prot_H-elongata_contig65783.14161.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig65783.14161.1
Unique Nameprot_H-elongata_contig65783.14161.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length71
Homology
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BLAST of mRNA_H-elongata_contig65783.14161.1 vs. uniprot
Match: A0A6H5JIK1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIK1_9PHAE)

HSP 1 Score: 48.9 bits (115), Expect = 6.120e-5
Identity = 23/54 (42.59%), Postives = 37/54 (68.52%), Query Frame = 0 
Query:    2 LDKALYEACAEEFERVIAPQTDQVQSDLVEFYKLQRQMGEYMNTNPTSMANKLY 55
            LD+ LYEA  +EFE+ +AP    VQ D+ +F +LQ  + +Y+N N +S+A ++Y
Sbjct:  280 LDRVLYEAGKDEFEKRLAPYASSVQEDIPQFQELQGVIKDYLNGNSSSLAYQMY 333
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig65783.14161.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JIK1_9PHAE6.120e-542.59Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig65783contigH-elongata_contig65783:345..1171 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig65783.14161.1mRNA_H-elongata_contig65783.14161.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig65783 2..2256 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig65783.14161.1 ID=prot_H-elongata_contig65783.14161.1|Name=mRNA_H-elongata_contig65783.14161.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=71bp
MLDKALYEACAEEFERVIAPQTDQVQSDLVEFYKLQRQMGEYMNTNPTSM
ANKLYRFTDMVNSYPPPYPF*
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