mRNA_H-elongata_contig66019.14191.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig66019.14191.1 vs. uniprot
Match: A0A6H5KXN5_9PHAE (CoA carboxyltransferase C-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXN5_9PHAE) HSP 1 Score: 425 bits (1092), Expect = 2.130e-149 Identity = 208/232 (89.66%), Postives = 221/232 (95.26%), Query Frame = 1
Query: 25 QVIARLVDGSRFHEFKERYGTTIVTGFGHLYGQSVGIVANNGVLFSESSLKAAHFVELCCQRGIPLLFLQNITGFMVGKRYEHQGIAKDGAKLVTAVACAKVPKITCVIGGSYGAGNYGMCGRAYSPRFLFMWPNARISVMGGEQAAKVLAQVVEKDKRAARGETLGVEDEANIVEPLLEKFERESSPYFSSARLWDDGVIDPADTRRVLGLSLRVATKHAAPRTSFGVFRM 720
+VIARLVDGSRFHEFKERYGTT+VTGFGHLYGQSVGIVANNGVLFSES+LKAAHFVELCCQRGIP++FLQNITGFMVGKRYEHQGIAKDGAKLV AV+CAKVPKITCVIGGSYGAGNYGMCGRAYSPRFLFMWPNARISVMGGEQAA VLAQV EKDKR RGETLG E+EA I +P+L KFERESSPY+SS+RLWDDGVIDPADTR+VLGL+L VATK AAPRTSFGVFRM
Sbjct: 17 KVIARLVDGSRFHEFKERYGTTVVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGIPIIFLQNITGFMVGKRYEHQGIAKDGAKLVAAVSCAKVPKITCVIGGSYGAGNYGMCGRAYSPRFLFMWPNARISVMGGEQAANVLAQV-EKDKRQRRGETLGEEEEAKIKDPILNKFERESSPYYSSSRLWDDGVIDPADTRKVLGLTLHVATKDAAPRTSFGVFRM 247
BLAST of mRNA_H-elongata_contig66019.14191.1 vs. uniprot
Match: D7G8N5_ECTSI (Methylcrotonoyl-CoA carboxylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8N5_ECTSI) HSP 1 Score: 419 bits (1077), Expect = 2.300e-142 Identity = 206/232 (88.79%), Postives = 219/232 (94.40%), Query Frame = 1
Query: 25 QVIARLVDGSRFHEFKERYGTTIVTGFGHLYGQSVGIVANNGVLFSESSLKAAHFVELCCQRGIPLLFLQNITGFMVGKRYEHQGIAKDGAKLVTAVACAKVPKITCVIGGSYGAGNYGMCGRAYSPRFLFMWPNARISVMGGEQAAKVLAQVVEKDKRAARGETLGVEDEANIVEPLLEKFERESSPYFSSARLWDDGVIDPADTRRVLGLSLRVATKHAAPRTSFGVFRM 720
+VIARLVDGSRFHEFKERYGTT+VTGFGHLYGQSVGIVANNGVLFSES+LKAAHFVELCCQRGIP++FLQNITGFMVGKRYEHQGIAKDGAKLV AV+CAKVPKITCVIGGSYGAGNYGMCGRAYSPRFLFMWPNARISVMGGEQAA VLAQV EKDKR GETLG E+EA I +P+L KFERESSPY+SS+RLWDDGVIDPADTR+VLGL+L VATK AAP TSFGVFRM
Sbjct: 340 KVIARLVDGSRFHEFKERYGTTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGIPIIFLQNITGFMVGKRYEHQGIAKDGAKLVAAVSCAKVPKITCVIGGSYGAGNYGMCGRAYSPRFLFMWPNARISVMGGEQAANVLAQV-EKDKRERSGETLGEEEEAKIKDPILNKFERESSPYYSSSRLWDDGVIDPADTRKVLGLTLHVATKDAAPPTSFGVFRM 570
BLAST of mRNA_H-elongata_contig66019.14191.1 vs. uniprot
Match: A0A835Z7I2_9STRA (Methylcrotonoyl-CoA carboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7I2_9STRA) HSP 1 Score: 359 bits (921), Expect = 1.740e-119 Identity = 177/232 (76.29%), Postives = 200/232 (86.21%), Query Frame = 1
Query: 25 QVIARLVDGSRFHEFKERYGTTIVTGFGHLYGQSVGIVANNGVLFSESSLKAAHFVELCCQRGIPLLFLQNITGFMVGKRYEHQGIAKDGAKLVTAVACAKVPKITCVIGGSYGAGNYGMCGRAYSPRFLFMWPNARISVMGGEQAAKVLAQVVEKDKRAARGETLGVEDEANIVEPLLEKFERESSPYFSSARLWDDGVIDPADTRRVLGLSLRVATKHAAPRTSFGVFRM 720
+V+AR++DGSRF EFK R+GTTIVTGFGHLYGQ VGIVANNGVLFSES+LKAAHFVELCCQRG+PL+FLQNITGFMVG+++E++GIAK GAK+VTAVACAKVPKITCVIGGSYGAGNYGMCGR+ SPRFLFMWPNARI VMG EQAA VL QV EKDKRAA+G L E+EA + PLL + ESS Y+SSARLWDDGVIDP DTRRVLG+S+ A + T FGVFRM
Sbjct: 287 KVLARVLDGSRFSEFKARFGTTIVTGFGHLYGQQVGIVANNGVLFSESALKAAHFVELCCQRGVPLVFLQNITGFMVGRKHENEGIAKHGAKMVTAVACAKVPKITCVIGGSYGAGNYGMCGRSMSPRFLFMWPNARIGVMGAEQAANVLTQV-EKDKRAAKGLALSPEEEAAMKAPLLSRLGAESSAYYSSARLWDDGVIDPRDTRRVLGMSVAAAMQAPPEPTKFGVFRM 517
BLAST of mRNA_H-elongata_contig66019.14191.1 vs. uniprot
Match: A0A7S2BWJ0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BWJ0_9STRA) HSP 1 Score: 345 bits (886), Expect = 8.470e-118 Identity = 168/231 (72.73%), Postives = 193/231 (83.55%), Query Frame = 1
Query: 28 VIARLVDGSRFHEFKERYGTTIVTGFGHLYGQSVGIVANNGVLFSESSLKAAHFVELCCQRGIPLLFLQNITGFMVGKRYEHQGIAKDGAKLVTAVACAKVPKITCVIGGSYGAGNYGMCGRAYSPRFLFMWPNARISVMGGEQAAKVLAQVVEKDKRAARGETLGVEDEANIVEPLLEKFERESSPYFSSARLWDDGVIDPADTRRVLGLSLRVATKHAAPRTSFGVFRM 720
VIAR+VDGSRFHEFK +YGTT+VTGF +YGQ VGI+ANNG+LFSESSLKAAHF+ELCCQRG+PLLFLQNITGFMVG++YE++GIAK+GAKLVTAV+CA VPKIT +IGGSYGAGNYGMCGRA+SPRFLFMWPN+RISVMGGEQAA VLA V D RGE E EA P+L K+E ESS Y+SSARLWDDGVI+P TR LGL+ A ++ +P T FGVFRM
Sbjct: 33 VIARIVDGSRFHEFKAQYGTTMVTGFAEIYGQRVGIIANNGILFSESSLKAAHFIELCCQRGVPLLFLQNITGFMVGQKYENEGIAKNGAKLVTAVSCASVPKITVIIGGSYGAGNYGMCGRAFSPRFLFMWPNSRISVMGGEQAAGVLA-TVHGDNLERRGEEFTAEAEAEFKAPILAKYEGESSCYYSSARLWDDGVIEPTKTRETLGLAFAAALENPSPPTKFGVFRM 262
BLAST of mRNA_H-elongata_contig66019.14191.1 vs. uniprot
Match: A0A7S2EAG9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EAG9_9STRA) HSP 1 Score: 343 bits (881), Expect = 4.710e-117 Identity = 169/233 (72.53%), Postives = 199/233 (85.41%), Query Frame = 1
Query: 28 VIARLVDGSRFHEFKERYGTTIVTGFGHLYGQSVGIVANNGVLFSESSLKAAHFVELCCQRGIPLLFLQNITGFMVGKRYEHQGIAKDGAKLVTAVACAKVPKITCVIGGSYGAGNYGMCGRAYSPRFLFMWPNARISVMGGEQAAKVLAQVVEKDKRAARGETLGVEDEANIVEPLLEKFERESSPYFSSARLWDDGVIDPADTRRVLGLSLRVATKHAAP--RTSFGVFRM 720
V+AR++DGSRFHEFK +YG TIVTGFG +YGQ +G+VANNG+LFSESSLKAAHFVELC QRGIP+LF+QNITGFMVGK+YE++GIAK+GAKLVTAVA +KVPK+T VIGGSYGAGNYGMCGRAYSPRFL+MWPNARI VMGGEQAA VL+ V++D +G T E+E + +P+LEK+ERESS Y+SSARLWDDG+IDPADTR VLG SL VA++ T FGVFRM
Sbjct: 30 VLARILDGSRFHEFKSQYGQTIVTGFGSIYGQPIGVVANNGILFSESSLKAAHFVELCSQRGIPILFVQNITGFMVGKKYENEGIAKNGAKLVTAVATSKVPKLTLVIGGSYGAGNYGMCGRAYSPRFLYMWPNARIGVMGGEQAAGVLS-TVQRDNIELKGGTWSNEEEEDFKKPILEKYERESSAYYSSARLWDDGIIDPADTRVVLGCSLAVASRVGCTPNETKFGVFRM 261
BLAST of mRNA_H-elongata_contig66019.14191.1 vs. uniprot
Match: K3X1F2_GLOUD (Methylcrotonoyl-CoA carboxylase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1F2_GLOUD) HSP 1 Score: 352 bits (903), Expect = 2.230e-116 Identity = 172/232 (74.14%), Postives = 197/232 (84.91%), Query Frame = 1
Query: 25 QVIARLVDGSRFHEFKERYGTTIVTGFGHLYGQSVGIVANNGVLFSESSLKAAHFVELCCQRGIPLLFLQNITGFMVGKRYEHQGIAKDGAKLVTAVACAKVPKITCVIGGSYGAGNYGMCGRAYSPRFLFMWPNARISVMGGEQAAKVLAQVVEKDKRAARGETLGVEDEANIVEPLLEKFERESSPYFSSARLWDDGVIDPADTRRVLGLSLRVATKHAAPRTSFGVFRM 720
+VIAR+VDGS+F EFK+ YGTTIVTGF LYG VGI+ANNG+LFSESS+KAAHF+ELC QRGIPLLFLQNITGFMVGK+ EH GIAKDGAK+V AV+CAKVPKITC+IGGSYGAGNYGMCGRA+SPRFL+MWPNARISVMGGEQAA VLAQV ++D G+T E+EA +P L+K+E+ESS YFS+ARLWDDG+IDP DTR+VLGLSL A A T FGVFRM
Sbjct: 317 KVIARIVDGSKFDEFKKYYGTTIVTGFAKLYGNPVGIIANNGILFSESSVKAAHFIELCSQRGIPLLFLQNITGFMVGKKAEHGGIAKDGAKMVMAVSCAKVPKITCIIGGSYGAGNYGMCGRAFSPRFLYMWPNARISVMGGEQAAGVLAQV-QRDNLERAGKTWTAEEEAAFKQPTLDKYEKESSAYFSTARLWDDGIIDPKDTRKVLGLSLSAALNEHAQETKFGVFRM 547
BLAST of mRNA_H-elongata_contig66019.14191.1 vs. uniprot
Match: M4BBK0_HYAAE (Methylcrotonoyl-CoA carboxylase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BBK0_HYAAE) HSP 1 Score: 352 bits (902), Expect = 5.660e-116 Identity = 174/232 (75.00%), Postives = 195/232 (84.05%), Query Frame = 1
Query: 25 QVIARLVDGSRFHEFKERYGTTIVTGFGHLYGQSVGIVANNGVLFSESSLKAAHFVELCCQRGIPLLFLQNITGFMVGKRYEHQGIAKDGAKLVTAVACAKVPKITCVIGGSYGAGNYGMCGRAYSPRFLFMWPNARISVMGGEQAAKVLAQVVEKDKRAARGETLGVEDEANIVEPLLEKFERESSPYFSSARLWDDGVIDPADTRRVLGLSLRVATKHAAPRTSFGVFRM 720
+VIAR+VDGSRF EFK+ YG TIVTGF LYG VGI+ANNG+LFSESS+KAAHF+ELCCQRGIPLLFLQNITGFMVGK+ EH GIAKDGAK+V AVA AKVPKITCVIGGSYGAGNYGMCGRA+SPRFL+MWPNARISVMGGEQAA VLAQV ++D R ET EDEA +P+L+K+E ESS Y+S+ARLWDDG+IDP DTR+VLGLSL A T FGVFRM
Sbjct: 337 KVIARIVDGSRFDEFKKEYGATIVTGFARLYGNPVGIIANNGILFSESSVKAAHFIELCCQRGIPLLFLQNITGFMVGKKAEHGGIAKDGAKMVMAVANAKVPKITCVIGGSYGAGNYGMCGRAFSPRFLYMWPNARISVMGGEQAAGVLAQV-QRDNYERRKETWSDEDEAAFKQPILDKYEVESSAYYSTARLWDDGIIDPKDTRKVLGLSLSAALNEEPQETKFGVFRM 567
BLAST of mRNA_H-elongata_contig66019.14191.1 vs. uniprot
Match: A0A8K1CHG8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHG8_PYTOL) HSP 1 Score: 351 bits (900), Expect = 1.310e-115 Identity = 171/232 (73.71%), Postives = 195/232 (84.05%), Query Frame = 1
Query: 25 QVIARLVDGSRFHEFKERYGTTIVTGFGHLYGQSVGIVANNGVLFSESSLKAAHFVELCCQRGIPLLFLQNITGFMVGKRYEHQGIAKDGAKLVTAVACAKVPKITCVIGGSYGAGNYGMCGRAYSPRFLFMWPNARISVMGGEQAAKVLAQVVEKDKRAARGETLGVEDEANIVEPLLEKFERESSPYFSSARLWDDGVIDPADTRRVLGLSLRVATKHAAPRTSFGVFRM 720
+VIAR+VDGS+F EFK+ YGTTIVTGF LYG VGI+ANNG+LFSESS+KAAHF+ELC QRGIPLLFLQNITGFMVGK+ EH GIAKDGAKLVTAV+CAKVPKITC+IGGSYGAGNYGMCGRA+SPRFL+MWPNARISVMGGEQAA VLAQV ++D G+T E+E +P LEK+E ESS Y+S+ARLWDDG+IDP DTR++LGLSL A T FGVFRM
Sbjct: 342 KVIARIVDGSKFDEFKQHYGTTIVTGFARLYGNPVGIIANNGILFSESSVKAAHFIELCTQRGIPLLFLQNITGFMVGKKAEHGGIAKDGAKLVTAVSCAKVPKITCIIGGSYGAGNYGMCGRAFSPRFLYMWPNARISVMGGEQAAGVLAQV-QRDNIERAGKTWSQEEEDAFKKPTLEKYEHESSAYYSTARLWDDGIIDPKDTRKILGLSLSAALNEEPKETKFGVFRM 572
BLAST of mRNA_H-elongata_contig66019.14191.1 vs. uniprot
Match: A0A0P1APM1_PLAHL (Methylcrotonoyl-CoA carboxylase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1APM1_PLAHL) HSP 1 Score: 350 bits (897), Expect = 3.210e-115 Identity = 170/232 (73.28%), Postives = 196/232 (84.48%), Query Frame = 1
Query: 25 QVIARLVDGSRFHEFKERYGTTIVTGFGHLYGQSVGIVANNGVLFSESSLKAAHFVELCCQRGIPLLFLQNITGFMVGKRYEHQGIAKDGAKLVTAVACAKVPKITCVIGGSYGAGNYGMCGRAYSPRFLFMWPNARISVMGGEQAAKVLAQVVEKDKRAARGETLGVEDEANIVEPLLEKFERESSPYFSSARLWDDGVIDPADTRRVLGLSLRVATKHAAPRTSFGVFRM 720
+VIAR+VDGSR EFK+ YGTTIVTGF LYG VGIVANNG+LFS+SS+KAAHF+ELCCQRGIPLLFLQNITGFMVGK+ EH GIAKDGAK+V AVA AKVPKITC+IGGSYGAGNYGMCGRA+SPRFL+MWPNARISVMGGEQAA VLAQV +++ R ET E E +P+L+K+++ESS Y+S+ARLWDDG+IDP DTR+VLGLSL V P+T FGVFRM
Sbjct: 337 KVIARIVDGSRLDEFKKEYGTTIVTGFARLYGNPVGIVANNGILFSDSSVKAAHFIELCCQRGIPLLFLQNITGFMVGKKAEHGGIAKDGAKMVMAVANAKVPKITCIIGGSYGAGNYGMCGRAFSPRFLYMWPNARISVMGGEQAAGVLAQV-QRENYERRKETWSAEQETAFKQPILDKYDQESSAYYSTARLWDDGIIDPKDTRKVLGLSLSVGLHEMPPKTQFGVFRM 567
BLAST of mRNA_H-elongata_contig66019.14191.1 vs. uniprot
Match: A0A7K8GAA9_ORTSP (MCCB carboxylase (Fragment) n=6 Tax=Neognathae TaxID=8825 RepID=A0A7K8GAA9_ORTSP) HSP 1 Score: 340 bits (871), Expect = 5.220e-115 Identity = 163/232 (70.26%), Postives = 189/232 (81.47%), Query Frame = 1
Query: 25 QVIARLVDGSRFHEFKERYGTTIVTGFGHLYGQSVGIVANNGVLFSESSLKAAHFVELCCQRGIPLLFLQNITGFMVGKRYEHQGIAKDGAKLVTAVACAKVPKITCVIGGSYGAGNYGMCGRAYSPRFLFMWPNARISVMGGEQAAKVLAQVVEKDKRAARGETLGVEDEANIVEPLLEKFERESSPYFSSARLWDDGVIDPADTRRVLGLSLRVATKHAAPRTSFGVFRM 720
+VIAR+VDGSRF EFK YG T+VTGF ++G VGI+ NNGVLFSES+ K HF++LCCQR IP++FLQNITGFMVGK YE GIAKDGAK+VTAVACA VPKIT +IGGSYGAGNYGMCGRAYSPRFL+MWPNARISVMGGEQAA VLA + KD++A G+ L DEA + EP++ +FE E +PY+SSARLWDDG+IDPADTR VLGLSL A +T FGVFRM
Sbjct: 66 EVIARIVDGSRFDEFKALYGDTLVTGFARIFGYPVGIIGNNGVLFSESAKKGTHFIQLCCQRNIPIVFLQNITGFMVGKEYEAGGIAKDGAKMVTAVACASVPKITVIIGGSYGAGNYGMCGRAYSPRFLYMWPNARISVMGGEQAATVLATIA-KDQKAREGKQLSEADEAALKEPIIRRFEEEGNPYYSSARLWDDGIIDPADTRLVLGLSLSAALNAPTKKTEFGVFRM 296 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig66019.14191.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig66019.14191.1 >prot_H-elongata_contig66019.14191.1 ID=prot_H-elongata_contig66019.14191.1|Name=mRNA_H-elongata_contig66019.14191.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=241bp MFCRGRTSQVIARLVDGSRFHEFKERYGTTIVTGFGHLYGQSVGIVANNGback to top mRNA from alignment at H-elongata_contig66019:1546..3262- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig66019.14191.1 ID=mRNA_H-elongata_contig66019.14191.1|Name=mRNA_H-elongata_contig66019.14191.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1717bp|location=Sequence derived from alignment at H-elongata_contig66019:1546..3262- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig66019:1546..3262- >mRNA_H-elongata_contig66019.14191.1 ID=mRNA_H-elongata_contig66019.14191.1|Name=mRNA_H-elongata_contig66019.14191.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1446bp|location=Sequence derived from alignment at H-elongata_contig66019:1546..3262- (Himanthalia elongata Himel1 dioecious)back to top |