prot_H-elongata_contig66154.14207.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig66154.14207.1
Unique Name	prot_H-elongata_contig66154.14207.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	80

Homology

[Close]

BLAST of mRNA_H-elongata_contig66154.14207.1 vs. uniprot
Match: A0A6H5JT61_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT61_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 1.190e-22
Identity = 46/80 (57.50%), Postives = 58/80 (72.50%), Query Frame = 0

Query:    1 MKEIFLIRGKMETAKSLHQYNITVVVPLGLRIENIRCDKGGEYTEREFKPICNNAGINVEYTAKNTPQENGVSERDGQTL 80
            +KEI+L++ K ET ++LH YN+ V  PLG  IE IRCD+G E    EF   C ++GI +EY A NTPQ+NGVSERDGQTL
Sbjct:  198 IKEIYLLKAKSETVRALHAYNMQVAAPLGRGIEIIRCDRGRENVANEFTTYCMDSGITIEYAATNTPQQNGVSERDGQTL 277

[Close]

BLAST of mRNA_H-elongata_contig66154.14207.1 vs. uniprot
Match: A0A6H5KVF6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF6_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 1.590e-22
Identity = 46/80 (57.50%), Postives = 58/80 (72.50%), Query Frame = 0

Query:    1 MKEIFLIRGKMETAKSLHQYNITVVVPLGLRIENIRCDKGGEYTEREFKPICNNAGINVEYTAKNTPQENGVSERDGQTL 80
            MKE++L+R K +T +++H YN+ V    G RIE IRCDKGGE T  EF+  C N+ I +EY A NTPQ+ GVSERDGQTL
Sbjct:  461 MKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTL 540

[Close]

BLAST of mRNA_H-elongata_contig66154.14207.1 vs. uniprot
Match: A0A6H5K500_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K500_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 1.630e-22
Identity = 46/80 (57.50%), Postives = 58/80 (72.50%), Query Frame = 0

Query:    1 MKEIFLIRGKMETAKSLHQYNITVVVPLGLRIENIRCDKGGEYTEREFKPICNNAGINVEYTAKNTPQENGVSERDGQTL 80
            MKE++L+R K +T +++H YN+ V    G RIE IRCDKGGE T  EF+  C N+ I +EY A NTPQ+ GVSERDGQTL
Sbjct:  137 MKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTL 216

[Close]

BLAST of mRNA_H-elongata_contig66154.14207.1 vs. uniprot
Match: A0A6H5JJR8_9PHAE (Integrase catalytic domain-containing protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR8_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 1.640e-22
Identity = 46/80 (57.50%), Postives = 58/80 (72.50%), Query Frame = 0

Query:    1 MKEIFLIRGKMETAKSLHQYNITVVVPLGLRIENIRCDKGGEYTEREFKPICNNAGINVEYTAKNTPQENGVSERDGQTL 80
            MKE++L+R K +T +++H YN+ V    G RIE IRCDKGGE T  EF+  C N+ I +EY A NTPQ+ GVSERDGQTL
Sbjct:  137 MKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTL 216

[Close]

BLAST of mRNA_H-elongata_contig66154.14207.1 vs. uniprot
Match: A0A6H5KCT3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCT3_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 1.650e-22
Identity = 46/80 (57.50%), Postives = 58/80 (72.50%), Query Frame = 0

Query:    1 MKEIFLIRGKMETAKSLHQYNITVVVPLGLRIENIRCDKGGEYTEREFKPICNNAGINVEYTAKNTPQENGVSERDGQTL 80
            MKE++L+R K +T +++H YN+ V    G RIE IRCDKGGE T  EF+  C N+ I +EY A NTPQ+ GVSERDGQTL
Sbjct:  137 MKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTL 216

[Close]

BLAST of mRNA_H-elongata_contig66154.14207.1 vs. uniprot
Match: A0A6H5JK46_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK46_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 2.600e-22
Identity = 46/80 (57.50%), Postives = 58/80 (72.50%), Query Frame = 0

Query:    1 MKEIFLIRGKMETAKSLHQYNITVVVPLGLRIENIRCDKGGEYTEREFKPICNNAGINVEYTAKNTPQENGVSERDGQTL 80
            MKE++L+R K +T +++H YN+ V    G RIE IRCDKGGE T  EF+  C N+ I +EY A NTPQ+ GVSERDGQTL
Sbjct:  150 MKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAAINTPQQLGVSERDGQTL 229

[Close]

BLAST of mRNA_H-elongata_contig66154.14207.1 vs. uniprot
Match: A0A6H5KCM0_9PHAE (Integrase catalytic domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCM0_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 2.790e-22
Identity = 46/80 (57.50%), Postives = 58/80 (72.50%), Query Frame = 0

Query:    1 MKEIFLIRGKMETAKSLHQYNITVVVPLGLRIENIRCDKGGEYTEREFKPICNNAGINVEYTAKNTPQENGVSERDGQTL 80
            MKE++L+R K +T +++H YN+ V    G RIE IRCDKGGE T  EF+  C N+ I +EY A NTPQ+ GVSERDGQTL
Sbjct:  137 MKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDNCKNSAIKLEYAATNTPQQLGVSERDGQTL 216

[Close]

BLAST of mRNA_H-elongata_contig66154.14207.1 vs. uniprot
Match: A0A6H5JSL6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSL6_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 3.050e-22
Identity = 46/80 (57.50%), Postives = 58/80 (72.50%), Query Frame = 0

Query:    1 MKEIFLIRGKMETAKSLHQYNITVVVPLGLRIENIRCDKGGEYTEREFKPICNNAGINVEYTAKNTPQENGVSERDGQTL 80
            MKE++L+R K +T +++H YN+ V    G RIE IRCDKGGE T  EF+  C N+ I +EY A NTPQ+ GVSERDGQTL
Sbjct:  333 MKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIEAIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTL 412

[Close]

BLAST of mRNA_H-elongata_contig66154.14207.1 vs. uniprot
Match: A0A6H5JRJ1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ1_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 4.180e-22
Identity = 46/80 (57.50%), Postives = 57/80 (71.25%), Query Frame = 0

Query:    1 MKEIFLIRGKMETAKSLHQYNITVVVPLGLRIENIRCDKGGEYTEREFKPICNNAGINVEYTAKNTPQENGVSERDGQTL 80
            +KE++L+R K  T +++H YNI V    G RIE IRCDKGGE T  EF+  C N+ I +EY A NTPQ+ GVSERDGQTL
Sbjct:  137 VKEVYLLRKKSNTTEAVHTYNICVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTL 216

[Close]

BLAST of mRNA_H-elongata_contig66154.14207.1 vs. uniprot
Match: A0A6H5K611_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K611_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 5.090e-22
Identity = 45/80 (56.25%), Postives = 58/80 (72.50%), Query Frame = 0

Query:    1 MKEIFLIRGKMETAKSLHQYNITVVVPLGLRIENIRCDKGGEYTEREFKPICNNAGINVEYTAKNTPQENGVSERDGQTL 80
            MKE++L+R K +T +++H  N+ V    G RIE IRCDKGGE T  EF+  C N+ I +EY A NTPQ++GVSERDGQTL
Sbjct:  270 MKEVYLLRKKSDTTEAVHTCNMRVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQSGVSERDGQTL 349

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig66154.14207.1 vs. uniprot

BLAST of mRNA_H-elongata_contig66154.14207.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JT61_9PHAE	1.190e-22	57.50	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KVF6_9PHAE	1.590e-22	57.50	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5K500_9PHAE	1.630e-22	57.50	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JJR8_9PHAE	1.640e-22	57.50	Integrase catalytic domain-containing protein n=11...	[more]
A0A6H5KCT3_9PHAE	1.650e-22	57.50	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JK46_9PHAE	2.600e-22	57.50	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KCM0_9PHAE	2.790e-22	57.50	Integrase catalytic domain-containing protein n=5 ...	[more]
A0A6H5JSL6_9PHAE	3.050e-22	57.50	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JRJ1_9PHAE	4.180e-22	57.50	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5K611_9PHAE	5.090e-22	56.25	Integrase catalytic domain-containing protein n=1 ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 28..80 e-value: 5.7E-10 score: 39.4
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 1..80 score: 10.896
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 1..80 e-value: 1.2E-9 score: 39.8
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 10..79

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig66154	contig	H-elongata_contig66154:960..1199 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig66154.14207.1	mRNA_H-elongata_contig66154.14207.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig66154 960..1502 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig66154.14207.1 ID=prot_H-elongata_contig66154.14207.1|Name=mRNA_H-elongata_contig66154.14207.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=80bp
MKEIFLIRGKMETAKSLHQYNITVVVPLGLRIENIRCDKGGEYTEREFKP
ICNNAGINVEYTAKNTPQENGVSERDGQTL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001584	Integrase_cat-core
IPR036397	RNaseH_sf
IPR012337	RNaseH-like_sf