prot_H-elongata_contig65545.14137.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig65545.14137.1
Unique Nameprot_H-elongata_contig65545.14137.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length212
Homology
BLAST of mRNA_H-elongata_contig65545.14137.1 vs. uniprot
Match: D7G5A2_ECTSI (Probable chromatin remodelling complex ATPase chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5A2_ECTSI)

HSP 1 Score: 197 bits (500), Expect = 1.700e-54
Identity = 117/194 (60.31%), Postives = 144/194 (74.23%), Query Frame = 0
Query:    2 SGAGSNSAPVKMVMSAYAYFQTEQYTNNKDDFIGLSVGKAGAEIARRWKSMGTRERARYQALHAEDRKRFEMESRARDAEIAAKQAAKRQARHADPASKSYMRERALVRPGGPKRERRITMEEDMSPERLAARKKAKQQRDEQKAGRLAREAESDRQKKSIAAAAAAMARKRIKYILRQSDIFATHFGVTLSES 195
            SGAG+  APVK   SAY +FQ +QY+N+KD+F GL++G+ GAEI+RRW+ +   ER+R+ AL AEDRKRF+ ES ARDAE+AA+Q A R AR+ADPAS +YMRERA V P   K+ER++T EEDMS ERL AR+ AK++R +QK  RLA EAE               ARKRIKYILRQSDIFATHFGV LS+S
Sbjct:    4 SGAGAFGAPVKAATSAYMFFQGDQYSNHKDEFAGLALGQQGAEISRRWRELPQEERSRFDALAAEDRKRFQEESEARDAEVAARQEANRAARYADPASSTYMRERASVEP---KKERKVTREEDMSEERLEARRLAKEKRAKQKDARLAAEAEXXXXXXXXXXXXXXXARKRIKYILRQSDIFATHFGVALSDS 194          
BLAST of mRNA_H-elongata_contig65545.14137.1 vs. uniprot
Match: A0A1Y2X1X1_9PEZI (HMG box domain-containing protein n=18 Tax=Fungi TaxID=4751 RepID=A0A1Y2X1X1_9PEZI)

HSP 1 Score: 56.2 bits (134), Expect = 4.830e-7
Identity = 29/70 (41.43%), Postives = 44/70 (62.86%), Query Frame = 0
Query:   12 KMVMSAYAYFQTEQYTNNKDDFIGLSVGKAGAEIARRWKSMGTRERARYQALHAEDRKRFEMESRARDAE 81
            K  +SAY +F  EQ  N +D+  G+S G+ G  +  RWK++  ++RA Y+A  A D+KR+E E +A  AE
Sbjct:   27 KRGLSAYMFFANEQRENVRDENPGISFGQVGKILGERWKALNDKQRAPYEAKAAADKKRYEDEKQAYQAE 96          
BLAST of mRNA_H-elongata_contig65545.14137.1 vs. uniprot
Match: T5AGK8_OPHSC (HMG box protein n=2 Tax=Ophiocordyceps sinensis TaxID=72228 RepID=T5AGK8_OPHSC)

HSP 1 Score: 55.1 bits (131), Expect = 1.240e-6
Identity = 28/70 (40.00%), Postives = 44/70 (62.86%), Query Frame = 0
Query:   12 KMVMSAYAYFQTEQYTNNKDDFIGLSVGKAGAEIARRWKSMGTRERARYQALHAEDRKRFEMESRARDAE 81
            K  +SAY +F  EQ  N +D+  G+S G+ G  +  RWK++  ++R  Y+A  A D+KR+E E +A +AE
Sbjct:   23 KRGLSAYMFFANEQRENVRDENPGISFGQVGKLLGERWKALNDKQRGPYEAKAAADKKRYEDEKQAYNAE 92          
BLAST of mRNA_H-elongata_contig65545.14137.1 vs. uniprot
Match: A0A369H951_9HYPO (HMG box domain-containing protein n=11 Tax=Hypocreales TaxID=5125 RepID=A0A369H951_9HYPO)

HSP 1 Score: 55.1 bits (131), Expect = 1.360e-6
Identity = 28/70 (40.00%), Postives = 45/70 (64.29%), Query Frame = 0
Query:   12 KMVMSAYAYFQTEQYTNNKDDFIGLSVGKAGAEIARRWKSMGTRERARYQALHAEDRKRFEMESRARDAE 81
            K  +SAY +F  EQ  N +++  G+S G+ G  +  RWK++  ++RA Y+A  A D+KR+E E +A +AE
Sbjct:   26 KRGLSAYMFFANEQRENVREENPGISFGQVGKILGERWKALNEKQRAPYEAKAAADKKRYEDEKQAYNAE 95          
BLAST of mRNA_H-elongata_contig65545.14137.1 vs. uniprot
Match: NHP6_NEUCR (Non-histone chromosomal protein 6 n=6 Tax=Sordariaceae TaxID=5148 RepID=NHP6_NEUCR)

HSP 1 Score: 54.7 bits (130), Expect = 2.030e-6
Identity = 28/70 (40.00%), Postives = 45/70 (64.29%), Query Frame = 0
Query:   12 KMVMSAYAYFQTEQYTNNKDDFIGLSVGKAGAEIARRWKSMGTRERARYQALHAEDRKRFEMESRARDAE 81
            K  +SAY +F  EQ  N +++  G+S G+ G  +  RWK++  ++RA Y+A  A D+KR+E E +A +AE
Sbjct:   27 KRGLSAYMFFANEQRENVREENPGVSFGQVGKILGERWKALSDKQRAPYEAKAAADKKRYEDEKQAYNAE 96          
BLAST of mRNA_H-elongata_contig65545.14137.1 vs. uniprot
Match: A0A2C5YJL9_9HYPO (HMG box domain-containing protein n=2 Tax=Ophiocordyceps australis TaxID=1399860 RepID=A0A2C5YJL9_9HYPO)

HSP 1 Score: 53.9 bits (128), Expect = 3.570e-6
Identity = 27/70 (38.57%), Postives = 45/70 (64.29%), Query Frame = 0
Query:   12 KMVMSAYAYFQTEQYTNNKDDFIGLSVGKAGAEIARRWKSMGTRERARYQALHAEDRKRFEMESRARDAE 81
            K  +SAY +F  EQ  N +++  G+S G+ G  +  RWK++  ++RA Y+A  A D+KR+E E +A +A+
Sbjct:   25 KRGLSAYMFFANEQRENVREENPGISFGQVGKILGERWKALNEKQRAPYEAKAATDKKRYEDEKQAYNAD 94          
BLAST of mRNA_H-elongata_contig65545.14137.1 vs. uniprot
Match: C7YHL0_FUSV7 (HMG box-containing protein n=8 Tax=Fusarium TaxID=5506 RepID=C7YHL0_FUSV7)

HSP 1 Score: 53.9 bits (128), Expect = 3.740e-6
Identity = 27/70 (38.57%), Postives = 45/70 (64.29%), Query Frame = 0
Query:   12 KMVMSAYAYFQTEQYTNNKDDFIGLSVGKAGAEIARRWKSMGTRERARYQALHAEDRKRFEMESRARDAE 81
            K  +SAY +F  EQ  N +++  G+S G+ G  +  RWK++  ++RA Y+A  A D+KR+E E +A +A+
Sbjct:   25 KRGLSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALNEKQRAPYEAKAAADKKRYEDEKQAYNAD 94          
BLAST of mRNA_H-elongata_contig65545.14137.1 vs. uniprot
Match: NHP6_GIBZE (Non-histone chromosomal protein 6 n=13 Tax=Hypocreomycetidae TaxID=222543 RepID=NHP6_GIBZE)

HSP 1 Score: 53.9 bits (128), Expect = 3.740e-6
Identity = 27/70 (38.57%), Postives = 45/70 (64.29%), Query Frame = 0
Query:   12 KMVMSAYAYFQTEQYTNNKDDFIGLSVGKAGAEIARRWKSMGTRERARYQALHAEDRKRFEMESRARDAE 81
            K  +SAY +F  EQ  N +++  G+S G+ G  +  RWK++  ++RA Y+A  A D+KR+E E +A +A+
Sbjct:   25 KRGLSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALNEKQRAPYEAKAAADKKRYEDEKQAYNAD 94          
BLAST of mRNA_H-elongata_contig65545.14137.1 vs. uniprot
Match: W7LC01_GIBM7 (Structure-specific recognition protein 1 n=42 Tax=Fusarium TaxID=5506 RepID=W7LC01_GIBM7)

HSP 1 Score: 53.9 bits (128), Expect = 3.820e-6
Identity = 27/70 (38.57%), Postives = 45/70 (64.29%), Query Frame = 0
Query:   12 KMVMSAYAYFQTEQYTNNKDDFIGLSVGKAGAEIARRWKSMGTRERARYQALHAEDRKRFEMESRARDAE 81
            K  +SAY +F  EQ  N +++  G+S G+ G  +  RWK++  ++RA Y+A  A D+KR+E E +A +A+
Sbjct:   26 KRGLSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALNEKQRAPYEAKAAADKKRYEDEKQAYNAD 95          
BLAST of mRNA_H-elongata_contig65545.14137.1 vs. uniprot
Match: A0A8H4QBR4_9HYPO (Structure-specific recognition protein 1 n=1 Tax=Ophiocordyceps camponoti-floridani TaxID=2030778 RepID=A0A8H4QBR4_9HYPO)

HSP 1 Score: 55.1 bits (131), Expect = 3.880e-6
Identity = 28/70 (40.00%), Postives = 45/70 (64.29%), Query Frame = 0
Query:   12 KMVMSAYAYFQTEQYTNNKDDFIGLSVGKAGAEIARRWKSMGTRERARYQALHAEDRKRFEMESRARDAE 81
            K  +SAY +F  EQ  N +++  G+S G+ G  +  RWK++  ++RA Y+A  A D+KR+E E +A +AE
Sbjct:   77 KRGLSAYMFFANEQRENVREENPGISFGQVGKILGERWKALNEKQRAPYEAKAAADKKRYEDEKQAYNAE 146          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig65545.14137.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5A2_ECTSI1.700e-5460.31Probable chromatin remodelling complex ATPase chai... [more]
A0A1Y2X1X1_9PEZI4.830e-741.43HMG box domain-containing protein n=18 Tax=Fungi T... [more]
T5AGK8_OPHSC1.240e-640.00HMG box protein n=2 Tax=Ophiocordyceps sinensis Ta... [more]
A0A369H951_9HYPO1.360e-640.00HMG box domain-containing protein n=11 Tax=Hypocre... [more]
NHP6_NEUCR2.030e-640.00Non-histone chromosomal protein 6 n=6 Tax=Sordaria... [more]
A0A2C5YJL9_9HYPO3.570e-638.57HMG box domain-containing protein n=2 Tax=Ophiocor... [more]
C7YHL0_FUSV73.740e-638.57HMG box-containing protein n=8 Tax=Fusarium TaxID=... [more]
NHP6_GIBZE3.740e-638.57Non-histone chromosomal protein 6 n=13 Tax=Hypocre... [more]
W7LC01_GIBM73.820e-638.57Structure-specific recognition protein 1 n=42 Tax=... [more]
A0A8H4QBR4_9HYPO3.880e-640.00Structure-specific recognition protein 1 n=1 Tax=O... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 195..212
IPR009071High mobility group box domainSMARTSM00398hmgende2coord: 10..80
e-value: 3.6E-4
score: 29.9
IPR009071High mobility group box domainPFAMPF00505HMG_boxcoord: 15..77
e-value: 2.4E-6
score: 27.9
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 11..79
score: 9.278
IPR036910High mobility group box domain superfamilyGENE3D1.10.30.10coord: 3..99
e-value: 9.9E-12
score: 47.0
IPR036910High mobility group box domain superfamilySUPERFAMILY47095HMG-boxcoord: 13..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig65545contigH-elongata_contig65545:354..1707 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig65545.14137.1mRNA_H-elongata_contig65545.14137.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig65545 354..1845 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig65545.14137.1 ID=prot_H-elongata_contig65545.14137.1|Name=mRNA_H-elongata_contig65545.14137.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=212bp
MSGAGSNSAPVKMVMSAYAYFQTEQYTNNKDDFIGLSVGKAGAEIARRWK
SMGTRERARYQALHAEDRKRFEMESRARDAEIAAKQAAKRQARHADPASK
SYMRERALVRPGGPKRERRITMEEDMSPERLAARKKAKQQRDEQKAGRLA
REAESDRQKKSIAAAAAAMARKRIKYILRQSDIFATHFGVTLSESEDEED
EAQEEQAAAAGL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009071HMG_box_dom
IPR036910HMG_box_dom_sf