prot_H-elongata_contig6528.14116.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig6528.14116.1
Unique Nameprot_H-elongata_contig6528.14116.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length148
Homology
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BLAST of mRNA_H-elongata_contig6528.14116.1 vs. uniprot
Match: D7G7E0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7E0_ECTSI)

HSP 1 Score: 165 bits (417), Expect = 1.490e-49
Identity = 86/146 (58.90%), Postives = 107/146 (73.29%), Query Frame = 0 
Query:    1 MSRPEAQAAAKTMYDQRVPEMNPDVLRQALELGPAQKTVVSRQKLVPDESELEVSKTPRPLPRNRSRVVSTANEVDETKGLLTQTQLAELLKRLVPPSGEAPSPELNKSVAGDFHVSEDSTALLARYYRAPDVRMSGDVMTARWKW 146
            MSRP+AQAAAK MYDQ+VP+MN D+LRQA+ +GP  K  ++ QKLVPD SE+  SKTPRPLP++R+R V+ + EVD  KGLLTQTQLA  L+R V     +P P     +  +FHVSE+  A+L RY RAPD+RM  DVMTARW W
Sbjct:    1 MSRPDAQAAAKKMYDQQVPDMNADILRQAMAMGPVGKAELTHQKLVPDASEMVTSKTPRPLPKDRTRAVAKSGEVDAKKGLLTQTQLAAFLERRVANGAGSPPPA---GLLEEFHVSEEDAAVLLRYCRAPDIRMYEDVMTARWHW 143
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6528.14116.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G7E0_ECTSI1.490e-4958.90Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6528contigH-elongata_contig6528:6427..7729 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6528.14116.1mRNA_H-elongata_contig6528.14116.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig6528 6145..7737 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig6528.14116.1 ID=prot_H-elongata_contig6528.14116.1|Name=mRNA_H-elongata_contig6528.14116.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=148bp
MSRPEAQAAAKTMYDQRVPEMNPDVLRQALELGPAQKTVVSRQKLVPDES
ELEVSKTPRPLPRNRSRVVSTANEVDETKGLLTQTQLAELLKRLVPPSGE
APSPELNKSVAGDFHVSEDSTALLARYYRAPDVRMSGDVMTARWKWR*
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