mRNA_H-elongata_contig65619.14142.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig65619.14142.1
Unique NamemRNA_H-elongata_contig65619.14142.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig65619.14142.1 vs. uniprot
Match: A0A6H5JEB5_9PHAE (ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JEB5_9PHAE)

HSP 1 Score: 424 bits (1089), Expect = 6.460e-143
Identity = 218/250 (87.20%), Postives = 232/250 (92.80%), Query Frame = 1
Query:   28 RADAIQELAFVDLRYEVENVRPGKITESLTVLDGVSGQANSREMLALMGPSGSGKTSLLNVLAQRVPQKSVSGGVFVDGHPLSKSFKRRMGFVFQDDLCLWNLTVRETVFFAAKLRLPQRTPEKEKEERVAELLELLGLSHVADGIIGKEGRRGISGGERKRVSIGVELITSPDVLFLDEPTSGLDSSTALSIINILDQLTKKGMIVVCSIHQPRSNIFSVFDKVLLLNKGRTVYYGARGSIVKYFETLG 777
            R D+IQELAF+DL+YEVEN+RPG   E+L VL+GVSGQANS EMLALMGPSGSGKTSLLNVLAQRVP KSV+GGVFVDG PLSKSFKRRMGFVFQDD+CLWNLTVRETV FAAKLRLPQ TP+KEK ERVAELLELLGLSHVADGIIGKEGRRGISGGERKRVSIGVELITSPDVLFLDEPTSGLDSSTALSI ++L  LT+KGMIVVCSIHQPRSNIFS FDKVLLL+KG TVYYG+R SIVKYFE LG
Sbjct:   33 RGDSIQELAFLDLKYEVENIRPGMEAETLKVLEGVSGQANSGEMLALMGPSGSGKTSLLNVLAQRVPHKSVTGGVFVDGSPLSKSFKRRMGFVFQDDMCLWNLTVRETVMFAAKLRLPQSTPDKEKHERVAELLELLGLSHVADGIIGKEGRRGISGGERKRVSIGVELITSPDVLFLDEPTSGLDSSTALSITHVLRTLTRKGMIVVCSIHQPRSNIFSEFDKVLLLSKGNTVYYGSRSSIVKYFEALG 282          
BLAST of mRNA_H-elongata_contig65619.14142.1 vs. uniprot
Match: A0A835YP26_9STRA (ATP-binding cassette superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP26_9STRA)

HSP 1 Score: 314 bits (804), Expect = 2.160e-99
Identity = 171/275 (62.18%), Postives = 198/275 (72.00%), Query Frame = 1
Query:   40 IQELAFVDLRYEVENVRPGKIT-----------------------------ESLTVLDGVSGQANSREMLALMGPSGSGKTSLLNVLAQRVPQKSVSGGVFVDGHPLSKSFKRRMGFVFQDDLCLWNLTVRETVFFAAKLRLPQRTPEKEKEERVAELLELLGLSHVADGIIGKEGRRGISGGERKRVSIGVELITSPDVLFLDEPTSGLDSSTALSIINILDQLTKKGMIVVCSIHQPRSNIFSVFDKVLLLNKGRTVYYGARGSIVKYFETLG 777
            IQEL+F+DL Y ++    GK                                 + +LD VSG+A S EMLALMGPSGSGKTSLLNVLAQRVP K+V GG +VDG PL+K+FKR+MGFVFQDDL LWNLTVRET+ FAAKLRLPQ  P  EKEE V +L+E LGL+  A  IIGKE RRG+SGGERKR SIGVEL+T+P VLFLDEPTSGLDSSTALSI+ +L QL + G+IVVCSIHQPR+NIF+ FDKVLLL KGR  YYG +  +V YF  LG
Sbjct:   46 IQELSFLDLCYSIDAPTMGKQRVPRKDGERRRSSLFSRSRNGDAGGKAGEKAKMNILDHVSGEARSGEMLALMGPSGSGKTSLLNVLAQRVPSKNVHGGTYVDGKPLTKAFKRQMGFVFQDDLMLWNLTVRETMLFAAKLRLPQSIPLSEKEECVDDLIEKLGLTDCAHSIIGKESRRGVSGGERKRASIGVELVTAPAVLFLDEPTSGLDSSTALSIVTLLHQLARGGVIVVCSIHQPRANIFNQFDKVLLLVKGRIAYYGRQRDMVPYFSGLG 320          
BLAST of mRNA_H-elongata_contig65619.14142.1 vs. uniprot
Match: A0A6U1MQ19_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MQ19_9STRA)

HSP 1 Score: 271 bits (694), Expect = 2.080e-83
Identity = 143/249 (57.43%), Postives = 180/249 (72.29%), Query Frame = 1
Query:   40 IQELAFVDLRYEVENVRPGK---ITESLTVLDGVSGQANSREMLALMGPSGSGKTSLLNVLAQRVPQKSVSGGVFVDGHPLSKSFKRRMGFVFQDDLCLWNLTVRETVFFAAKLRLPQRTPEKEKEERVAELLELLGLSHVADGIIGKEGRRGISGGERKRVSIGVELITSPDVLFLDEPTSGLDSSTALSIINILDQLTKKGMIVVCSIHQPRSNIFSVFDKVLLLNKGRTVYYGARGSIVKYFETLG 777
            +++  F DL Y+V      K   +     +L  VSG  +  +M+ALMGPSGSGKTSLLNVLAQRV Q SVSG +F++G P++KS+KRRMGFVFQDDL L NLTVRET+ ++AKLRLPQ  P   KE +V  LL+LL L   A   IG EG+RGISGGERKR +IGVELITSP ++FLDEPTSGLDS+TAL  + +L +LT  G + + SIHQPR+NIF  F KVLLL  G  VY+G+ G+++ YF + G
Sbjct:   67 VEQFDFQDLSYQVRVKGAAKQQSVQGMKQILSNVSGTVHRGDMVALMGPSGSGKTSLLNVLAQRVDQSSVSGKIFINGLPVTKSWKRRMGFVFQDDLMLSNLTVRETIMYSAKLRLPQSMPTATKEAKVDALLDLLSLQKCAHSKIGSEGKRGISGGERKRTAIGVELITSPSIVFLDEPTSGLDSTTALQTVTLLKELTSLGTVFISSIHQPRANIFYQFHKVLLLQSGTPVYFGSTGNVLDYFSSQG 315          
BLAST of mRNA_H-elongata_contig65619.14142.1 vs. uniprot
Match: R1DY78_EMIHU (ABC transporter domain-containing protein n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DY78_EMIHU)

HSP 1 Score: 225 bits (574), Expect = 3.640e-66
Identity = 127/238 (53.36%), Postives = 164/238 (68.91%), Query Frame = 1
Query:   82 NVRPGKITESLTVLDGVSGQANSREMLALMGPSGSGKTSLLNVLAQRVPQ--KSVSGGVFVDGHPLSKSFKRRMGFVFQDDLCLWNLTVRETVFFAAKLRLPQRTPEKEKEERVAELLELLGLSHVADGIIGKEGRRGISGGERKRVSIGVELITSPDVLFLDEPTSGLDSSTALSIINILDQLTKKG-MIVVCSIHQPRSNIFSVFDKVLLLNKGRTVYYGARGSIVKYFE-TLGES 783
            + R     E   +LD VSG     EM+ALMGPSGSGKTSLL++LA R P+  K  +G V + G   +K+F RR GFVFQDDL L  LTVRET+ FAA+LRLPQ   ++E++ RV   L+ LGL H A   IG E +RG+SGGERKR ++G EL+  P +LFLDEPTSGLD++TALS+ + L  + +   MI+V S+HQPRSNIFS+FD++LLL+ GR  Y GA    V Y +  LGE+
Sbjct:   38 SARTSNAGERKVILDDVSGCVAPSEMIALMGPSGSGKTSLLSLLAGRAPKGAKLEAGEVTLGGAAPTKAFFRRCGFVFQDDLLLAALTVRETIEFAARLRLPQSLGDEERDRRVQTTLQQLGLEHCAHTAIGSEKKRGVSGGERKRTAVGAELVARPPLLFLDEPTSGLDAATALSLTSCLQSVARTNRMILVLSVHQPRSNIFSLFDQLLLLSGGRVAYNGAAADAVAYMQGALGEA 275          
BLAST of mRNA_H-elongata_contig65619.14142.1 vs. uniprot
Match: A0A8J5EXG5_ZINOF (ABC transporter domain-containing protein n=3 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5EXG5_ZINOF)

HSP 1 Score: 228 bits (580), Expect = 5.980e-66
Identity = 123/246 (50.00%), Postives = 168/246 (68.29%), Query Frame = 1
Query:   49 LAFVDLRYEVENV--RPGKITESLT-VLDGVSGQANSREMLALMGPSGSGKTSLLNVLAQRVPQKSVSGGVFVDGHPLSKSFKRRMGFVFQDDLCLWNLTVRETVFFAAKLRLPQRTPEKEKEERVAELLELLGLSHVADGIIGKEGRRGISGGERKRVSIGVELITSPDVLFLDEPTSGLDSSTALSIINILDQLTKKGMIVVCSIHQPRSNIFSVFDKVLLLNKGRTVYYGARGSIVKYFETLG 777
            L F D+ Y+V  V  RP  ++ S+  VL GV+G     E+LALMGPSG GKT+LLN+L+ R+  KS SG +  +  P SK+ K+R+GFV QDD+   +LTVRET+ +AA LRLP+   +++KEERV  ++  LGL    D I+G    RGISGGERKRV IG E++  P +LFLDEPTSGLDS+TA+ II +L  +   G  VV +IHQP S IF++FDK++LL KG ++Y+G     + YF ++G
Sbjct:  158 LKFSDVGYKVRRVNERPSPVSNSMEYVLQGVTGSVEPGEILALMGPSGGGKTTLLNILSGRIKIKSDSGSITYNDQPYSKALKQRIGFVLQDDVVFTSLTVRETLTYAALLRLPKTLTKQQKEERVMNVIFDLGLERCQDMIVGGASARGISGGERKRVCIGSEILLDPSLLFLDEPTSGLDSTTAIRIIQMLLNIAHAGKSVVITIHQPSSKIFNMFDKLILLGKGSSLYFGKASEAMIYFSSIG 403          
BLAST of mRNA_H-elongata_contig65619.14142.1 vs. uniprot
Match: A0A7J8LFV0_9ROSI (ABC transporter domain-containing protein n=2 Tax=Gossypium TaxID=3633 RepID=A0A7J8LFV0_9ROSI)

HSP 1 Score: 217 bits (552), Expect = 7.710e-66
Identity = 115/245 (46.94%), Postives = 163/245 (66.53%), Query Frame = 1
Query:   43 QELAFVDLRYEVENVRPGKITESLTVLDGVSGQANSREMLALMGPSGSGKTSLLNVLAQRVPQKSVSGGVFVDGHPLSKSFKRRMGFVFQDDLCLWNLTVRETVFFAAKLRLPQRTPEKEKEERVAELLELLGLSHVADGIIGKEGRRGISGGERKRVSIGVELITSPDVLFLDEPTSGLDSSTALSIINILDQLTKKGMIVVCSIHQPRSNIFSVFDKVLLLNKGRTVYYGARGSIVKYFETLG 777
            +E  F D+ Y+V  ++     E   +L+G++G  N  E+LALMGPSGSGKT+LLN+L  R+ Q +VSG +  +  P SK  K R+GFV QDD+   +LTV+ET+ +AA+LRLP+    ++KE+R  +++  LGL    D +IG    RG+SGGERKRV IG E+I +P +LFLDEPTSGLDS+TAL  I  L  + + G  V+ +IHQP S +F  FDK++LL KG  +Y+G     + YF ++G
Sbjct:   22 KERRFTDVTYKVI-IKGMTSCEERDILNGITGAVNPGEVLALMGPSGSGKTTLLNLLGGRLIQSTVSGSITYNDQPYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAARLRLPKVLTRQQKEKRAVDVIYELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRTIQTLQDIAEVGKTVITTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAIDYFSSIG 265          
BLAST of mRNA_H-elongata_contig65619.14142.1 vs. uniprot
Match: A0A067FX70_CITSI (ABC transporter domain-containing protein (Fragment) n=3 Tax=Citrus sinensis TaxID=2711 RepID=A0A067FX70_CITSI)

HSP 1 Score: 221 bits (563), Expect = 2.110e-65
Identity = 115/243 (47.33%), Postives = 166/243 (68.31%), Query Frame = 1
Query:   49 LAFVDLRYEVENVRPGKITESLTVLDGVSGQANSREMLALMGPSGSGKTSLLNVLAQRVPQKSVSGGVFVDGHPLSKSFKRRMGFVFQDDLCLWNLTVRETVFFAAKLRLPQRTPEKEKEERVAELLELLGLSHVADGIIGKEGRRGISGGERKRVSIGVELITSPDVLFLDEPTSGLDSSTALSIINILDQLTKKGMIVVCSIHQPRSNIFSVFDKVLLLNKGRTVYYGARGSIVKYFETLG 777
            L F D+ Y+V  ++    +E   +L+G++G  N  E+LALMGPSGSGKT+LLN+L+ R+ + +V G +  + HP SKS K ++GFV QDD+   +LTV+ET+ +AA LRLP    +++KE+R  +++  LGL    D +IG    RG+SGGERKRV IG E+I +P +LFLDEPTSGLDS+TAL I+ +L  + + G  VV +IHQP S +F  FDK++LL KG  +Y+G     + YF ++G
Sbjct:   23 LKFTDVTYKVI-LKGMTSSEEKDILNGITGSVNPGEVLALMGPSGSGKTTLLNLLSGRLMEPTVGGSITYNDHPYSKSLKSKIGFVTQDDVLFPHLTVKETLTYAALLRLPNTLTKQQKEKRAIDVINELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMAYFSSIG 264          
BLAST of mRNA_H-elongata_contig65619.14142.1 vs. uniprot
Match: A0A067G553_CITSI (ABC transporter domain-containing protein (Fragment) n=2 Tax=Citrus TaxID=2706 RepID=A0A067G553_CITSI)

HSP 1 Score: 221 bits (563), Expect = 5.440e-65
Identity = 115/243 (47.33%), Postives = 166/243 (68.31%), Query Frame = 1
Query:   49 LAFVDLRYEVENVRPGKITESLTVLDGVSGQANSREMLALMGPSGSGKTSLLNVLAQRVPQKSVSGGVFVDGHPLSKSFKRRMGFVFQDDLCLWNLTVRETVFFAAKLRLPQRTPEKEKEERVAELLELLGLSHVADGIIGKEGRRGISGGERKRVSIGVELITSPDVLFLDEPTSGLDSSTALSIINILDQLTKKGMIVVCSIHQPRSNIFSVFDKVLLLNKGRTVYYGARGSIVKYFETLG 777
            L F D+ Y+V  ++    +E   +L+G++G  N  E+LALMGPSGSGKT+LLN+L+ R+ + +V G +  + HP SKS K ++GFV QDD+   +LTV+ET+ +AA LRLP    +++KE+R  +++  LGL    D +IG    RG+SGGERKRV IG E+I +P +LFLDEPTSGLDS+TAL I+ +L  + + G  VV +IHQP S +F  FDK++LL KG  +Y+G     + YF ++G
Sbjct:   23 LKFTDVTYKVI-LKGMTSSEEKDILNGITGSVNPGEVLALMGPSGSGKTTLLNLLSGRLMEPTVGGSITYNDHPYSKSLKSKIGFVTQDDVLFPHLTVKETLTYAALLRLPNTLTKQQKEKRAIDVINELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMAYFSSIG 264          
BLAST of mRNA_H-elongata_contig65619.14142.1 vs. uniprot
Match: UPI000CE1D65A (ABC transporter G family member 22-like n=1 Tax=Quercus suber TaxID=58331 RepID=UPI000CE1D65A)

HSP 1 Score: 221 bits (562), Expect = 1.270e-64
Identity = 115/243 (47.33%), Postives = 165/243 (67.90%), Query Frame = 1
Query:   49 LAFVDLRYEVENVRPGKITESLTVLDGVSGQANSREMLALMGPSGSGKTSLLNVLAQRVPQKSVSGGVFVDGHPLSKSFKRRMGFVFQDDLCLWNLTVRETVFFAAKLRLPQRTPEKEKEERVAELLELLGLSHVADGIIGKEGRRGISGGERKRVSIGVELITSPDVLFLDEPTSGLDSSTALSIINILDQLTKKGMIVVCSIHQPRSNIFSVFDKVLLLNKGRTVYYGARGSIVKYFETLG 777
            L F D+ Y+V  ++  + +E   +L+G++G  N  E+LALMGPSGSGKT+LLN+L  R+ Q +V G +  + HP SK  K R+GFV QDD+   +LTV+ET+ +AA LRLP+   +++KE+R  +++  LGL    D +IG    RG+SGGERKRVSIG E+I +P +LFLDEPTSGLDS+TA+  + +L  + + G  VV +IHQP S +F  FDK++LL KG  +Y+G       YF ++G
Sbjct:  148 LKFTDVSYKVI-LKGMRTSEEKDILNGITGSVNPGEVLALMGPSGSGKTTLLNLLGGRLIQPTVRGSITYNDHPYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAALLRLPKTLTKEQKEKRAIDVIHELGLERCQDTMIGGSFVRGVSGGERKRVSIGNEIIINPSLLFLDEPTSGLDSTTAMRTVQLLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEATVYFSSIG 389          
BLAST of mRNA_H-elongata_contig65619.14142.1 vs. uniprot
Match: A0A443NPE6_9MAGN (ABC transporter-like protein n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443NPE6_9MAGN)

HSP 1 Score: 223 bits (569), Expect = 1.480e-64
Identity = 119/243 (48.97%), Postives = 166/243 (68.31%), Query Frame = 1
Query:   49 LAFVDLRYEVENVRPGKITESLTVLDGVSGQANSREMLALMGPSGSGKTSLLNVLAQRVPQKSVSGGVFVDGHPLSKSFKRRMGFVFQDDLCLWNLTVRETVFFAAKLRLPQRTPEKEKEERVAELLELLGLSHVADGIIGKEGRRGISGGERKRVSIGVELITSPDVLFLDEPTSGLDSSTALSIINILDQLTKKGMIVVCSIHQPRSNIFSVFDKVLLLNKGRTVYYGARGSIVKYFETLG 777
            L F D++Y+V  ++  + T    +L G+SG A+  E+LALMGPSGSGKT+LLN+L+ RV   +  G +  +  P SKS KRR+GFV QDD+   +LTV+ET+ +AA LRLP+   +++KEER  +++  LGL    D +IG    RG+SGGERKRV IG E+I +P VLFLDEPTSGLDS+TAL I+ +L  + + G  VV +IHQP S +F  FDK++LL KG  +Y+G     + YF ++G
Sbjct:  140 LKFTDVKYKVV-LKSVRGTVEKDILHGISGSADPGEVLALMGPSGSGKTTLLNLLSGRVTDTTSGGSITYNDQPYSKSLKRRIGFVTQDDVLFPHLTVKETLTYAALLRLPKMLTKQQKEERAMDVISELGLERCQDTLIGGSFVRGVSGGERKRVCIGNEIIINPSVLFLDEPTSGLDSTTALRIVQMLHDIAEDGKTVVTTIHQPSSRLFLKFDKLILLGKGSLLYFGKASEALVYFSSIG 381          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig65619.14142.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JEB5_9PHAE6.460e-14387.20ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
A0A835YP26_9STRA2.160e-9962.18ATP-binding cassette superfamily n=1 Tax=Tribonema... [more]
A0A6U1MQ19_9STRA2.080e-8357.43Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
R1DY78_EMIHU3.640e-6653.36ABC transporter domain-containing protein n=3 Tax=... [more]
A0A8J5EXG5_ZINOF5.980e-6650.00ABC transporter domain-containing protein n=3 Tax=... [more]
A0A7J8LFV0_9ROSI7.710e-6646.94ABC transporter domain-containing protein n=2 Tax=... [more]
A0A067FX70_CITSI2.110e-6547.33ABC transporter domain-containing protein (Fragmen... [more]
A0A067G553_CITSI5.440e-6547.33ABC transporter domain-containing protein (Fragmen... [more]
UPI000CE1D65A1.270e-6447.33ABC transporter G family member 22-like n=1 Tax=Qu... [more]
A0A443NPE6_9MAGN1.480e-6448.97ABC transporter-like protein n=1 Tax=Cinnamomum mi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig65619contigH-elongata_contig65619:605..2877 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score400.2
Seed ortholog evalue7.4e-109
Seed eggNOG ortholog2880.D8LI56
KEGG koko:K05681,ko:K21396
KEGG TC3.A.1.204
KEGG Pathwayko01523,ko02010,ko04976,map01523,map02010,map04976
EggNOG free text desc.ATPase activity, coupled to transmembrane movement of substances
EggNOG OGsCOG1131@1,KOG0061@2759
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000,ko04090,ko04147
Hectar predicted targeting categoryother localisation
Exons4
Model size783
Cds size783
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig65619.14142.1prot_H-elongata_contig65619.14142.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig65619 605..2877 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931042.7024016-CDS-H-elongata_contig65619:604..8041622931042.7024016-CDS-H-elongata_contig65619:604..804Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig65619 605..804 -
1691679674.2961135-CDS-H-elongata_contig65619:604..8041691679674.2961135-CDS-H-elongata_contig65619:604..804Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig65619 605..804 -
1622931042.719874-CDS-H-elongata_contig65619:1252..15231622931042.719874-CDS-H-elongata_contig65619:1252..1523Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig65619 1253..1523 -
1691679674.3059244-CDS-H-elongata_contig65619:1252..15231691679674.3059244-CDS-H-elongata_contig65619:1252..1523Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig65619 1253..1523 -
1622931042.7341266-CDS-H-elongata_contig65619:2241..23851622931042.7341266-CDS-H-elongata_contig65619:2241..2385Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig65619 2242..2385 -
1691679674.3153806-CDS-H-elongata_contig65619:2241..23851691679674.3153806-CDS-H-elongata_contig65619:2241..2385Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig65619 2242..2385 -
1622931042.749263-CDS-H-elongata_contig65619:2709..28771622931042.749263-CDS-H-elongata_contig65619:2709..2877Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig65619 2710..2877 -
1691679674.3257148-CDS-H-elongata_contig65619:2709..28771691679674.3257148-CDS-H-elongata_contig65619:2709..2877Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig65619 2710..2877 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig65619.14142.1

>prot_H-elongata_contig65619.14142.1 ID=prot_H-elongata_contig65619.14142.1|Name=mRNA_H-elongata_contig65619.14142.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=261bp
MGRHARSLRRADAIQELAFVDLRYEVENVRPGKITESLTVLDGVSGQANS
REMLALMGPSGSGKTSLLNVLAQRVPQKSVSGGVFVDGHPLSKSFKRRMG
FVFQDDLCLWNLTVRETVFFAAKLRLPQRTPEKEKEERVAELLELLGLSH
VADGIIGKEGRRGISGGERKRVSIGVELITSPDVLFLDEPTSGLDSSTAL
SIINILDQLTKKGMIVVCSIHQPRSNIFSVFDKVLLLNKGRTVYYGARGS
IVKYFETLGES
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mRNA from alignment at H-elongata_contig65619:605..2877-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig65619.14142.1 ID=mRNA_H-elongata_contig65619.14142.1|Name=mRNA_H-elongata_contig65619.14142.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2273bp|location=Sequence derived from alignment at H-elongata_contig65619:605..2877- (Himanthalia elongata Himel1 dioecious)
ATGGGCCGACACGCGCGCTCCCTGCGCAGGGCAGATGCCATCCAGGAGTT GGCGTTTGTGGACCTGAGGTATGAGGTGGAGAACGTCCGGCCGGGTAAGA TCACGGAGTCGCTCACAGTCCTCGACGGCGTATCCGGGCAGGCGAATTCG CGGGAGATGCTTGCGTTGGTGAGAGAGAAAGAGAGGCAGAGGCAGATACA TAAGGCATAGGAAGCCTTGACGTGTGTTGCGCGGTGCGGCGTTCCACGCT CTTGGGAGGGATCACAGCAGTGGTGGATCGGATCTAGCCGGATCGAGGTG CAAAAACGAAGCGTAGTAAGTACAAGGTACAGGGTACAGGAAGGGGGGGG GGTTATATTGTCGTGGATTGTGGGATCAACAATGAATGTAGTATATTTCC ACTGTTTAGTTTAAGATTAATTTACCGCCTCCCTCCTTTTATTTTTCTCT CGATTTTTCGATTTTTCGATCGGTGGATCCAATCCGATCCAGATGGGTCC CTCGGGCAGCGGCAAGACGAGTCTCCTAAATGTGCTGGCGCAAAGGGTTC CGCAGAAGAGCGTCTCCGGGGGCGTGTTCGTGGACGGCCACCCCCTCTCC AAGTCTTTCAAGCGCCGCATGGGTTTCGTCTTCCAGGTGCACTGAATGCC TCCGTTTTTATTTTCTGCATTTTTCTTTTCTTTTCCATTTTTGCATTTTT CGTGGCTTTCAGTATACCACGAGAAAACCATCGCAACGGTAACCTGGCTA TCTAACAAGTTTTGTTTGTTTGTGTGTAGCCTTGCTCGCGGCCGAATTCG TTTGGTGGAGCATTGCGAGCAAGGCTAAACATATCGTTGAAATCCTGAAA TGCGGGTTCACATCGAAACCATGCACTTCTATAAGATCGTCTTTCCCTTG ATAATTTAAAATCTTCCTCTTCTTTTTTCGCCCCTCCCCTCATTTTGTTG GTGTAAATCGTCCGAAATATGAAAATATGTCCCTTTTTTTTTTGGTCAGG AATAATCGAATCCGAATCCAATTTATATATAGCAGACACACACACACACA CACACATCGCAGAAGAGAGAACGTTGGTTCAATAGGTGCCGACATGGGCT AGATCGAGAACAAGGAAACAGATAGGAAAGCGGAAGACGCCGTGGAGAGA GTATGTGCCCCCTTTGCCATATCTGATTGGAGATTTTCGTAACAAATGTC ATTCATCCCCCATTGGGAGGGTCAATAATGCGAGTAGCCTAGAACAAGGC TGGATTGCGTGGTTATATGCAATTTAATAAATAAATACATACATACCCAC ACGCAAACACACTTTTAAAGATATTACCGTGCGCTTGCGACCGGCGAACA CCAGGATGATCTGTGCCTTTGGAACCTCACGGTCCGGGAAACCGTGTTCT TCGCCGCCAAGCTGCGTCTGCCGCAAAGGACCCCGGAAAAAGAAAAAGAA GAGCGCGTCGCGGAACTCCTAGAGCTGCTCGGGCTTTCCCACGTGGCCGA CGGCATTATTGGGAAGGAGGGGAGGCGGGGGATTTCTGGCGGGGAGCGCA AGCGCGTCAGCATCGGGGTGGAGCTGATTACCAGCCCCGACGTACTTTTC CTGGACGAGCCTACGTCCGGCCTCGGTGAGGGGCGTGGTTCTTCGCCTTC CGTCGTTGAGGGGTGTGGCCTACCACGTGTTTGGGGAGGTGGTGGTGGGG GGGGGTAAATGGATGATAGAGGAAGCCGCAAGATAAACGAAAGATTTGTT AATTAATCAATTAATGAAGTGAAATGCATACCTAGTGCCAAATATAGCGT AGAGTATAAGAGTAGATAATACTATAGTATATAGGCTTTAGTACCATAGT GCCAAGAATTTTGGGGGGTTTGTAGAGGGAAAAGAGAGGTTGGGATGAAA ATCAGCGGTGGTGGTGGCTCTGCAAGTGCGGTGGAATCTATCGGCACGTT AGCTTTACAATTTCGTCTCCGTCTCATCATGGCGCGTCTGCTGCCCCCCC CCTCCCCCCGCCCCCGATCTCCGCCTTCCTCTCATATATCAACTCCAACA CACACACACAAACAAACACAAAGACTCGAGCACGGCCCTCAGCATCATCA ACATTCTCGACCAGCTCACGAAGAAGGGGATGATCGTGGTGTGCTCCATC CACCAGCCTCGCTCGAACATCTTCAGCGTCTTCGACAAGGTGCTCCTGCT GAACAAGGGACGGACGGTGTACTACGGAGCCCGCGGATCGATCGTAAAGT ACTTCGAGACGCTGGGTGAGAGC
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Coding sequence (CDS) from alignment at H-elongata_contig65619:605..2877-

>mRNA_H-elongata_contig65619.14142.1 ID=mRNA_H-elongata_contig65619.14142.1|Name=mRNA_H-elongata_contig65619.14142.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1566bp|location=Sequence derived from alignment at H-elongata_contig65619:605..2877- (Himanthalia elongata Himel1 dioecious)
ATGGGCCGACACGCGCGCTCCCTGCGCAGGGCAGATGCCATCCAGGAGTT
GGCGTTTGTGGACCTGAGGTATGAGGTGGAGAACGTCCGGCCGGGTAAGA
TCACGGAGTCGCTCACAGTCCTCGACGGCGTATCCGGGCAGGCGAATTCG
CGGGAGATGCTTGCGTTGATGGGCCGACACGCGCGCTCCCTGCGCAGGGC
AGATGCCATCCAGGAGTTGGCGTTTGTGGACCTGAGGTATGAGGTGGAGA
ACGTCCGGCCGGGTAAGATCACGGAGTCGCTCACAGTCCTCGACGGCGTA
TCCGGGCAGGCGAATTCGCGGGAGATGCTTGCGTTGATGGGTCCCTCGGG
CAGCGGCAAGACGAGTCTCCTAAATGTGCTGGCGCAAAGGGTTCCGCAGA
AGAGCGTCTCCGGGGGCGTGTTCGTGGACGGCCACCCCCTCTCCAAGTCT
TTCAAGCGCCGCATGGGTTTCGTCTTCCAGATGGGTCCCTCGGGCAGCGG
CAAGACGAGTCTCCTAAATGTGCTGGCGCAAAGGGTTCCGCAGAAGAGCG
TCTCCGGGGGCGTGTTCGTGGACGGCCACCCCCTCTCCAAGTCTTTCAAG
CGCCGCATGGGTTTCGTCTTCCAGGATGATCTGTGCCTTTGGAACCTCAC
GGTCCGGGAAACCGTGTTCTTCGCCGCCAAGCTGCGTCTGCCGCAAAGGA
CCCCGGAAAAAGAAAAAGAAGAGCGCGTCGCGGAACTCCTAGAGCTGCTC
GGGCTTTCCCACGTGGCCGACGGCATTATTGGGAAGGAGGGGAGGCGGGG
GATTTCTGGCGGGGAGCGCAAGCGCGTCAGCATCGGGGTGGAGCTGATTA
CCAGCCCCGACGTACTTTTCCTGGACGAGCCTACGTCCGGCCTCGGATGA
TCTGTGCCTTTGGAACCTCACGGTCCGGGAAACCGTGTTCTTCGCCGCCA
AGCTGCGTCTGCCGCAAAGGACCCCGGAAAAAGAAAAAGAAGAGCGCGTC
GCGGAACTCCTAGAGCTGCTCGGGCTTTCCCACGTGGCCGACGGCATTAT
TGGGAAGGAGGGGAGGCGGGGGATTTCTGGCGGGGAGCGCAAGCGCGTCA
GCATCGGGGTGGAGCTGATTACCAGCCCCGACGTACTTTTCCTGGACGAG
CCTACGTCCGGCCTCGACTCGAGCACGGCCCTCAGCATCATCAACATTCT
CGACCAGCTCACGAAGAAGGGGATGATCGTGGTGTGCTCCATCCACCAGC
CTCGCTCGAACATCTTCAGCGTCTTCGACAAGGTGCTCCTGCTGAACAAG
GGACGGACGGTGTACTACGGAGCCCGCGGATCGATCGTAAAGTACTTCGA
GACGCTGGGTGAGAGCACTCGAGCACGGCCCTCAGCATCATCAACATTCT
CGACCAGCTCACGAAGAAGGGGATGATCGTGGTGTGCTCCATCCACCAGC
CTCGCTCGAACATCTTCAGCGTCTTCGACAAGGTGCTCCTGCTGAACAAG
GGACGGACGGTGTACTACGGAGCCCGCGGATCGATCGTAAAGTACTTCGA
GACGCTGGGTGAGAGC
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