prot_H-elongata_contig66007.14189.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig66007.14189.1
Unique Nameprot_H-elongata_contig66007.14189.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length77
Homology
BLAST of mRNA_H-elongata_contig66007.14189.1 vs. uniprot
Match: A0A1X7U173_AMPQE (tRNA (cytosine(34)-C(5))-methyltransferase n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7U173_AMPQE)

HSP 1 Score: 87.4 bits (215), Expect = 2.230e-18
Identity = 40/75 (53.33%), Postives = 52/75 (69.33%), Query Frame = 0
Query:    6 VWK---KKESWISRWKETGSSLGRPILPSFFPPSAVEAEVFKLERCVRVLPQDQDTGGFFVAVFSKTGPIIWQVQ 77
             WK   K   WIS +KET S+L   +  S FPP+A+EA+ ++L RC+R+ P  QDTGGFFVA+ SKT P+ WQVQ
Sbjct:  362 TWKVLTKNGEWISSYKETPSNLLHTVHSSMFPPTALEADTYQLNRCIRIFPHQQDTGGFFVALLSKTSPLPWQVQ 436          
BLAST of mRNA_H-elongata_contig66007.14189.1 vs. uniprot
Match: D8LLJ3_ECTSI (SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLJ3_ECTSI)

HSP 1 Score: 81.3 bits (199), Expect = 3.270e-16
Identity = 35/57 (61.40%), Postives = 45/57 (78.95%), Query Frame = 0
Query:   19 ETGSSLGRPILPSFFPPSAVEAEVFKLERCVRVLPQDQDTGGFFVAVFSKTGPIIWQ 75
            E  ++  R ++PSFFPP   +A+  +LERC+R+LPQDQDTGGFFVAV  KTGPI+WQ
Sbjct:  332 EVDTATTRKMIPSFFPPDEDKAKALRLERCMRMLPQDQDTGGFFVAVMVKTGPILWQ 388          
BLAST of mRNA_H-elongata_contig66007.14189.1 vs. uniprot
Match: A0A6H5LDC1_9PHAE (SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDC1_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 8.390e-16
Identity = 34/57 (59.65%), Postives = 45/57 (78.95%), Query Frame = 0
Query:   19 ETGSSLGRPILPSFFPPSAVEAEVFKLERCVRVLPQDQDTGGFFVAVFSKTGPIIWQ 75
            E  ++  R ++PSFFPP   +A+  +LERC+R+LPQDQDTGGFFV+V  KTGPI+WQ
Sbjct:  497 EVDTATTRKMIPSFFPPDEDKAKALRLERCMRMLPQDQDTGGFFVSVMVKTGPILWQ 553          
BLAST of mRNA_H-elongata_contig66007.14189.1 vs. uniprot
Match: A0A2T7NHK6_POMCA (tRNA (cytosine(34)-C(5))-methyltransferase n=2 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NHK6_POMCA)

HSP 1 Score: 72.0 bits (175), Expect = 5.830e-13
Identity = 34/66 (51.52%), Postives = 41/66 (62.12%), Query Frame = 0
Query:    9 KKESWISRWKETGSSLGRPILPSFFPPSAVEAEVFKLERCVRVLPQDQDTGGFFVAVFSKTGPIIW 74
            KK  WI   ++    +   I  S FPP+A EAE FKL RC+RVLP  QDTGGFF+AV  K  P+ W
Sbjct:  382 KKGEWIHSIEDVPLHMKSQITKSMFPPTAEEAERFKLHRCIRVLPHQQDTGGFFIAVLQKIQPLPW 447          
BLAST of mRNA_H-elongata_contig66007.14189.1 vs. uniprot
Match: UPI0005CF3494 (LOW QUALITY PROTEIN: tRNA (cytosine(34)-C(5))-methyltransferase n=1 Tax=Ceratosolen solmsi marchali TaxID=326594 RepID=UPI0005CF3494)

HSP 1 Score: 69.7 bits (169), Expect = 3.770e-12
Identity = 31/63 (49.21%), Postives = 39/63 (61.90%), Query Frame = 0
Query:   13 WISRWKETGSSLGRPILPSFFPPSAVEAEVFKLERCVRVLPQDQDTGGFFVAVFSKTGPIIWQ 75
            + + W++    L   I P  FPP   EAE F LERC+R+LP  QDTGGFFVAV  K  P+ W+
Sbjct:  376 YFTSWEKVPEQLQTQIRPKMFPPKPEEAEHFHLERCMRILPHHQDTGGFFVAVLVKLKPLPWE 438          
BLAST of mRNA_H-elongata_contig66007.14189.1 vs. uniprot
Match: V4ABW0_LOTGI (tRNA (cytosine(34)-C(5))-methyltransferase n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4ABW0_LOTGI)

HSP 1 Score: 69.3 bits (168), Expect = 5.130e-12
Identity = 33/73 (45.21%), Postives = 45/73 (61.64%), Query Frame = 0
Query:    5 VVWK---KKESWISRWKETGSSLGRPILPSFFPPSAVEAEVFKLERCVRVLPQDQDTGGFFVAVFSKTGPIIW 74
              WK   K+ +W  ++ +    L   I  S FPP+  EAEV +LE+CVR+LP  Q+TGGFF+AVF KT  + W
Sbjct:  340 TTWKVMSKEGTWYDKFDDLPQLLTNQIRHSMFPPTPEEAEVMQLEKCVRILPHHQNTGGFFIAVFQKTKTLPW 412          
BLAST of mRNA_H-elongata_contig66007.14189.1 vs. uniprot
Match: A0A6P3XKD6_DINQU (tRNA (cytosine(34)-C(5))-methyltransferase n=2 Tax=Dinoponera quadriceps TaxID=609295 RepID=A0A6P3XKD6_DINQU)

HSP 1 Score: 69.3 bits (168), Expect = 5.170e-12
Identity = 31/63 (49.21%), Postives = 38/63 (60.32%), Query Frame = 0
Query:   13 WISRWKETGSSLGRPILPSFFPPSAVEAEVFKLERCVRVLPQDQDTGGFFVAVFSKTGPIIWQ 75
            + + W+E        I P  FPP A EA  F LERC+R+LP  QDTGGFFVAV  K  P+ W+
Sbjct:  378 YYNAWEEVPEQWQTQIRPKMFPPPADEASKFHLERCMRILPHHQDTGGFFVAVLEKVKPLPWE 440          
BLAST of mRNA_H-elongata_contig66007.14189.1 vs. uniprot
Match: B3RJG2_TRIAD (tRNA (cytosine(34)-C(5))-methyltransferase n=2 Tax=Trichoplax TaxID=10227 RepID=B3RJG2_TRIAD)

HSP 1 Score: 68.6 bits (166), Expect = 9.620e-12
Identity = 33/72 (45.83%), Postives = 44/72 (61.11%), Query Frame = 0
Query:    6 VWK---KKESWISRWKETGSSLGRPILPSFFPPSAVEAEVFKLERCVRVLPQDQDTGGFFVAVFSKTGPIIW 74
             WK   K+ +W + + +   S    I PS FPPS  EA+   L+RC+R+LPQDQ+TGGFFVAV  K   + W
Sbjct:  349 TWKVLSKQGNWYNNFSDVPVSDSAMIKPSMFPPSESEAQEMHLDRCLRILPQDQNTGGFFVAVLQKVDHLTW 420          
BLAST of mRNA_H-elongata_contig66007.14189.1 vs. uniprot
Match: A0A8E0SA22_9TREM (tRNA (cytosine(34)-C(5))-methyltransferase n=1 Tax=Fasciolopsis buski TaxID=27845 RepID=A0A8E0SA22_9TREM)

HSP 1 Score: 68.6 bits (166), Expect = 9.640e-12
Identity = 34/72 (47.22%), Postives = 44/72 (61.11%), Query Frame = 0
Query:    6 VWKKKESWISRWKETGSSLGRPILPSFFPPSAVEAEVFKLERCVRVLPQDQDTGGFFVAVFSKTGPIIWQVQ 77
            V  +K +W  R+++  +SL   I PS FPP  V      LERC+RVLP DQ+TGGFF+AV  K  P+ W  Q
Sbjct:  382 VMTRKGAWFERFEDVPASLHSNIRPSMFPPPNVSE--LHLERCMRVLPHDQNTGGFFIAVLEKIAPLPWLKQ 451          
BLAST of mRNA_H-elongata_contig66007.14189.1 vs. uniprot
Match: A0A6L5DHL3_9INSE (tRNA (cytosine(34)-C(5))-methyltransferase n=1 Tax=Ephemera danica TaxID=1049336 RepID=A0A6L5DHL3_9INSE)

HSP 1 Score: 68.2 bits (165), Expect = 1.320e-11
Identity = 31/62 (50.00%), Postives = 41/62 (66.13%), Query Frame = 0
Query:   14 ISRWKETGSSLGRPILPSFFPPSAVEAEVFKLERCVRVLPQDQDTGGFFVAVFSKTGPIIWQ 75
             + ++E   +L   I P  FPP+  +A  F L+RCVR+LP  QDTGGFFVAVF K GP+ W+
Sbjct:  364 FNSFEEVPENLHTQIRPHLFPPTPDKAAEFHLKRCVRILPHMQDTGGFFVAVFEKHGPLPWE 425          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig66007.14189.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1X7U173_AMPQE2.230e-1853.33tRNA (cytosine(34)-C(5))-methyltransferase n=1 Tax... [more]
D8LLJ3_ECTSI3.270e-1661.40SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=... [more]
A0A6H5LDC1_9PHAE8.390e-1659.65SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=... [more]
A0A2T7NHK6_POMCA5.830e-1351.52tRNA (cytosine(34)-C(5))-methyltransferase n=2 Tax... [more]
UPI0005CF34943.770e-1249.21LOW QUALITY PROTEIN: tRNA (cytosine(34)-C(5))-meth... [more]
V4ABW0_LOTGI5.130e-1245.21tRNA (cytosine(34)-C(5))-methyltransferase n=1 Tax... [more]
A0A6P3XKD6_DINQU5.170e-1249.21tRNA (cytosine(34)-C(5))-methyltransferase n=2 Tax... [more]
B3RJG2_TRIAD9.620e-1245.83tRNA (cytosine(34)-C(5))-methyltransferase n=2 Tax... [more]
A0A8E0SA22_9TREM9.640e-1247.22tRNA (cytosine(34)-C(5))-methyltransferase n=1 Tax... [more]
A0A6L5DHL3_9INSE1.320e-1150.00tRNA (cytosine(34)-C(5))-methyltransferase n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.150coord: 4..76
e-value: 1.2E-7
score: 33.1
NoneNo IPR availablePANTHERPTHR22808NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAININGcoord: 7..74
NoneNo IPR availablePANTHERPTHR22808:SF1TRNA (CYTOSINE(34)-C(5))-METHYLTRANSFERASEcoord: 7..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig66007contigH-elongata_contig66007:451..1330 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig66007.14189.1mRNA_H-elongata_contig66007.14189.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig66007 442..1330 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig66007.14189.1 ID=prot_H-elongata_contig66007.14189.1|Name=mRNA_H-elongata_contig66007.14189.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=77bp
MGMKVVWKKKESWISRWKETGSSLGRPILPSFFPPSAVEAEVFKLERCVR
VLPQDQDTGGFFVAVFSKTGPIIWQVQ
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