mRNA_H-elongata_contig65713.14155.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig65713.14155.1 vs. uniprot
Match: D8LJQ1_ECTSI (Polyprenol reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJQ1_ECTSI) HSP 1 Score: 211 bits (538), Expect = 1.920e-65 Identity = 106/169 (62.72%), Postives = 125/169 (73.96%), Query Frame = 1
Query: 1 GIVFYQLMLITVLAEAPPLGAFVKEAGIFDSGGWRNAVKLGQAMAQSIKIRHALALGKFFVGSVRQHEAIQHLASLR--VGAKTNSYTIPTAGWFKYVSCPHYFAELVIYSSFVLLAGVGGGNLGQGYLLALLFVFANHALVAGQAHAWYRAKFEGYPRYRKRLIPGVW 501
G+V YQLM+ TVL EAPPLG +EA SGG + V A+A S+K+RHA+A+G F +G VRQHEAI+HLASL+ VG K Y IPTAGWF+YVSCPHYFAEL++Y SFVLL G LGQGYL+A +VFAN ALVAG AWY+ KFE YPR R+RLIPGVW
Sbjct: 153 GVVHYQLMVFTVLVEAPPLGLLAEEAWSRSSGGASDIVL---ALATSVKLRHAVAMGLFIIGFVRQHEAIRHLASLKGNVGTKATKYAIPTAGWFRYVSCPHYFAELLVYGSFVLLGSFKGRGLGQGYLVAFAWVFANQALVAGWVQAWYQQKFEDYPRDRRRLIPGVW 318
BLAST of mRNA_H-elongata_contig65713.14155.1 vs. uniprot
Match: A0A7S2W9S8_9STRA (Polyprenol reductase n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W9S8_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 2.120e-21 Identity = 48/106 (45.28%), Postives = 70/106 (66.04%), Query Frame = 1
Query: 175 FFVGSVRQHEAIQHLASLRVGAKTNSYTIPTAGWFKYVSCPHYFAELVIYSSFVLLAGVGGGNLGQGYLLALLFVFANHALVAGQAHAWYRAKFEGYPRYRKRLIP 492
F VGS +QH++ + L+ LR G KT +Y+IP GWF+YVS PHY +E++IY+S +L+ +L LL FV N ++ A + HAWY+ KF+ YP+ R R+IP
Sbjct: 21 FVVGSYQQHKSHKILSDLRQG-KTRAYSIPRMGWFEYVSSPHYLSEILIYAS-ILVQNTQSISL----LLMFTFVVFNLSITAARTHAWYKQKFDDYPKERTRMIP 120
BLAST of mRNA_H-elongata_contig65713.14155.1 vs. uniprot
Match: A0A671TMU2_SPAAU (Polyprenol reductase n=2 Tax=Sparidae TaxID=8169 RepID=A0A671TMU2_SPAAU) HSP 1 Score: 97.8 bits (242), Expect = 2.220e-21 Identity = 52/119 (43.70%), Postives = 70/119 (58.82%), Query Frame = 1
Query: 154 HALALGKFFVGSVRQHEAIQHLASLRVG----AKTNSYTIPTAGWFKYVSCPHYFAELVIYSSFVLLAGVGGGNLGQGYLLALLFVFANHALVAGQAHAWYRAKFEGYPRYRKRLIPGV 498
H + F S+ QH+++ LA LR G +T ++ +P GWF+ VSCPHYFAEL+IY S L+ G L + L +L+VF N AL A H YR+K+E YPR+RK IP V
Sbjct: 200 HVAGIALFLGASLMQHQSMVLLARLRTGKSGAVETLAHRVPNGGWFELVSCPHYFAELLIYISLSLVLG----GLSITWWLVVLYVFFNQALAAQLCHDLYRSKYESYPRHRKAFIPFV 314
BLAST of mRNA_H-elongata_contig65713.14155.1 vs. uniprot
Match: A0A6P7M4I0_BETSP (Polyprenol reductase n=1 Tax=Betta splendens TaxID=158456 RepID=A0A6P7M4I0_BETSP) HSP 1 Score: 95.1 bits (235), Expect = 2.030e-20 Identity = 51/117 (43.59%), Postives = 69/117 (58.97%), Query Frame = 1
Query: 154 HALALGKFFVGSVRQHEAIQHLASLRVG----AKTNSYTIPTAGWFKYVSCPHYFAELVIYSSFVLLAGVGGGNLGQGYLLALLFVFANHALVAGQAHAWYRAKFEGYPRYRKRLIP 492
H G F S+ QH+++ LA LR G +T ++ +P GWF+ VSCPHYFAEL+IY SF L+ G L + L +L+VF N AL A H Y +K+E YP++RK IP
Sbjct: 192 HVAGFGLFAGASLLQHQSMLLLARLRTGRSGAVETLAHRLPRGGWFEVVSCPHYFAELLIYVSFSLIFG----GLSFTWWLVVLYVFFNQALAAQLCHDLYLSKYESYPKHRKAFIP 304
BLAST of mRNA_H-elongata_contig65713.14155.1 vs. uniprot
Match: UPI0015AE7E99 (polyprenol reductase isoform X1 n=3 Tax=Anguilla anguilla TaxID=7936 RepID=UPI0015AE7E99) HSP 1 Score: 95.1 bits (235), Expect = 2.480e-20 Identity = 55/117 (47.01%), Postives = 70/117 (59.83%), Query Frame = 1
Query: 154 HALALGKFFVGSVRQHEAIQHLASLRVGA----KTNSYTIPTAGWFKYVSCPHYFAELVIYSSFVLLAGVGGGNLGQGYLLALLFVFANHALVAGQAHAWYRAKFEGYPRYRKRLIP 492
HA + F GS+ QH ++ LA LR GA +T + +P WF+ VSCPHYFAELVIY S LA V GG + +L+ +L+V N AL A H +YR KFE YP+ RK IP
Sbjct: 206 HAAGILLFLWGSLHQHRCLRLLAHLRTGASGEVQTLEHKVPCGDWFELVSCPHYFAELVIYVS---LAIVTGGRVLTWWLV-VLYVLFNQALAAQLCHEFYRRKFEHYPKQRKAFIP 318
BLAST of mRNA_H-elongata_contig65713.14155.1 vs. uniprot
Match: UPI001C40D8E7 (polyprenol reductase n=1 Tax=Solea senegalensis TaxID=28829 RepID=UPI001C40D8E7) HSP 1 Score: 94.7 bits (234), Expect = 3.000e-20 Identity = 51/119 (42.86%), Postives = 70/119 (58.82%), Query Frame = 1
Query: 154 HALALGKFFVGSVRQHEAIQHLASLRVG----AKTNSYTIPTAGWFKYVSCPHYFAELVIYSSFVLLAGVGGGNLGQGYLLALLFVFANHALVAGQAHAWYRAKFEGYPRYRKRLIPGV 498
H G F S+ QH++ LA LR+G +T +Y++P GWF+ VSCPHYFAEL+IY S L+ G L + L +L+V N AL A H +Y +K+E YP++RK IP V
Sbjct: 196 HVAGFGLFVAASLLQHQSTVLLAKLRMGKSGTVETLAYSMPKGGWFELVSCPHYFAELLIYISLSLVLG----GLSLTWWLVVLYVLFNQALAAQLCHDFYVSKYELYPKHRKAFIPFV 310
BLAST of mRNA_H-elongata_contig65713.14155.1 vs. uniprot
Match: A0A3P8UZ94_CYNSE (Polyprenol reductase n=1 Tax=Cynoglossus semilaevis TaxID=244447 RepID=A0A3P8UZ94_CYNSE) HSP 1 Score: 94.0 bits (232), Expect = 5.830e-20 Identity = 50/119 (42.02%), Postives = 70/119 (58.82%), Query Frame = 1
Query: 154 HALALGKFFVGSVRQHEAIQHLASLRVG----AKTNSYTIPTAGWFKYVSCPHYFAELVIYSSFVLLAGVGGGNLGQGYLLALLFVFANHALVAGQAHAWYRAKFEGYPRYRKRLIPGV 498
H + +G F SV QH ++ LA LR+G +T ++ IPT GWF++VSCPHYFAEL+IY S ++ +L + L +L+V N AL A H Y +K++ YP RK IP V
Sbjct: 196 HVVGVGLFVAASVLQHRSMVLLAGLRIGKSGAVETLAHRIPTGGWFEWVSCPHYFAELLIYISLAFMSE----SLSITWWLVVLYVLFNQALAAQLCHELYISKYDSYPTNRKAFIPFV 310
BLAST of mRNA_H-elongata_contig65713.14155.1 vs. uniprot
Match: UPI0015E1F545 (polyprenol reductase n=1 Tax=Morone saxatilis TaxID=34816 RepID=UPI0015E1F545) HSP 1 Score: 94.0 bits (232), Expect = 6.090e-20 Identity = 50/119 (42.02%), Postives = 68/119 (57.14%), Query Frame = 1
Query: 154 HALALGKFFVGSVRQHEAIQHLASLRVGAK----TNSYTIPTAGWFKYVSCPHYFAELVIYSSFVLLAGVGGGNLGQGYLLALLFVFANHALVAGQAHAWYRAKFEGYPRYRKRLIPGV 498
H + F V S+ QH+++ LA LR G T ++ +P GWF+ VSCPHYFAEL+IY S L+ G L + L +L+V N AL A H Y +K+E YPR+RK IP +
Sbjct: 199 HVAGIALFVVASLMQHQSMVLLARLRTGKSGTVATLAHRVPVGGWFELVSCPHYFAELLIYVSLSLVFG----GLSLTWWLVVLYVLFNQALAAQLCHELYISKYESYPRHRKAFIPFI 313
BLAST of mRNA_H-elongata_contig65713.14155.1 vs. uniprot
Match: UPI001BB247CD (polyprenol reductase-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB247CD) HSP 1 Score: 93.2 bits (230), Expect = 1.030e-19 Identity = 62/165 (37.58%), Postives = 80/165 (48.48%), Query Frame = 1
Query: 1 GIVFYQLMLITVLAEAPPLGAFVKEAGIFDSGGWRNAVKLGQAMAQSIKIRHALALGKFFVGSVRQHEAIQHLASLRVGAKTNS-YTIPTAGWFKYVSCPHYFAELVIYSSFVLLAGVGGGNLGQGYLLALLFVFANHALVAGQAHAWYRAKFEGYPRYRKRLIP 492
GI+FY + I+V+AE P GG A+ L + I+ H L F S+ H A ASLR K S + IP WF YVSCPHYFAE +IY+S GV G + L L FVF+N + + H WY+ KF+ YP+ RK P
Sbjct: 154 GIMFYSFVGISVVAEGPNFSV---------KGGAIQALDL----LKHIRWYHIAGLLMFIWASLHHHRAHVIFASLRKTKKDVSRHMIPQGDWFDYVSCPHYFAECLIYASL----GVILGGYHTTWWLVLAFVFSNQIAASTKVHRWYQDKFDNYPKERKAFFP 301
BLAST of mRNA_H-elongata_contig65713.14155.1 vs. uniprot
Match: A0A833VHB6_9POAL (Polyprenol reductase n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833VHB6_9POAL) HSP 1 Score: 92.8 bits (229), Expect = 2.210e-19 Identity = 48/109 (44.04%), Postives = 63/109 (57.80%), Query Frame = 1
Query: 175 FFVGSVRQHEAIQHLASLRVGAKTNSYTIPTAGWFKYVSCPHYFAELVIYSSFVLLAGVGGGNLGQGYLLALLFVFANHALVAGQAHAWYRAKFEGYPRYRKRLIPGVW 501
FF G Q L SLR Y +P WF YVSCPHYFAE+VIY+ ++ +G GN +LL +FV AN +L A + H WY+ KFE YPR R+ +IP ++
Sbjct: 233 FFWGWFHQLRCHSILGSLRENKGAEEYIVPYGDWFSYVSCPHYFAEIVIYAGILVASG---GNDVTVWLL-FIFVVANLSLAAAETHRWYKQKFEDYPRTRRAIIPFIY 337 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig65713.14155.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig65713.14155.1 >prot_H-elongata_contig65713.14155.1 ID=prot_H-elongata_contig65713.14155.1|Name=mRNA_H-elongata_contig65713.14155.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=161bp MLITVLAEAPPLGAFVKEAGIFDSGGWRNAVKLGQAMAQSIKIRHALALGback to top mRNA from alignment at H-elongata_contig65713:245..1398+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig65713.14155.1 ID=mRNA_H-elongata_contig65713.14155.1|Name=mRNA_H-elongata_contig65713.14155.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1154bp|location=Sequence derived from alignment at H-elongata_contig65713:245..1398+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig65713:245..1398+ >mRNA_H-elongata_contig65713.14155.1 ID=mRNA_H-elongata_contig65713.14155.1|Name=mRNA_H-elongata_contig65713.14155.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=966bp|location=Sequence derived from alignment at H-elongata_contig65713:245..1398+ (Himanthalia elongata Himel1 dioecious)back to top |