GWGGG+RL IVGR AL +L + E L GL+DA E A E ++LA + R+ + +RA+K VVAAAD P E F+ +WG N
Sbjct: 144 RLPLVSLAVVQGKAVGGGAELTTACDFRIMSKDAEMRFVHAKMGLSPGWGGGSRLVKIVGRHKALEILLQCKRMDLEESLKCGLVDAELLESKDALETAADWLAPYV-RDHSSVIRAIKGVVAAADDLPMDEALTVERSFFSTVWGGEAN 292
BLAST of mRNA_H-elongata_contig66207.14215.1 vs. uniprot
Match: A0A1V9ZER0_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZER0_9STRA) HSP 1 Score: 119 bits (297), Expect = 8.590e-30 Identity = 69/150 (46.00%), Postives = 92/150 (61.33%), Query Frame = 1
Query: 1 RLPLISVAVVDGSAVGGGAELSTCCDFRIAGPESSIRFVQVKMGVSTGWGGGARLTGIVGRRAALRLLAWSPNVTATEGLALGLLDAVASEEGGAQEKTHEFLAGVLEREAHAAVRAVKSVVAAADSFP-PTIRGFEEDQFAALWGNSHN 447
+LPLISVA+V+G+A+GGGAEL+T CDFR+ + ++FV MGVS GWGG ARL +VGR+ ALRLLA + V+ LA+GL D V++ E + H FL + + H +R +K VV AD +RG E F LWG N
Sbjct: 146 QLPLISVAIVEGAAMGGGAELTTSCDFRLLAHNARLQFVHANMGVSPGWGGAARLVKLVGRQHALRLLARTEKVSPVHALAIGLADEVSTPEVDVEATAHRFLEPICSKHPHV-IRGLKRVVGHADDIVLDQMRGEEYAVFQELWGGPAN 294
BLAST of mRNA_H-elongata_contig66207.14215.1 vs. uniprot
Match: A0A091QZA5_9GRUI (Ethylmalonyl-CoA decarboxylase (Fragment) n=2 Tax=Mesitornis unicolor TaxID=54374 RepID=A0A091QZA5_9GRUI) HSP 1 Score: 114 bits (286), Expect = 1.850e-29 Identity = 75/152 (49.34%), Postives = 92/152 (60.53%), Query Frame = 1
Query: 1 RLPLISVAVVDGSAVGGGAELSTCCDFRIAGPESSIRFVQVKMGVSTGWGGGARLTGIVGRRAALRLLAWSPNVTATEGLALGLLDAVAS--EEGGAQEKTHEFLAGVLEREAHAAVRAVKSVVAAADSFP-PTIRGFEEDQFAALWGNSHN 447
RLPLISVA+V G AVGGGAEL+T CDFR+ P S IRFVQ MG+ GWGG ARL IVG AALRLL+ + V + L LGL + S +E GA E+ +L+ E A + +RAVK+VV A P E+D F +WG N
Sbjct: 18 RLPLISVALVQGRAVGGGAELTTACDFRLMTPGSEIRFVQKHMGLVPGWGGAARLVRIVGSTAALRLLSGAARVDPKKALCLGLSEETLSSPDETGALEEARAWLSQYTEGPA-SVIRAVKAVVTAGRELPLEAALRTEKDIFGTVWGGPAN 168
BLAST of mRNA_H-elongata_contig66207.14215.1 vs. uniprot
Match: A0A507CK86_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507CK86_9FUNG) HSP 1 Score: 117 bits (293), Expect = 2.910e-29 Identity = 74/157 (47.13%), Postives = 91/157 (57.96%), Query Frame = 1
Query: 1 RLPLISVAVVDGSAVGGGAELSTCCDFRIAGPESSIRFVQVKMGVSTGWGGGARLTGIVGRRAALRLLAWSPNVTATEGLALGLLDAVASEEGGAQEKTHEFLAGVLEREAHAA-------VRAVKSVVAAADSFPPTIRGFEE-DQFAALWGNSHN 447
RLP+ISVA VDG A+GGGAELST CDFR+ +SIRFV + MGV+T +GGG LT IVGR ALRLL SP + A E ALGL D +A ++ +E + E + VRA+K VV+ AD P +E D F LWG N
Sbjct: 125 RLPMISVAAVDGFALGGGAELSTACDFRVVAKNASIRFVHLSMGVTTAFGGGTMLTNIVGRSTALRLLLSSPTLHAEEAFALGLCDQIAQDKQVYEESVRLLNTFLYENSGKGSMRHPVQVVRAMKKVVSMADELPARDSLEQERDLFQTLWGGEAN 281
BLAST of mRNA_H-elongata_contig66207.14215.1 vs. uniprot
Match: A0A7S4B265_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B265_CHRCT) HSP 1 Score: 116 bits (290), Expect = 8.580e-29 Identity = 71/151 (47.02%), Postives = 91/151 (60.26%), Query Frame = 1
Query: 1 RLPLISVAVVDGSAVGGGAELSTCCDFRIAGPESSIRFVQVKMGVSTGWGGGARLTGIVGRRAALRLLAWSPNVTATEGLALGLLDAVASEEGGAQEKTHEFLAGVLEREA--HAAVRAVKSVVAAADSFPPTIRGFEEDQFAALWGNSHN 447
+LP+ISV V+G+A GGGAEL+T D+R+ ++ RFVQ +M VSTGWGG RLTGIVGRR ALRL SP + A LA GL DAVA E + E R A AA+R++K+ VAA S R E FA++W ++ N
Sbjct: 135 QLPMISVCAVNGAAFGGGAELTTATDWRVFASGATARFVQTQMAVSTGWGGAGRLTGIVGRRQALRLFLHSPLIDAEAALASGLADAVAPEGVNPADAAMELFVTPALRAAGSRAAIRSIKAAVAAHSSVSAGARRAETQAFASVWASADN 285
BLAST of mRNA_H-elongata_contig66207.14215.1 vs. uniprot
Match: A0A507CMS1_9FUNG (Uncharacterized protein n=2 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507CMS1_9FUNG) HSP 1 Score: 117 bits (293), Expect = 1.310e-28 Identity = 74/157 (47.13%), Postives = 91/157 (57.96%), Query Frame = 1
Query: 1 RLPLISVAVVDGSAVGGGAELSTCCDFRIAGPESSIRFVQVKMGVSTGWGGGARLTGIVGRRAALRLLAWSPNVTATEGLALGLLDAVASEEGGAQEKTHEFLAGVLEREAHAA-------VRAVKSVVAAADSFPPTIRGFEE-DQFAALWGNSHN 447
RLP+ISVA VDG A+GGGAELST CDFR+ +SIRFV + MGV+T +GGG LT IVGR ALRLL SP + A E ALGL D +A ++ +E + E + VRA+K VV+ AD P +E D F LWG N
Sbjct: 211 RLPMISVAAVDGFALGGGAELSTACDFRVVAKNASIRFVHLSMGVTTAFGGGTMLTNIVGRSTALRLLLSSPTLHAEEAFALGLCDQIAQDKQVYEESVRLLNTFLYENSGKGSMRHPVQVVRAMKKVVSMADELPARDSLEQERDLFQTLWGGEAN 367
BLAST of mRNA_H-elongata_contig66207.14215.1 vs. uniprot
Match: A0A7K9BXD2_9PICI (ECHD1 decarboxylase (Fragment) n=1 Tax=Psilopogon haemacephalus TaxID=2585815 RepID=A0A7K9BXD2_9PICI) HSP 1 Score: 115 bits (289), Expect = 1.410e-28 Identity = 75/152 (49.34%), Postives = 91/152 (59.87%), Query Frame = 1
Query: 1 RLPLISVAVVDGSAVGGGAELSTCCDFRIAGPESSIRFVQVKMGVSTGWGGGARLTGIVGRRAALRLLAWSPNVTATEGLALGLLDAVASEEGGAQ--EKTHEFLAGVLEREAHAAVRAVKSVVAAADSFP-PTIRGFEEDQFAALWGNSHN 447
RLPLISVA+V G A+GGGAEL+T CDFR+ P S IRFV +MG+ GWGGGARL IVG RAALRLL+ + V L LGL + + GG+Q E+ +L+ E A +RA K VV A P E+D F LWG S N
Sbjct: 147 RLPLISVALVQGKALGGGAELTTACDFRLMTPGSEIRFVHKQMGLVPGWGGGARLVPIVGSRAALRLLSGATRVDPETALHLGLSEKTLAAAGGSQALEEAQAWLSQYTEGPG-AVIRAAKLVVRAGRELPLEAALRTEKDVFGTLWGGSAN 297 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig66207.14215.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig66207.14215.1 >prot_H-elongata_contig66207.14215.1 ID=prot_H-elongata_contig66207.14215.1|Name=mRNA_H-elongata_contig66207.14215.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=149bp RLPLISVAVVDGSAVGGGAELSTCCDFRIAGPESSIRFVQVKMGVSTGWGback to top mRNA from alignment at H-elongata_contig66207:1458..2505- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig66207.14215.1 ID=mRNA_H-elongata_contig66207.14215.1|Name=mRNA_H-elongata_contig66207.14215.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1048bp|location=Sequence derived from alignment at H-elongata_contig66207:1458..2505- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig66207:1458..2505- >mRNA_H-elongata_contig66207.14215.1 ID=mRNA_H-elongata_contig66207.14215.1|Name=mRNA_H-elongata_contig66207.14215.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=894bp|location=Sequence derived from alignment at H-elongata_contig66207:1458..2505- (Himanthalia elongata Himel1 dioecious)back to top |