prot_H-elongata_contig6607.14198.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig6607.14198.1
Unique Nameprot_H-elongata_contig6607.14198.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length348
Homology
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BLAST of mRNA_H-elongata_contig6607.14198.1 vs. uniprot
Match: D8LEM5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEM5_ECTSI)

HSP 1 Score: 84.3 bits (207), Expect = 4.490e-14
Identity = 140/400 (35.00%), Postives = 167/400 (41.75%), Query Frame = 0 
Query:    1 DRWGRQRGGRKARWDKLDRQPSALKSRLRSANS----------------VREDVHLEA-EDTLVF-------SAFSTRGGRGIYGLXXXXXXXXXXXXXXXXXQNDEDHGARDLAFARVSLDRDDTTGVHHEGGD----------PHTSFP--KPYQHQQEKKQQLEEVHGTLSQESSVETDGGVGWGHGRGHHHASDA-AKTPEPPSLAWDVG------QCAIGQNAWIKANGGLPASRGSGGGGNARLSSLKSPAGGGGGLSRSGL-----------GSFRGVTSPPLHRRLSAPAAAGVGXXXGVGAASPLERRGKGLNQRYASPAAHKRGGSQGADLARLRASKSW-DAGSGSRDGDDXXXXXXXXXXXXSLFETVFKDKLPSLTPKKTPQVSTPR 345
            DRWGRQRGGRKARWDK DRQPSA KSRLRS N                 V ED  L+A E+   F       +A +      + G                   +D   G    + A V   R   TG    GGD           HT  P  +  Q                +   +V   GG             DA A +P P + A  V         A G         G+  SR    G   R SSL+SP    GGLSR+G            GS+RG + PPLHRRLS+PA  G G               KG  QR    +     G++G   A+ +   S  DAG   R  + XXXXXXXXXXXXSLFE+VFKDKLPSLTP+K P  +TPR
Sbjct:   36 DRWGRQRGGRKARWDKWDRQPSAFKSRLRSGNFAAAAAGXXGVGLGGGVVDEDAVLDAAEEAFAFVDAATMKAAAAATAANAVLGSEGTSSDEGVGGGAGAEGDSDAATGVPACSVAVVDGGR--VTG----GGDVPPEAAAGDGAHTPSPTRRALQRXXXXXXXXXXXXPAATAAPAVLDAGGC----------TDDAVAASPAPATTATVVSTPSSARSIANGVXXXXXXXXGVSGSRSKTVGSGGRRSSLRSP----GGLSRAGSKGSGVGGGLGSGSYRG-SPPPLHRRLSSPAGVGSGK--------------KGQRQRQVGGSTAVGVGARGLGSAKKKKQASGSDAGRQGR-AEXXXXXXXXXXXXXSLFESVFKDKLPSLTPRKAPP-ATPR 398
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6607.14198.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LEM5_ECTSI4.490e-1435.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 120..140

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6607contigH-elongata_contig6607:2064..3107 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6607.14198.1mRNA_H-elongata_contig6607.14198.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig6607 2064..3107 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig6607.14198.1 ID=prot_H-elongata_contig6607.14198.1|Name=mRNA_H-elongata_contig6607.14198.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=348bp
DRWGRQRGGRKARWDKLDRQPSALKSRLRSANSVREDVHLEAEDTLVFSA
FSTRGGRGIYGLGVTGVGSDDTDGDDGDNQNDEDHGARDLAFARVSLDRD
DTTGVHHEGGDPHTSFPKPYQHQQEKKQQLEEVHGTLSQESSVETDGGVG
WGHGRGHHHASDAAKTPEPPSLAWDVGQCAIGQNAWIKANGGLPASRGSG
GGGNARLSSLKSPAGGGGGLSRSGLGSFRGVTSPPLHRRLSAPAAAGVGG
GGGVGAASPLERRGKGLNQRYASPAAHKRGGSQGADLARLRASKSWDAGS
GSRDGDDDEMARTTPPPPPSLFETVFKDKLPSLTPKKTPQVSTPRQG*
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