mRNA_H-elongata_contig65891.14172.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig65891.14172.1 vs. uniprot
Match: D8LBE0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBE0_ECTSI) HSP 1 Score: 449 bits (1155), Expect = 2.460e-152 Identity = 269/407 (66.09%), Postives = 307/407 (75.43%), Query Frame = 1
Query: 4 GSVAASQVKVSSKYQHRPTAPPSSNLPSKANPATATXXXXXXXXXXXXXXXXXXXXXXXXDDNHDVGKERSEQEDDGKHQAQGLATPATVETSPRDEDLQHGPVRNLSAIIDMLTKSDLPEVVKEQSIQVFTALGVAEAKTHGSTLDQVHFHEVGAIDSIIDTVGVVYALHLLGVEKVCCSALPFSEGTVWTDHGILPVPAPATLRLMTGLPTCPGPKSATGELVTPTGAALVRVIASEFGRPPPFVPRSIGIGAGTKDFDKHPNILRVILGDVPAPPEALEPAPMEELMTPAAQG--EIPDWVSRRLWVLEANIDDMTGEAVGYLTDKLLEEGSLDAWVSPIVMKKSRPAFTVHVLCEEKTKERLMRLLFIESTTIGIRTRSVERCALRRDTITPTTKFGRVRVKV 1218
GS+AA+ V V+SKYQHRP APP XXXXXXXXXXXXXXXXXXXXXX + RSE + TPAT + E ++ GPVR+L+ I M+ +S LP VKE+S++VFT LG AEAKTHGSTLDQVHFHEVGAIDSIIDTVGVVYALHLLG+EKV CSALP SEGTVWT HGILPVPAPATLRLM GLPTCPGPKSA GELVTP+GAALVRV++SEFGRP F P +IGIGAGTKDFDKHPNILRVILG+VP P + EP P+E++ A G E W +R+L VLEANIDDMTGEA GYL + LLE G LDAW+ PI+MKK RPAFTV VLCE+ +ER +RLLF ES+T+G+R RSVERCALRR T+ +T FG VRVKV
Sbjct: 57 GSIAAAHVNVTSKYQHRPAAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQ------AQHRSE-----------VVTPATTSPADATEGIEDGPVRDLTTIRKMIMESGLPPAVKERSVRVFTELGEAEAKTHGSTLDQVHFHEVGAIDSIIDTVGVVYALHLLGIEKVYCSALPLSEGTVWTAHGILPVPAPATLRLMVGLPTCPGPKSAKGELVTPSGAALVRVLSSEFGRPSLFTPGAIGIGAGTKDFDKHPNILRVILGEVPPPLPSEEPQPVEQIRASPADGARETGSWTTRQLSVLEANIDDMTGEAAGYLMEVLLEAGCLDAWLCPILMKKGRPAFTVSVLCEQHDQERFVRLLFTESSTLGVRRRSVERCALRRKTVPVSTTFGDVRVKV 446
BLAST of mRNA_H-elongata_contig65891.14172.1 vs. uniprot
Match: A0A024USA0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024USA0_9STRA) HSP 1 Score: 284 bits (726), Expect = 1.090e-87 Identity = 151/311 (48.55%), Postives = 208/311 (66.88%), Query Frame = 1
Query: 295 DLQHGPVRNLSAIIDMLTKSDLPEVVKEQSIQVFTALGVAEAKTHGSTLDQVHFHEVGAIDSIIDTVGVVYALHLLGVEKVCCSALPFSEGTVWTDHGILPVPAPATLRLMTGLPTCPGPKSATGELVTPTGAALVRVIASEFGRPPPFVPRSIGIGAGTKDFDKHPNILRVILGDVPAPPEALEPAPMEELMTPAAQGEIPDWVSRRLWVLEANIDDMTGEAVGYLTDKLLEEGSLDAWVSPIVMKKSRPAFTVHVLCEEKTKERLMRLLFIESTTIGIRTRSVERCALRRDTITPTTKFGRVRVKVRHV 1227
D +H R ++A+ID S++ VKE S +VF LG AEA HG+T+D+VHFHEVGAIDS+IDT+G V AL LL +++V CS LPFS+G V HG++PVPAPATLRL G+P P PK A GELVTPTGA+L++ +A FG+PPPFVP ++G GAGTKDF H NI+RV++G P + A + +P G D + VLE N+DDM + G++ ++LL++G+LD WV PI MKK+RPA + VLC L +LF E+TT+GIR +++ER LRR+ I +++G VK+ ++
Sbjct: 143 DHEHRNYRTIAAMIDA---SEMSPWVKENSKRVFHCLGEAEASVHGTTMDKVHFHEVGAIDSLIDTIGSVLALELLHIDEVHCSFLPFSKGFVRCTHGVMPVPAPATLRLFHGIPMGPAPKGAVGELVTPTGASLMKALARTFGQPPPFVPIALGSGAGTKDFPNHANIVRVVIGTAVDPSTTVVNANWTPVPSPELIGTS-DTTIEHVSVLETNVDDMNPQVFGHVQERLLQKGALDVWVQPIQMKKNRPATLMSVLCHHHQVGDLSTILFEETTTLGIRRQTMERITLRRERIDVASQYGTASVKIAYL 449
BLAST of mRNA_H-elongata_contig65891.14172.1 vs. uniprot
Match: A0A835ZDR8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDR8_9STRA) HSP 1 Score: 286 bits (733), Expect = 1.390e-87 Identity = 173/387 (44.70%), Postives = 214/387 (55.30%), Query Frame = 1
Query: 313 VRNLSAIIDMLTKSDLPEVVKEQSIQVFTALGVA--------------EAKTHGSTLDQVHFHEVGAIDSIIDTVGVVYALHLLGVEKVCCSALPFSEGTVWTDHGILPVPAPATLRLMTGLPTCPGPKSATGELVTPTGAALVRVIASEF-----GRPPPFVPRSIGIGAGTKDFDKHPNILRVILGDVPAPPEALEPAPMEELM----------------TPAAQGEIPD------WVSRRLWVLEANIDDMTGEAVGYLTDKLLEEGSLDAWVSPI--------------------------------------------VMKKSRPAFTVHVLCEEKTKERLMRLLFIESTTIGIRTRSVERCALRRDTITPTTKFGRVRVKV 1218
+RN +AI +L S LP V SI F L VA EA THG+T+D+VHFHEVGAIDSI+DT CS LPFS GTVWT HGILPVPAPATLRLM G+PTCPGP+SA+GELVTPTGA L+RV+ + F GRPPPF P ++G+GAGTK+FD HPN+LRV+LGD PA A P LM TPAA+ D W +L VLEANIDD TGE + +L + + G+LD+W +PI VMKK RPA T+H+LC+E RL L+F+E T+GIR+ +VER AL R+ ++ T++G VRVKV
Sbjct: 163 LRNFAAIAGLLRDSGLPPAVISTSIAAFHELAVAARSSHCVWWRSDAAEAHTHGTTVDEVHFHEVGAIDSIVDT--------------CYCSPLPFSGGTVWTAHGILPVPAPATLRLMMGMPTCPGPRSASGELVTPTGACLIRVLCAPFDGGASGRPPPFTPSAVGVGAGTKEFDGHPNVLRVVLGDAPAAAPATPLPPAAALMESAAHAHVVRGVAEDVTPAAETAATDAMGDFGWNESQLTVLEANIDDATGEELAHLISECMAAGALDSWCTPIAACDQSGCYDTTPPHPNTHAHRMPASGRRRLNVPSVLSHGHAHAVMKKGRPAHTLHLLCQEPGHRRLAALVFLEGATLGIRSHAVERFALPREQVSVATRYGSVRVKV 535
BLAST of mRNA_H-elongata_contig65891.14172.1 vs. uniprot
Match: A0A7C5UHF8_9BACT (Putative nickel insertion protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A7C5UHF8_9BACT) HSP 1 Score: 276 bits (705), Expect = 6.950e-86 Identity = 153/306 (50.00%), Postives = 201/306 (65.69%), Query Frame = 1
Query: 301 QHGPVRNLSAIIDMLTKSDLPEVVKEQSIQVFTALGVAEAKTHGSTLDQVHFHEVGAIDSIIDTVGVVYALHLLGVEKVCCSALPFSEGTVWTDHGILPVPAPATLRLMTGLPTCPGPKSATGELVTPTGAALVRVIASEFGRPPPFVPRSIGIGAGTKDFDKHPNILRVILGDVPAPPEALEPAPMEELMTPAAQGEIPDWVSRRLWVLEANIDDMTGEAVGYLTDKLLEEGSLDAWVSPIVMKKSRPAFTVHVLCEEKTKERLMRLLFIESTTIGIRTRSVERCALRRDTITPTTKFGRVRVKV 1218
+H P R + I ++ S LPEVVK QS+ +F L AEAK HG ++D+VHFHE+GA+DSI+D VGVVYALHLLGV++V SALPFS G V T HG LPVPAPAT+ L+ G+PT P A EL+TPTGAAL++ +A FG PP F P+ IG GAG KD PN+LRVI+G++ ALE RL V+E N+DDMTGE VG++ ++L E G+ D WV+P MKKSRPA + VLC+ + +M++L E+TT+G+R + VER L+R+ + T +G VRVKV
Sbjct: 66 KHHPERRVEDIEGIILSSALPEVVKFQSLNIFRLLAEAEAKVHGISVDEVHFHEIGAVDSIVDIVGVVYALHLLGVKEVHTSALPFSRGRVKTAHGELPVPAPATMELLCGIPTYPLEVDA--ELITPTGAALLKGLAKSFGAPPLFTPQKIGYGAGKKDLP-FPNVLRVIIGEMTGD-IALE--------------------RERLTVVETNLDDMTGELVGFVMERLFEAGAKDVWVTPAQMKKSRPAVVLSVLCDSSSLTNVMQILLRETTTLGVRVQEVERLCLQREFVEVETPYGIVRVKV 347
BLAST of mRNA_H-elongata_contig65891.14172.1 vs. uniprot
Match: A0A6G0XFA5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XFA5_9STRA) HSP 1 Score: 280 bits (715), Expect = 9.600e-86 Identity = 147/301 (48.84%), Postives = 196/301 (65.12%), Query Frame = 1
Query: 316 RNLSAIIDMLTKSDLPEVVKEQSIQVFTALGVAEAKTHGSTLDQVHFHEVGAIDSIIDTVGVVYALHLLGVEKVCCSALPFSEGTVWTDHGILPVPAPATLRLMTGLPTCPGPKSATGELVTPTGAALVRVIASEFGRPPPFVPRSIGIGAGTKDFDKHPNILRVILGDVPAPPEALEPAPMEELMTPAAQGEIPDWVSRRLWVLEANIDDMTGEAVGYLTDKLLEEGSLDAWVSPIVMKKSRPAFTVHVLCEEKTKERLMRLLFIESTTIGIRTRSVERCALRRDTITPTTKFGRVRVKV 1218
RNL I +M+ S L VKE S +VF L AEA HG+T+D++HFHEVGAIDSIIDT+G V AL LL VE+V CS LPFS+ V HG++PVPAPATLRL G+P P P A GELVTPTGA+L++ +A FG+PPPF+P + G GAGTKDF H NI+RV++GD P ++ A ++ Q D + VLE N+DDM + G++ D L + G+LD W+ PI MKK+RPA + VLC + + L ++LF E+TT+GIR +++ R LRR+ I T +G K+
Sbjct: 175 RNLKTIENMIDSSKLSPWVKENSKRVFYCLAEAEASVHGTTIDKIHFHEVGAIDSIIDTIGSVVALELLQVEEVHCSFLPFSKNFVKCMHGVMPVPAPATLRLFMGIPVAPAPNGAVGELVTPTGASLMKALAKTFGQPPPFLPTASGSGAGTKDFPNHANIVRVVIGDAIEPSASVPNASWRPMLPRERQL---DASGENVIVLETNLDDMNPQVFGHVQDLLFQRGALDVWLQPIQMKKNRPATLLSVLCHHQKVDELSQILFDETTTLGIRRQTMNRLVLRREKINVATPYGIASAKI 472
BLAST of mRNA_H-elongata_contig65891.14172.1 vs. uniprot
Match: W7UBQ3_9STRA (Uncharacterized protein family UPF0272 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UBQ3_9STRA) HSP 1 Score: 281 bits (719), Expect = 1.460e-85 Identity = 166/366 (45.36%), Postives = 215/366 (58.74%), Query Frame = 1
Query: 316 RNLSAIIDMLTKSD-LPEVVKEQSIQVFTALGVAEAKTHGSTLDQVHFHEVGAIDSIIDTVGVVYALHLLGVEKVCCSALPFSEG-TVWTDHGILPVPAPATLRLMTGLPTCPGPKSATGELVTPTGAALVRVIAS-EFGRPPPFVPRSIGIGAGTKDFDKHPNILRVILGDVPA------------------------------------------PP--------EALEPA--------PMEELMTPAAQGEI---PDWVSRRLWVLEANIDDMTGEAVGYLTDKLLEE-GSLDAWVSPIVMKKSRPAFTVHVLCEEKTKERLMRLLFIESTTIGIRTRSVERCALRRDTITPTTKFGRVRVKV 1218
RNL I +M+ +D LP V++QS+ VFTAL AEA THG +D++HFHEVGA+DSIIDTVG VYALHLLGV++V SALP+ EG T T HGILPVP PATLRLM G+P PGP+ A GELVTPTGA+LV+V+A+ G+PP FVP +G+GAG+KDF H N++RV++GD P PP E ++P P E+L PA W R L LEAN+DDMT E + ++LL + G D W +P VMKK RP T+H+LCE L+R +F+E+ T+G+R +V R AL RD + T++G+VR KV
Sbjct: 121 RNLEIIREMIMNADGLPVSVRQQSVAVFTALAEAEAATHGVAVDKIHFHEVGAVDSIIDTVGTVYALHLLGVQEVHASALPYGEGFTGETAHGILPVPTPATLRLMLGMPMLPGPRGAAGELVTPTGASLVKVLAAGRMGQPPVFVPDLLGVGAGSKDFPGHANVVRVLVGDRPLSSEEGGTGDLGVVRASRPVWEAGNGGEDGVLAHAQRLRPSFHPPAGYLSEKGEPVQPMTVPSPLHPPTEQLPIPAPPASAWSSGGWEERHLCELEANLDDMTPETASFALERLLAQPGCADVWYTPAVMKKGRPGLTLHLLCEPSAAPALLRCIFLETPTLGVRAHTVARLALERDFVLVPTRYGQVRAKV 486
BLAST of mRNA_H-elongata_contig65891.14172.1 vs. uniprot
Match: K8YZF7_NANGC (Rrna methyltransferase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YZF7_NANGC) HSP 1 Score: 285 bits (730), Expect = 3.250e-85 Identity = 167/370 (45.14%), Postives = 218/370 (58.92%), Query Frame = 1
Query: 316 RNLSAIIDMLTKSD-LPEVVKEQSIQVFTALGVAEAKTHGSTLDQVHFHEVGAIDSIIDTVGVVYALHLLGVEKVCCSALPFSEG-TVWTDHGILPVPAPATLRLMTGLPTCPGPKSATGELVTPTGAALVRVIAS-EFGRPPPFVPRSIGIGAGTKDFDKHPNILRVILGDVPA------------------------------------------PP--------EALEPA--------PMEELMTPAAQGEI---PDWVSRRLWVLEANIDDMTGEAVGYLTDKLLEE-GSLDAWVSPIVMKKSRPAFTVHVLCEEKTKERLMRLLFIESTTIGIRTRSVERCALRRDTITPTTKFGRVRVKVRHVQ 1230
RNL I +M+ +D LP V++QS+ VFTAL AEA THG +D++HFHEVGA+DSIIDTVG VYALHLLGV++V SALP+ EG T T HGILPVP PATLRLM G+P PGP+ A GELVTPTGA+LV+V+A+ G+PP FVP +G+GAG+KDF H N++RV++GD P PP E ++P P E+L PA W R L LEAN+DDMT E + ++LL + G D W +P VMKK RP T+H+LCE L+R +F+E+ T+G+R +V R AL RD + T++G+VR K+RH +
Sbjct: 121 RNLEIIREMIMNADGLPVSVRQQSVAVFTALAEAEAATHGVAVDKIHFHEVGAVDSIIDTVGTVYALHLLGVQEVHASALPYGEGFTGETAHGILPVPTPATLRLMLGMPMLPGPRGAAGELVTPTGASLVKVLAAGRMGQPPVFVPDLLGVGAGSKDFPGHANVVRVLVGDRPLSSEEGGTGDLGVVRASRPVWEAGNGGEDGVLAHAQRLRPSFHPPAGYLSEKGEPVQPMTVPSPLHPPTEQLPIPAPSASAWSSGGWEERHLCELEANLDDMTPETASFALERLLAQPGCADVWYTPAVMKKGRPGLTLHLLCEPSAAPALLRCIFLETPTLGVRAHTVARLALERDFVLVPTRYGQVRAKLRHAK 490
BLAST of mRNA_H-elongata_contig65891.14172.1 vs. uniprot
Match: B8BQA0_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQA0_THAPS) HSP 1 Score: 271 bits (694), Expect = 2.370e-84 Identity = 152/310 (49.03%), Postives = 200/310 (64.52%), Query Frame = 1
Query: 313 VRNLSAIIDMLTKSD---LPEVVKEQSIQVFTALGVAEAKTHGS-TLDQVHFHEVGAIDSIIDTVGVVYALHLLGVEK-VCCSALPFSEGTVWTDHGILPVPAPATLRLMTGLPTCPGPKSATGELVTPTGAALVRVIA------------------SEFGRPPPFVPRSIGIGAGTKDFDKHPNILRVILGDVPAPPEALEPAPMEELMTPAAQGEIPDWVSRRLWVLEANIDDMTGEAVGYLTDKLLEEGSLDAWVSPIVMKKSRPAFTVHVLCEEKTKERLMRLLFIESTTIGIRT-RSVERCALRR 1170
+RNL I +ML + +P +V +IQ FT L AE THG+ +++ VHFHEVGA+DSI+DTVG V AL+ LGV+ + CS LP EG+VWTDHG+LPVPAPATLRLM G+PTC GPK TGELVTPT AAL+RV+ + GRPP F PR+IG+GAGTKDF++HPN+LR+ILGD + + W +L LEANIDD T E + + D LL+ G++DAW+ PIVMKK RPA ++H LC +++ RL+ +LF ++TT+GIR R + R AL+R
Sbjct: 79 LRNLPQIKEMLLSAPPTHIPPLVASLAIQSFTELAYAEMNTHGADSVESVHFHEVGAVDSIVDTVGTVLALYYLGVDLGISCSRLPLGEGSVWTDHGLLPVPAPATLRLMVGMPTCQGPKGVTGELVTPTAAALLRVLTGISSAQENNSSKSHWQPKAVIGRPPCFTPRAIGLGAGTKDFERHPNVLRLILGD----------DIQNSKSSTINERNHKLWDIHKLTHLEANIDDATPELLAHTVDLLLKNGAIDAWIHPIVMKKGRPAHSMHCLCHCESQTRLLGVLFRQTTTLGIRIQRGILRAALKR 378
BLAST of mRNA_H-elongata_contig65891.14172.1 vs. uniprot
Match: A0A2H5XC37_9BACT (Putative nickel insertion protein n=1 Tax=bacterium HR17 TaxID=2035412 RepID=A0A2H5XC37_9BACT) HSP 1 Score: 272 bits (696), Expect = 3.350e-84 Identity = 152/301 (50.50%), Postives = 197/301 (65.45%), Query Frame = 1
Query: 316 RNLSAIIDMLTKSDLPEVVKEQSIQVFTALGVAEAKTHGSTLDQVHFHEVGAIDSIIDTVGVVYALHLLGVEKVCCSALPFSEGTVWTDHGILPVPAPATLRLMTGLPTCPGPKSATGELVTPTGAALVRVIASEFGRPPPFVPRSIGIGAGTKDFDKHPNILRVILGDVPAPPEALEPAPMEELMTPAAQGEIPDWVSRRLWVLEANIDDMTGEAVGYLTDKLLEEGSLDAWVSPIVMKKSRPAFTVHVLCEEKTKERLMRLLFIESTTIGIRTRSVERCALRRDTITPTTKFGRVRVKV 1218
R+L+ I ++ S LP+ VK QS+ VF L AEAK HG ++D+VHFHEVGA+DSI+D VG VYAL+LLGV+ V SALPFS G V T HG LPVPAPATL L+ G+PT P + ELVTPTGAAL++ +A FG PPP P+ +G GAG +D PN+LRVILGD P EAL P+E RL V+E N+DDMTGE G++ ++LLE G+ D W++P MKK+RPA + VLC+ ++RLL E+TT+G+R + +ER L R+ T +G VRVKV
Sbjct: 96 RHLADIERLIAASQLPDPVKGQSLAVFRLLAEAEAKVHGISVDEVHFHEVGAVDSIVDIVGAVYALYLLGVQSVYASALPFSHGRVQTAHGELPVPAPATLELLRGVPTYP--LNVDAELVTPTGAALLKGLAKSFGTPPPLTPQRVGYGAGKRDLP-FPNVLRVILGDAP---EAL---PLER---------------ERLMVVETNLDDMTGELAGFVMERLLEAGARDVWLTPAQMKKNRPAVILSVLCDAPALPTVLRLLLTETTTLGVRVQEMERWCLPREMWEVATPYGTVRVKV 372
BLAST of mRNA_H-elongata_contig65891.14172.1 vs. uniprot
Match: A0A7C3W9V7_9BACT (Putative nickel insertion protein n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7C3W9V7_9BACT) HSP 1 Score: 271 bits (693), Expect = 5.390e-84 Identity = 154/306 (50.33%), Postives = 198/306 (64.71%), Query Frame = 1
Query: 301 QHGPVRNLSAIIDMLTKSDLPEVVKEQSIQVFTALGVAEAKTHGSTLDQVHFHEVGAIDSIIDTVGVVYALHLLGVEKVCCSALPFSEGTVWTDHGILPVPAPATLRLMTGLPTCPGPKSATGELVTPTGAALVRVIASEFGRPPPFVPRSIGIGAGTKDFDKHPNILRVILGDVPAPPEALEPAPMEELMTPAAQGEIPDWVSRRLWVLEANIDDMTGEAVGYLTDKLLEEGSLDAWVSPIVMKKSRPAFTVHVLCEEKTKERLMRLLFIESTTIGIRTRSVERCALRRDTITPTTKFGRVRVKV 1218
++ P R+LS I ++ S LPE VKEQS++VF L AEAK HG +++VHFHEVGA+DSI+D VG VYALHLLGV+ V SALPF+ G V T HG LPVPAPAT+ L+ G+PT P ELVTPTGAAL++ +A+ FG PPPF PR +G GAG +D PN+LRVILGD+P ALE RL V+E N+DDMTGE GY ++LL G D WV P MKK+RPA + VLC+ + ++++L E+TT+G+R + VER L R+ TT +G V+VKV
Sbjct: 66 ENQPERHLSDIETIIIASQLPEKVKEQSLKVFQLLAEAEAKVHGIGVNEVHFHEVGAVDSILDIVGSVYALHLLGVQAVYASALPFTRGRVKTLHGDLPVPAPATMELLCGVPTYP--LDIEVELVTPTGAALLKALANGFGMPPPFTPRKVGYGAGKRDLP-FPNVLRVILGDLPDN-VALE--------------------RERLVVVETNLDDMTGEMAGYAMERLLAAGVRDVWVVPAQMKKNRPAIVLSVLCDHEKLPTVLQILLRETTTLGVRVQEVERLCLPREIWEVTTPYGTVKVKV 347 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig65891.14172.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig65891.14172.1 >prot_H-elongata_contig65891.14172.1 ID=prot_H-elongata_contig65891.14172.1|Name=mRNA_H-elongata_contig65891.14172.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=412bp QGSVAASQVKVSSKYQHRPTAPPSSNLPSKANPATATGHAHSHNHGHAHSback to top mRNA from alignment at H-elongata_contig65891:470..2995- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig65891.14172.1 ID=mRNA_H-elongata_contig65891.14172.1|Name=mRNA_H-elongata_contig65891.14172.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2526bp|location=Sequence derived from alignment at H-elongata_contig65891:470..2995- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig65891:470..2995- >mRNA_H-elongata_contig65891.14172.1 ID=mRNA_H-elongata_contig65891.14172.1|Name=mRNA_H-elongata_contig65891.14172.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2472bp|location=Sequence derived from alignment at H-elongata_contig65891:470..2995- (Himanthalia elongata Himel1 dioecious)back to top |