prot_H-elongata_contig65310.14119.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig65310.14119.1
Unique Nameprot_H-elongata_contig65310.14119.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length170
Homology
BLAST of mRNA_H-elongata_contig65310.14119.1 vs. uniprot
Match: A0A6H5KN26_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN26_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 5.120e-15
Identity = 51/174 (29.31%), Postives = 94/174 (54.02%), Query Frame = 0
Query:    2 NDAGESLSARTLYDRLYCYNEVIKQLKYQHGITK-----VSALAMHKAYSQVGTTTQSVQTLRSWKKALGGLSQEAFDAIRDVFQSEEKSVDANAISLSILTKQPFMNLKYTSACTQQGLVVHILARFKHVYRTAPKSEDLDG--IIKRASTGVVLVRSVERCIPRKEWTEAFQ 168
            NDA  + + RT+YDRLY ++ + K  +     ++     V+   + + Y++      S  TLRSW KA+ G+ +EA  A++D+ +SE+KS+D N ++L+ ++K  FM L    +  +QG  + ILAR+K   +      D+D   II +A        ++   +P ++W++  +
Sbjct:  108 NDATSTFAERTIYDRLYFFSSLYKGAQASLETSRSRSRQVNPKDIKEFYAKAKQAVPSDSTLRSWLKAVRGIKEEALTALKDLVESEDKSIDLNLVTLAYISKDDFMAL----SAEEQGFNLQILARWKKFQQGRAFKADIDTPPIIAQAKDVAQWYFALCGIVPYQDWSQELK 277          
BLAST of mRNA_H-elongata_contig65310.14119.1 vs. uniprot
Match: D8LJG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJG8_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 4.310e-10
Identity = 40/125 (32.00%), Postives = 69/125 (55.20%), Query Frame = 0
Query:   47 QVGTTTQSVQTLRSWKKALGGLSQEAFDAIRDVFQSEEKSVDANAISLSILTKQPFMNLKYTSACTQQGLVVHILARFKHVYRTAPKSEDLDG--IIKRASTGVVLVRSVERCIPRKEWTEAFQR 169
            Q      S  TLRSW KA+ G+ +EA  A++D+ +SE+KS+D N ++L+ ++K  FM L    +  +QG  + ILAR+K   +      D+D   II +A        ++   +P ++W++  +R
Sbjct:   19 QAKQAVPSDSTLRSWLKAVRGIKEEALTALKDLVESEDKSIDLNLVTLAYISKDDFMAL----SAEEQGFNLQILARWKKFQQGRAFKADVDTPPIIAQAKDVAQWYFALCGIVPYQDWSQELKR 139          
BLAST of mRNA_H-elongata_contig65310.14119.1 vs. uniprot
Match: A0A6H5JDB1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDB1_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 9.150e-5
Identity = 37/113 (32.74%), Postives = 60/113 (53.10%), Query Frame = 0
Query:   34 TKVSALAMHKAYSQVGTTTQSVQTLRSWKKALGGLSQEAFDAIRDVFQSEEKSVDANAISLSILTKQPFMNLKYTSACTQQGLVVHILARFKH--VYRTAPKSEDLDGIIKRA 144
            +KV+A  +  AY + G    S  +L S K+ +  L   AF A+++V +SEEK VD  ++S ++L     +   +     +Q L++HILARFK     +  P   DL  + +RA
Sbjct:  283 SKVTARMLSDAYKKSGDAPPSNPSLCSHKRLVIRLKGPAFAALKEVSESEEKGVDMQSLSKTLLDCDAVLKFPF-GRDFEQSLLIHILARFKSNDPGKKMPVKSDLPKLRQRA 394          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig65310.14119.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KN26_9PHAE5.120e-1529.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJG8_ECTSI4.310e-1032.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JDB1_9PHAE9.150e-532.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig65310contigH-elongata_contig65310:272..2829 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig65310.14119.1mRNA_H-elongata_contig65310.14119.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig65310 272..2829 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig65310.14119.1 ID=prot_H-elongata_contig65310.14119.1|Name=mRNA_H-elongata_contig65310.14119.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=170bp
FNDAGESLSARTLYDRLYCYNEVIKQLKYQHGITKVSALAMHKAYSQVGT
TTQSVQTLRSWKKALGGLSQEAFDAIRDVFQSEEKSVDANAISLSILTKQ
PFMNLKYTSACTQQGLVVHILARFKHVYRTAPKSEDLDGIIKRASTGVVL
VRSVERCIPRKEWTEAFQR*
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