prot_H-elongata_contig11837.1418.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11837.1418.1
Unique Nameprot_H-elongata_contig11837.1418.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length181
Homology
BLAST of mRNA_H-elongata_contig11837.1418.1 vs. uniprot
Match: D7G4K1_ECTSI (Myb-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4K1_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 9.480e-17
Identity = 48/83 (57.83%), Postives = 52/83 (62.65%), Query Frame = 0
Query:    7 GRWDKAEHESFLRGLERHGKDWQLIADLFVISRTATQIRTHAQKYEKKVERGMSFPEKPYTA-------CDIRAGGRNAPRPC 82
            GRW K EH  FL GLE  GKDW  I+  FV SRTATQIRTHAQKY  KV RG SFPE+PY +       CD R+G     R C
Sbjct:   57 GRWTKKEHADFLVGLEACGKDWMEISCHFVFSRTATQIRTHAQKYFTKVNRGQSFPEQPYESVPGKRNTCDDRSGSPGDERHC 139          
BLAST of mRNA_H-elongata_contig11837.1418.1 vs. uniprot
Match: A0A6H5JC35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC35_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 5.160e-14
Identity = 38/67 (56.72%), Postives = 51/67 (76.12%), Query Frame = 0
Query:    7 GRWDKAEHESFLRGLERHGKDWQLIADLFVISRTATQIRTHAQKYEKKVERGMSFPEKPYTACDIRA 73
            GRW K EH++FL+GL  HGK+W LIA + V +R+A Q+RTH QKY KKV++G  FPE+PY +  I+A
Sbjct:    8 GRWTKEEHDAFLQGLVLHGKNWDLIAPI-VKTRSAVQVRTHGQKYFKKVDKGERFPEEPYESMFIKA 73          
BLAST of mRNA_H-elongata_contig11837.1418.1 vs. uniprot
Match: D8LPL1_ECTSI (HTH myb-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPL1_ECTSI)

HSP 1 Score: 64.3 bits (155), Expect = 8.950e-10
Identity = 34/77 (44.16%), Postives = 50/77 (64.94%), Query Frame = 0
Query:    1 RLKKRRGRWDKAEHESFLRGLERHGKDWQLIADLFVISRTATQIRTHAQKYEKKVERGMSFPEKPYTACDIRAGGRN 77
            R++K +G+W + EHE+FL GL +H  +    +   V +R+A QIRTHAQKY  K+ERG  FP +PY +    A G++
Sbjct:    3 RIRKNKGKWTREEHEAFLSGLWQHESN----SHALVPTRSALQIRTHAQKYFDKIERGEKFPAQPYPSQYDAASGKS 75          
BLAST of mRNA_H-elongata_contig11837.1418.1 vs. uniprot
Match: A0A1Z5JEK9_FISSO (MYB-related transcription factor LHY n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JEK9_FISSO)

HSP 1 Score: 64.7 bits (156), Expect = 4.650e-9
Identity = 29/51 (56.86%), Postives = 41/51 (80.39%), Query Frame = 0
Query:    7 GRWDKAEHESFLRGLERHGKDWQLIADLFVISRTATQIRTHAQKYEKKVER 57
            GRW + EH+ FL GLE+HGK W+LIA++ + +RT  Q+RTHAQKY +++ER
Sbjct:   79 GRWTEQEHQVFLEGLEKHGKQWKLIANM-IGTRTVVQVRTHAQKYFQRMER 128          
BLAST of mRNA_H-elongata_contig11837.1418.1 vs. uniprot
Match: A0A6H5L149_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L149_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 8.390e-9
Identity = 34/78 (43.59%), Postives = 52/78 (66.67%), Query Frame = 0
Query:    2 LKKRRGRWDKAEHESFLRGLERHGKD-WQLIADLFVISRTATQIRTHAQKYEKKVERGMSFPEKPYTACDIRAGGRNA 78
            +++ +GRW   EH++FLRG+ R  ++ W  IA L   +RT  QIRTHAQKY  KV++G  FP++PY +    A G+++
Sbjct:    3 IRRNKGRWTSEEHDAFLRGVRRFKRNNWVGIATLLP-TRTVLQIRTHAQKYYAKVDKGEPFPDEPYPSQHEAAAGKSS 79          
BLAST of mRNA_H-elongata_contig11837.1418.1 vs. uniprot
Match: D7FXJ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXJ4_ECTSI)

HSP 1 Score: 58.2 bits (139), Expect = 2.750e-8
Identity = 31/64 (48.44%), Postives = 43/64 (67.19%), Query Frame = 0
Query:    1 RLKKRRGRWDKAEHESFLRGLERHGKD-WQLIADLFVISRTATQIRTHAQKYEKKVERGMSFPE 63
            R+++ +GRW   EH +FLRG+ R  ++ W  IA L   +RT  QIRTHAQKY  KV++G  FP+
Sbjct:    7 RIRRNKGRWTSEEHHAFLRGVRRFKRNNWVGIATLLP-TRTVLQIRTHAQKYYAKVDKGEPFPD 69          
BLAST of mRNA_H-elongata_contig11837.1418.1 vs. uniprot
Match: B7G1J8_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G1J8_PHATC)

HSP 1 Score: 60.8 bits (146), Expect = 1.050e-7
Identity = 29/51 (56.86%), Postives = 38/51 (74.51%), Query Frame = 0
Query:    7 GRWDKAEHESFLRGLERHGKDWQLIADLFVISRTATQIRTHAQKYEKKVER 57
            GRW   EH+ FL GL +HGK W+LIA + + SRT  Q+RTHAQKY +K++R
Sbjct:   92 GRWLDEEHQVFLEGLAKHGKQWKLIATM-IGSRTVVQVRTHAQKYFQKMDR 141          
BLAST of mRNA_H-elongata_contig11837.1418.1 vs. uniprot
Match: A0A7S3LKU2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LKU2_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 1.060e-7
Identity = 27/49 (55.10%), Postives = 39/49 (79.59%), Query Frame = 0
Query:    7 GRWDKAEHESFLRGLERHGKDWQLIADLFVISRTATQIRTHAQKYEKKV 55
            GRW KAEH+ F++GL+ +GK+W+ IA + + +RT  QIRTHAQKY +K+
Sbjct:   90 GRWTKAEHDRFVKGLDVYGKEWKKIAAM-IETRTIVQIRTHAQKYFQKI 137          
BLAST of mRNA_H-elongata_contig11837.1418.1 vs. uniprot
Match: D7FXQ4_ECTSI (HTH myb-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXQ4_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 1.440e-7
Identity = 33/76 (43.42%), Postives = 48/76 (63.16%), Query Frame = 0
Query:    2 LKKRRGRWDKAEHESFLRGLERHGK-DWQLIADLFVISRTATQIRTHAQKYEKKVERGMSFPEKPYTACDIRAGGR 76
            +++ +GRW   EH  FLRG+E   + D + +A +   +RT  Q+RTHAQKY  KV++G  FP +PY +   RA GR
Sbjct:    3 IRRNKGRWTHEEHAEFLRGVELFKRSDLEAVASMLP-TRTILQVRTHAQKYFDKVDKGEPFPNEPYPSQYDRAAGR 77          
BLAST of mRNA_H-elongata_contig11837.1418.1 vs. uniprot
Match: A0A7N0UGV5_KALFE (Uncharacterized protein n=3 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0UGV5_KALFE)

HSP 1 Score: 60.5 bits (145), Expect = 1.870e-7
Identity = 41/115 (35.65%), Postives = 65/115 (56.52%), Query Frame = 0
Query:    2 LKKRRGRWDKAEHESFLRGLERHGKDWQLIADLFVISRTATQIRTHAQKYEKKVERGMSFPEKPYTACDIRAGGRNAPRPCRRPKTPQPSSPLPEVIDIVIPTSPCFSSNGPISL 116
            + K+R RW + EH  FL  L+ +G+ WQ I +  + ++TA QIR+HAQK+  K+E+  S   K     ++R      PRP ++P     ++P P  I +V PT P  + +G IS+
Sbjct:   20 ISKQRERWTEEEHGRFLEALKLYGRAWQRIEE-HIGTKTAVQIRSHAQKFFLKLEKDASG--KGVLISEVRDIDIPPPRPKKKP-----NNPYPRKISVVAPTVPAEAKDGKISI 126          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11837.1418.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4K1_ECTSI9.480e-1757.83Myb-like domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JC35_9PHAE5.160e-1456.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LPL1_ECTSI8.950e-1044.16HTH myb-type domain-containing protein n=1 Tax=Ect... [more]
A0A1Z5JEK9_FISSO4.650e-956.86MYB-related transcription factor LHY n=2 Tax=Fistu... [more]
A0A6H5L149_9PHAE8.390e-943.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXJ4_ECTSI2.750e-848.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
B7G1J8_PHATC1.050e-756.86Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S3LKU2_9STRA1.060e-755.10Hypothetical protein (Fragment) n=1 Tax=Aplanochyt... [more]
D7FXQ4_ECTSI1.440e-743.42HTH myb-type domain-containing protein n=1 Tax=Ect... [more]
A0A7N0UGV5_KALFE1.870e-735.65Uncharacterized protein n=3 Tax=Kalanchoe fedtsche... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 5..54
e-value: 1.1E-10
score: 51.4
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 6..51
e-value: 3.0E-11
score: 43.3
NoneNo IPR availableGENE3D1.10.10.60coord: 8..56
e-value: 1.6E-14
score: 55.6
NoneNo IPR availablePANTHERPTHR12802SWI/SNF COMPLEX-RELATEDcoord: 3..150
NoneNo IPR availablePANTHERPTHR12802:SF20MPN DOMAIN-CONTAINING PROTEIN CG4751coord: 3..150
IPR006447Myb domain, plantsTIGRFAMTIGR01557TIGR01557coord: 4..54
e-value: 1.3E-11
score: 42.6
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 1..56
score: 17.912
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 2..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11837contigH-elongata_contig11837:4348..7900 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11837.1418.1mRNA_H-elongata_contig11837.1418.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11837 2894..7900 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11837.1418.1 ID=prot_H-elongata_contig11837.1418.1|Name=mRNA_H-elongata_contig11837.1418.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=181bp
RLKKRRGRWDKAEHESFLRGLERHGKDWQLIADLFVISRTATQIRTHAQK
YEKKVERGMSFPEKPYTACDIRAGGRNAPRPCRRPKTPQPSSPLPEVIDI
VIPTSPCFSSNGPISLEEEYHTAPPSSHDSEAYGLSASSSEAQTGSPSNS
FLTSTPASGRFTPRTPWMTATRRDARLSAE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR006447Myb_dom_plants
IPR017930Myb_dom
IPR009057Homeobox-like_sf