mRNA_H-elongata_contig66134.14206.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig66134.14206.1 vs. uniprot
Match: D7G3Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Z8_ECTSI) HSP 1 Score: 127 bits (318), Expect = 1.870e-32 Identity = 56/67 (83.58%), Postives = 60/67 (89.55%), Query Frame = 1
Query: 1 QEHENRFWTTVVFCFSGALVFVHDSPVALGQWSPTLGFVCVTLFTYTVHSLDRQFHRSHIGRAPNFR 201
QEHENRFWTTV FCFSGALVFVHDSPVALGQWSP LGF+ V +FT++VHS DRQ HRS IGRAPNFR
Sbjct: 63 QEHENRFWTTVAFCFSGALVFVHDSPVALGQWSPVLGFLFVMMFTFSVHSYDRQLHRSRIGRAPNFR 129
BLAST of mRNA_H-elongata_contig66134.14206.1 vs. uniprot
Match: A0A6H5K785_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K785_9PHAE) HSP 1 Score: 104 bits (259), Expect = 7.240e-25 Identity = 45/54 (83.33%), Postives = 49/54 (90.74%), Query Frame = 1
Query: 1 QEHENRFWTTVVFCFSGALVFVHDSPVALGQWSPTLGFVCVTLFTYTVHSLDRQ 162
QEHENRFWTTV FCFSGALVFVHDSPVALGQWSP LGF+ V +FT++VHS DRQ
Sbjct: 63 QEHENRFWTTVAFCFSGALVFVHDSPVALGQWSPVLGFLFVMMFTFSVHSYDRQ 116
BLAST of mRNA_H-elongata_contig66134.14206.1 vs. uniprot
Match: A0A0P1AH66_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AH66_PLAHL) HSP 1 Score: 83.6 bits (205), Expect = 3.500e-17 Identity = 37/67 (55.22%), Postives = 45/67 (67.16%), Query Frame = 1
Query: 1 QEHENRFWTTVVFCFSGALVFVHDSPVALGQWSPTLGFVCVTLFTYTVHSLDRQFHRSHIGRAPNFR 201
QE ENRFWT F FS A+++V DSP+A+GQWS TLG V V +FT +VH DR HR I R P +
Sbjct: 95 QEFENRFWTGTAFLFSAAVLYVKDSPLAVGQWSSTLGLVLVFIFTMSVHFFDRFLHRQEISRRPKLK 161
BLAST of mRNA_H-elongata_contig66134.14206.1 vs. uniprot
Match: F0WSR9_9STRA (Uncharacterized protein AlNc14C237G9414 n=2 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WSR9_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 1.220e-16 Identity = 34/62 (54.84%), Postives = 45/62 (72.58%), Query Frame = 1
Query: 1 QEHENRFWTTVVFCFSGALVFVHDSPVALGQWSPTLGFVCVTLFTYTVHSLDRQFHRSHIGR 186
QE ENRFWTT F FS A++++ DSP+A+G+W P+LG++ VT FT +H LDR HR I R
Sbjct: 97 QEFENRFWTTTAFLFSTAVMYIRDSPLAIGRWHPSLGWILVTTFTLFIHFLDRFIHRQAISR 158
BLAST of mRNA_H-elongata_contig66134.14206.1 vs. uniprot
Match: D0P0X3_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0P0X3_PHYIT) HSP 1 Score: 80.9 bits (198), Expect = 3.090e-16 Identity = 36/67 (53.73%), Postives = 44/67 (65.67%), Query Frame = 1
Query: 1 QEHENRFWTTVVFCFSGALVFVHDSPVALGQWSPTLGFVCVTLFTYTVHSLDRQFHRSHIGRAPNFR 201
QE ENRFWT F FS AL+++ DSP+A+GQW+ TLG V V FT +VH DR HR I R P +
Sbjct: 82 QEFENRFWTGTAFMFSAALLYIKDSPLAVGQWNSTLGLVLVFGFTMSVHFFDRFLHRQEISRRPRLK 148
BLAST of mRNA_H-elongata_contig66134.14206.1 vs. uniprot
Match: A0A833SGW7_PHYIN (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=A0A833SGW7_PHYIN) HSP 1 Score: 80.9 bits (198), Expect = 3.100e-16 Identity = 36/67 (53.73%), Postives = 44/67 (65.67%), Query Frame = 1
Query: 1 QEHENRFWTTVVFCFSGALVFVHDSPVALGQWSPTLGFVCVTLFTYTVHSLDRQFHRSHIGRAPNFR 201
QE ENRFWT F FS AL+++ DSP+A+GQW+ TLG V V FT +VH DR HR I R P +
Sbjct: 105 QEFENRFWTGTAFMFSAALLYIKDSPLAVGQWNSTLGLVLVFGFTMSVHFFDRFLHRQEISRRPRLK 171
BLAST of mRNA_H-elongata_contig66134.14206.1 vs. uniprot
Match: M4C4Y7_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C4Y7_HYAAE) HSP 1 Score: 80.1 bits (196), Expect = 5.790e-16 Identity = 35/67 (52.24%), Postives = 44/67 (65.67%), Query Frame = 1
Query: 1 QEHENRFWTTVVFCFSGALVFVHDSPVALGQWSPTLGFVCVTLFTYTVHSLDRQFHRSHIGRAPNFR 201
QE ENRFWT F FS A++++ DSP+A+GQW+ TLG V V FT +VH DR HR I R P +
Sbjct: 37 QEFENRFWTGTAFLFSAAVLYIRDSPLAVGQWNSTLGLVLVFGFTMSVHYFDRFLHRQEISRRPRLK 103
BLAST of mRNA_H-elongata_contig66134.14206.1 vs. uniprot
Match: A0A662X9P1_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X9P1_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 5.790e-16 Identity = 35/64 (54.69%), Postives = 43/64 (67.19%), Query Frame = 1
Query: 1 QEHENRFWTTVVFCFSGALVFVHDSPVALGQWSPTLGFVCVTLFTYTVHSLDRQFHRSHIGRAP 192
QE ENRFWT F FS A++++ DSP+A+GQW+ TLG V V FT +VH DR HR I R P
Sbjct: 111 QEFENRFWTGTAFLFSAAVLYIKDSPLAVGQWNSTLGLVLVFSFTMSVHYFDRFLHRQEISRRP 174
BLAST of mRNA_H-elongata_contig66134.14206.1 vs. uniprot
Match: A0A2P4YCM6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YCM6_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 6.210e-16 Identity = 35/67 (52.24%), Postives = 44/67 (65.67%), Query Frame = 1
Query: 1 QEHENRFWTTVVFCFSGALVFVHDSPVALGQWSPTLGFVCVTLFTYTVHSLDRQFHRSHIGRAPNFR 201
QE ENRFWT F FS A++++ DSP+A+GQW+ TLG V V FT +VH DR HR I R P +
Sbjct: 110 QEFENRFWTGTAFMFSAAVLYIKDSPLAVGQWNSTLGLVLVFGFTMSVHFFDRFLHRQEISRRPRLK 176
BLAST of mRNA_H-elongata_contig66134.14206.1 vs. uniprot
Match: D0N9P7_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N9P7_PHYIT) HSP 1 Score: 79.7 bits (195), Expect = 7.860e-16 Identity = 36/67 (53.73%), Postives = 44/67 (65.67%), Query Frame = 1
Query: 1 QEHENRFWTTVVFCFSGALVFVHDSPVALGQWSPTLGFVCVTLFTYTVHSLDRQFHRSHIGRAPNFR 201
QE ENRFWT F FS A+V++ DSP+A+GQWS +LG V V FT +VH DR HR I R P +
Sbjct: 37 QEFENRFWTGTAFLFSAAVVYIKDSPLAVGQWSSSLGLVLVFGFTASVHYFDRFLHRQKISRRPRLK 103 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig66134.14206.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig66134.14206.1 >prot_H-elongata_contig66134.14206.1 ID=prot_H-elongata_contig66134.14206.1|Name=mRNA_H-elongata_contig66134.14206.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=68bp QEHENRFWTTVVFCFSGALVFVHDSPVALGQWSPTLGFVCVTLFTYTVHSback to top mRNA from alignment at H-elongata_contig66134:1699..2291+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig66134.14206.1 ID=mRNA_H-elongata_contig66134.14206.1|Name=mRNA_H-elongata_contig66134.14206.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=593bp|location=Sequence derived from alignment at H-elongata_contig66134:1699..2291+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig66134:1699..2291+ >mRNA_H-elongata_contig66134.14206.1 ID=mRNA_H-elongata_contig66134.14206.1|Name=mRNA_H-elongata_contig66134.14206.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=408bp|location=Sequence derived from alignment at H-elongata_contig66134:1699..2291+ (Himanthalia elongata Himel1 dioecious)back to top |