mRNA_H-elongata_contig65259.14114.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig65259.14114.1
Unique NamemRNA_H-elongata_contig65259.14114.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig65259.14114.1 vs. uniprot
Match: A0A6H5JXI4_9PHAE (FA_desaturase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JXI4_9PHAE)

HSP 1 Score: 472 bits (1215), Expect = 1.010e-163
Identity = 217/288 (75.35%), Postives = 251/288 (87.15%), Query Frame = 1
Query:    1 LGHDCGHSTFSIYPWVNAVCGHLCHAPLLVPFWPWAKSHNEHHXXXNHVEKDMSYPWFGTEQFEKEVDPFTKFWFKTPLFPLTAF-FTYLVMGWYDGSHFNPFSVLFWTRREQAQCAVSTTSVVIMAYVMTSCL-EFNWSAIVMRHVVPLLIMNYWLIMVTYLQHHEDDTNTFDDEDFHFATAAMETVDRSFGWGIDDAHHNITDCHVVHHLFFTKIPHYNLKKATAALRPYLEALGLYRYRKNPHFLWVFMRDSYRLGFHTHSKARDHRAKLHFKDSSRKPGAKKKA 858
            +GHDCGH+TFS YPWVNA+ GHLCHAPLLVPFWPWAKSHNEHH   NHVEKDMSYPWFG +QFE+EV PFTK + KTP  P T++ FTYL+ GWYDGSHFNPFSVLFW+R+EQ QCAVST SV+   Y++ S L +F+WSAIV+RH+VP++IMNYWL+MVTYLQHHE+DT TFD+ DFHFATAAMETVDR FGWGIDDAHHNITD HV HHLFFTKIPHYNL+KATAA+RP LE LGLYRYR NP+FLWVF R++Y+LGF+THSKA DHRAK+H+ D+SR P  K K+
Sbjct:   95 IGHDCGHTTFSNYPWVNALVGHLCHAPLLVPFWPWAKSHNEHHKYHNHVEKDMSYPWFGKQQFEQEVKPFTKLFLKTPFHPFTSYLFTYLLAGWYDGSHFNPFSVLFWSRKEQVQCAVSTASVLTFIYLLVSVLFDFDWSAIVVRHLVPVMIMNYWLVMVTYLQHHEEDTKTFDNSDFHFATAAMETVDRKFGWGIDDAHHNITDGHVAHHLFFTKIPHYNLQKATAAIRPSLEKLGLYRYRNNPNFLWVFARENYKLGFYTHSKAHDHRAKMHYLDASRTPAFKSKS 382          
BLAST of mRNA_H-elongata_contig65259.14114.1 vs. uniprot
Match: A0A835YPJ0_9STRA (Fatty acid desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPJ0_9STRA)

HSP 1 Score: 349 bits (896), Expect = 1.600e-115
Identity = 162/266 (60.90%), Postives = 203/266 (76.32%), Query Frame = 1
Query:    1 LGHDCGHSTFSIYPWVNAVCGHLCHAPLLVPFWPWAKSHNEHHXXXNHVEKDMSYPWFGTEQFEKEVDPFTKFWFKTPLFPLTAF-FTYLVMGWYDGSHFNPFSVLFWTRREQAQCAVSTTSVVI-MAYVMTSCLEFNWSAIVMRHVVPLLIMNYWLIMVTYLQHHEDDTNTFDDEDFHFATAAMETVDRSFGWGIDDAHHNITDCHVVHHLFFTKIPHYNLKKATAALRPYLEALGLYRYRKNPHFLWVFMRDSYRLGFHTHSKA 792
            +GHDCGH+TFS Y WVNAVCGHLCHAPLLVPFWPWA+SH++HH   NHVEKD S+PWF  EQ+  ++    +   KTPL PL ++  +YL  G++DGSHFNPF  LF  R ++ QCAVS+ +V + +   +   +E++WSA  +++  P  I NYWL+MVTYLQHHE D+ T+DD D+ FA AAMETVDR + WG+DD HHNITD HVVHHLFFTKIPHYNL KAT ALRPYLE LG+YRY++NP FLW F++ +Y+ G  THSKA
Sbjct:   96 VGHDCGHTTFSEYTWVNAVCGHLCHAPLLVPFWPWAQSHHQHHSYHNHVEKDHSFPWFRKEQYATQLSGVGRTILKTPLHPLFSYGVSYLFFGYWDGSHFNPFGSLFKNRTQRVQCAVSSLAVALFLGLFLHYVIEYSWSAFAVKYAAPWCIYNYWLVMVTYLQHHEPDSITYDDADYSFAVAAMETVDRKYCWGVDDLHHNITDGHVVHHLFFTKIPHYNLMKATDALRPYLEGLGVYRYQRNPLFLWTFVQYNYKYGLFTHSKA 361          
BLAST of mRNA_H-elongata_contig65259.14114.1 vs. uniprot
Match: A0A1S7C7R3_9STRA (Om n=1 Tax=Nannochloropsis oceanica TaxID=145522 RepID=A0A1S7C7R3_9STRA)

HSP 1 Score: 254 bits (649), Expect = 7.520e-78
Identity = 128/263 (48.67%), Postives = 173/263 (65.78%), Query Frame = 1
Query:    1 LGHDCGHSTFSIYPWVNAVCGHLCHAPLLVPFWPWAKSHNEHHXXXNHVEKDMSYPWFGTEQFEKEVDPFTKFWFKTPLFPLTAF-FTYLVMGWYDGSHFNPFSVLFWTRREQAQCAVSTTSVVIMAYVMTSCLEFNWSAIVMR----HVVPLLIMNYWLIMVTYLQHHEDDTNTFDDEDFHFATAAMETVDRSFGWGIDDAHHNITDCHVVHHLFFTKIPHYNLKKATAALRPYLEALGLYRYRKNPHFLWVFMRDSYRLGF 774
            +GHDCGH +FS Y W+N +CGH+CHAPL+VP+WPW KSH  HH   NH+ KDMS+PW   E FE ++ PF +   + PL     + F YL  G  DGSH  PFS LF   +E+ QCAVST  +V+   ++   LE      + R    +VVPLL+ N W+ MVTYLQHH++DT  + + ++++   A+ET+DR +G GIDD  HNITD HV HHLFFT+IPHY+L  ATAA+R  L+  G Y+ R++ +FL  F   +YRL +
Sbjct:   75 IGHDCGHGSFSEYKWLNDICGHICHAPLMVPYWPWQKSHRLHHMYHNHLTKDMSHPWMTKEVFE-DLTPFEQALLENPLSLFIKYTFLYLFAGKMDGSHVVPFSPLFTDTKERVQCAVSTLGMVVAGALVYIGLEGGKEGGMARIGSIYVVPLLVFNAWITMVTYLQHHDEDTKVYAEGEWNYIKGALETIDREYGMGIDDLSHNITDGHVAHHLFFTQIPHYHLTAATAAVRQCLQPTGTYKKRRSWNFLARFTELNYRLKY 336          
BLAST of mRNA_H-elongata_contig65259.14114.1 vs. uniprot
Match: A0A7S4PZI0_9DINO (Hypothetical protein n=2 Tax=Sar TaxID=2698737 RepID=A0A7S4PZI0_9DINO)

HSP 1 Score: 249 bits (637), Expect = 2.360e-76
Identity = 118/255 (46.27%), Postives = 177/255 (69.41%), Query Frame = 1
Query:    1 LGHDCGHSTFSIYPWVNAVCGHLCHAPLLVPFWPWAKSHNEHHXXXNHVEKDMSYPWFGTEQFEKEVDPFTKFWFKTPLFPLTAF-FTYLVMGWYDGSHFNPFSVLFWTRREQAQCAVSTTSVVIMAYVMTSCLEFNWSAIVMRHVVPLLIMNYWLIMVTYLQHHEDDTNTFDDEDFHFATAAMETVDRSFGWGIDDAHHNITDCHVVHHLFFTKIPHYNLKKATAALRPYLEALG--LYRYRKNPHFLWVFMRD 756
            +GHDCGH++FS Y W+N +CGH+CHAPL+VP+WPW +SH+ HH   NH +KD S+PW   + +  +++       + PLF    + + YL+ G  DGSHF+PFS LF T +++ QCAVS+ SVV  +  M    + +W      +  PL   N WL++VTYLQHH+D+T  +D+ ++++   A ETVDR++G+GIDD HHNITD HV+HH+FFT+IPHY+LK+ATAA+ P ++  G  LY+++++  FL+ + R+
Sbjct:  112 VGHDCGHTSFSNYGWLNDLCGHICHAPLMVPYWPWRRSHHLHHSYHNHTDKDKSHPWMRQQDWA-QLNAIQAAGMECPLFAFVGYTWIYLLAGICDGSHFSPFSKLFETTQQRVQCAVSSLSVVAFSVGMYFYFD-SWGQWFSMYFGPLCFFNMWLVLVTYLQHHDDETLAYDEGEWNYLRGAFETVDRTYGFGIDDIHHNITDGHVLHHIFFTQIPHYHLKEATAAIVPVIQKYGKGLYKHQESRDFLYKYSRN 364          
BLAST of mRNA_H-elongata_contig65259.14114.1 vs. uniprot
Match: I2CR09_NANGC (Glycerolipid omega-3 fatty acid desaturase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR09_NANGC)

HSP 1 Score: 246 bits (627), Expect = 5.300e-74
Identity = 124/263 (47.15%), Postives = 170/263 (64.64%), Query Frame = 1
Query:    1 LGHDCGHSTFSIYPWVNAVCGHLCHAPLLVPFWPWAKSHNEHHXXXNHVEKDMSYPWFGTEQFEKEVDPFTKFWFKTPLFPLTAF-FTYLVMGWYDGSHFNPFSVLFWTRREQAQCAVSTTSVVIMAYVMTSCLEFNWSAIVMR----HVVPLLIMNYWLIMVTYLQHHEDDTNTFDDEDFHFATAAMETVDRSFGWGIDDAHHNITDCHVVHHLFFTKIPHYNLKKATAALRPYLEALGLYRYRKNPHFLWVFMRDSYRLGF 774
            +GHDCGH +FS Y W N VCGH+CHAPL+VP+WPW KSH  HH   NH+ KDMS+PW   E FE ++ PF +   + PL     + F YL  G  DGSH  P S LF   +E+ QCAVST  +++   ++   LE      + R    +++PLL+ N W+ MVTYLQHH++DT  + + ++ +   A+ET+DR +G GIDD  HNITD HV HHLFFT+IPHY+LK ATAA+R  L   G Y+ +++ +FL  F   +Y+L +
Sbjct:  125 IGHDCGHGSFSEYKWFNDVCGHICHAPLMVPYWPWQKSHRLHHMYHNHLTKDMSHPWMTQEIFE-DLTPFEQALLENPLSLFIKYTFLYLFAGKLDGSHVLPTSPLFSDTKERIQCAVSTLCMLVAGVLIYVGLEGGAEGGLARIGSMYLIPLLVFNAWITMVTYLQHHDEDTKVYAEGEWSYIKGALETIDREYGMGIDDLSHNITDGHVAHHLFFTQIPHYHLKDATAAVRQLLTPTGTYKKKQSWNFLGKFTELNYKLKY 386          
BLAST of mRNA_H-elongata_contig65259.14114.1 vs. uniprot
Match: A0A4U8UWN0_STECR (FA_desaturase domain-containing protein n=2 Tax=Steinernema carpocapsae TaxID=34508 RepID=A0A4U8UWN0_STECR)

HSP 1 Score: 237 bits (605), Expect = 4.870e-71
Identity = 122/263 (46.39%), Postives = 161/263 (61.22%), Query Frame = 1
Query:    1 LGHDCGHSTFSIYPWVNAVCGHLCHAPLLVPFWPWAKSHNEHHXXXNHVEKDMSYPWFGTEQFEKEVDPFTKFWFKTPLF--PLTAFFTYLVM---GWYDGSHFNPFSVLFWTRREQAQCAVSTTSVVIMAYVMTSCLEFNWSAIVMRHVVPLLIMNYWLIMVTYLQHHEDDTNTFDDEDFHFATAAMETVDRSFGWGIDDAHHNITDCHVVHHLFFTKIPHYNLKKATAALRPYLEALGLYRYRKNPHFLWVFMRDSYRLGF 774
            +GHDCGH TFS Y WVN +CGH+ HAP+L P+WPW KSH +HH    H+ KD  +PW   + FEK        W +      P++AFF ++V    G  DGSHF P S LF +  E+ QC +S  +  + AYV  +   ++W      ++VP+L   +WL MVTYLQH  DD N ++D  + +    M+T+DR +G+GID   H+ITD HV HHLFFTKIPHYNL KAT ALR  LE  G+YR R +  FL  F R + RL +
Sbjct:  155 VGHDCGHGTFSNYTWVNDICGHIAHAPILAPYWPWQKSHRQHHTYTGHLTKDRGHPWITEKVFEKWG------WSEKQYANNPVSAFFRWVVYTFGGVTDGSHFWPGSSLFNSTTERIQCFISGLACALCAYVAFAFCSYDWLTYGKFYIVPVLCQGFWLTMVTYLQHQSDDINVYEDGTWGYVRGQMQTIDRPYGFGIDQLMHHITDGHVAHHLFFTKIPHYNLMKATKALRDKLEPFGVYRRRVSYDFLLEFCRLNMRLEY 411          
BLAST of mRNA_H-elongata_contig65259.14114.1 vs. uniprot
Match: A0A0N5D9B4_THECL (FA_desaturase domain-containing protein n=1 Tax=Thelazia callipaeda TaxID=103827 RepID=A0A0N5D9B4_THECL)

HSP 1 Score: 229 bits (585), Expect = 8.440e-69
Identity = 110/254 (43.31%), Postives = 156/254 (61.42%), Query Frame = 1
Query:    1 LGHDCGHSTFSIYPWVNAVCGHLCHAPLLVPFWPWAKSHNEHHXXXNHVEKDMSYPWFGTEQFEKEVDPFTKFWFKTPLFPLTAFFT----YLVMGWYDGSHFNPFSVLFWTRREQAQCAVSTTSVVIMAYVMTSCLEFNWSAIVMRHVVPLLIMNYWLIMVTYLQHHEDDTNTFDDEDFHFATAAMETVDRSFGWGIDDAHHNITDCHVVHHLFFTKIPHYNLKKATAALRPYLEALGLYRYRKNPHFLWVFM 750
            +GHDCGH TFS Y W+N + GH+ HAPLL P+WPW KSH +HH   +H++ DM +PW   E F +    F  F      FPL+ F      Y V+G  DGSHF P+S LF   RE+ QC +S  S ++ A       +++W   +  + + LL   YWL+++TYLQH++     +++  + +    ++T+DR +G+GID A H+ITD HV HH FFTKIPHY+L KATAA++  LE  G YR + N  FLW ++
Sbjct:   93 VGHDCGHGTFSEYTWINDLFGHIAHAPLLAPYWPWKKSHRQHHQYTSHIDNDMGHPWILEEDFLRRGWIFRHF----SKFPLSGFIRWNPIYTVVGLPDGSHFWPYSKLFNNNRERVQCLISGLSCLLCAVGAFVICDYSWFLFIKYYYISLLFQGYWLVIITYLQHNDYSIEVYEEGYWSYVMGQVQTIDRVYGFGIDVAMHHITDGHVAHHFFFTKIPHYHLMKATAAIKKVLEPYGAYRCKSNYDFLWEYL 342          
BLAST of mRNA_H-elongata_contig65259.14114.1 vs. uniprot
Match: A0A1I8CT62_9BILA (FA_desaturase domain-containing protein n=1 Tax=Rhabditophanes sp. KR3021 TaxID=114890 RepID=A0A1I8CT62_9BILA)

HSP 1 Score: 228 bits (580), Expect = 5.740e-68
Identity = 108/250 (43.20%), Postives = 158/250 (63.20%), Query Frame = 1
Query:    1 LGHDCGHSTFSIYPWVNAVCGHLCHAPLLVPFWPWAKSHNEHHXXXNHVEKDMSYPWFGTEQFEKEVDPFTKFWFKTPLFPLTAFFTYLVMGWYDGSHFNPFSVLFWTRREQAQCAVSTTSVVIMAYVMTSCLEFNWSAIVMRHVVPLLIMNYWLIMVTYLQHHEDDTNTFDDEDFHFATAAMETVDRSFGWGIDDAHHNITDCHVVHHLFFTKIPHYNLKKATAALRPYLEAL-GLYRYRKNPHFLWVF 747
            +GHDCGH TFS Y W+N +CGH+ HAP++ P+WPW KSH +HH   +H+EKD  + W     FE  +D  ++ + K P   L  +  Y  +G  DGSHF P S LF    E+ QCAVS  +V    +     ++++  A +  + +P     YWL++VTYLQH +++   +++  +++    ++T+DR +G+GID   H+ITDCHVVHHLFFTKIPHY+LK+AT A++P LE   G Y+Y  N  FLW +
Sbjct:   95 VGHDCGHGTFSNYTWLNDICGHIAHAPIMAPYWPWQKSHRQHHTYTSHLEKDRGHVWITENHFEG-LDVISQNYVKFPPTGLLLWHMYTFLGIPDGSHFWPGSRLFTNTTERIQCAVSALAVAASCFAALYFVDYSVYAWLKYYYLPCCFAGYWLVIVTYLQHRDEEMEIYEEGTWNYVKGQVQTIDRWYGFGIDYLMHHITDCHVVHHLFFTKIPHYHLKEATKAIKPVLEKYEGAYKYHINYQFLWEY 343          
BLAST of mRNA_H-elongata_contig65259.14114.1 vs. uniprot
Match: A0A811KVY1_9BILA (Hypothetical protein n=1 Tax=Bursaphelenchus okinawaensis TaxID=465554 RepID=A0A811KVY1_9BILA)

HSP 1 Score: 228 bits (580), Expect = 7.180e-68
Identity = 114/263 (43.35%), Postives = 168/263 (63.88%), Query Frame = 1
Query:    1 LGHDCGHSTFSIYPWVNAVCGHLCHAPLLVPFWPWAKSHNEHHXXXNHVEKDMSYPWFGTEQFEKEVDPFTKFWFKTPLFPLTAF----FTYLVMGWYDGSHFNPFSVLFWTRREQAQCAVSTTSVVIMAYVMTSCLEFNWSAIVMRHVVPLLIMNYWLIMVTYLQHHEDDTNTFDDEDFHFATAAMETVDRSFGWGIDDAHHNITDCHVVHHLFFTKIPHYNLKKATAALRPYLEAL-GLYRYRKNPHFLWVFMRDSYRLGF 774
            +GHDCGH TFS Y W+N + GH+ HAP+L P+WPW KSH +HH   +H+EKD  +PW+  E++ +E     +F FK   FPL+AF    F YL +G  DGSH+ P+S LF T  ++ +CAVST+  +  AYV     ++++S  V  ++ P+L    WL+MVTYLQH +++   ++D ++ F     +T+DR++G  ID   H+ITD HV HHLFFTKIPHY+L +AT  ++   +   GLY+ + N   L  F+R + RL +
Sbjct:  102 VGHDCGHGTFSEYTWLNDIIGHVAHAPILAPYWPWQKSHRQHHQYTSHLEKDKGHPWYTQEEYVQEPWVIQQF-FK---FPLSAFVRWNFVYLTLGLPDGSHYWPYSKLFKTTEDRVKCAVSTSLCIASAYVAFVICDYSFSTYVKYYLAPVLFQGLWLVMVTYLQHQDEEIEVYEDAEWSFVRGQTQTIDRTYGMFIDTLMHHITDGHVAHHLFFTKIPHYHLIEATEGIKKVFKKYPGLYKKQNNFLTLLEFLRLNVRLDY 360          
BLAST of mRNA_H-elongata_contig65259.14114.1 vs. uniprot
Match: A0A1I7Y654_9BILA (FA_desaturase domain-containing protein n=1 Tax=Steinernema glaseri TaxID=37863 RepID=A0A1I7Y654_9BILA)

HSP 1 Score: 228 bits (582), Expect = 8.410e-67
Identity = 117/258 (45.35%), Postives = 156/258 (60.47%), Query Frame = 1
Query:    1 LGHDCGHSTFSIYPWVNAVCGHLCHAPLLVPFWPWAKSHNEHHXXXNHVEKDMSYPWFGTEQFEKEVDPFTKFWFKTPLFPLTAFFTYLVMGWYDGSHFNPFSVLFWTRREQAQCAVSTTSVVIMAYVMTSCLEFNWSAIVMRHVVPLLIMNYWLIMVTYLQHHEDDTNTFDDEDFHFATAAMETVDRSFGWGIDDAHHNITDCHVVHHLFFTKIPHYNLKKATAALRPYLEALGLYRYRKNPHFLWVFMRDSYRLGF 774
            +GHDCGH TFS Y WVN +CGH+ HAP+L P+WPW KSH +HH    H+ KD  +PW  TE+   E     K +   P+  +  +  Y V G  DGSHF P S LF    E+ +C VS  +    AYV      ++       +V+P+L   +WL MVTYLQH  DD N +++  + +    M+TVDR +G+GID   H+ITD HV HHLFFTKIPHY+L KAT A+R  LE  G+YR+R +  FL+ F R + RL +
Sbjct:  230 VGHDCGHGTFSNYTWVNDICGHIAHAPILAPYWPWQKSHRQHHTYTGHLTKDRGHPWI-TEEVYSEWGWGQKQYANNPVTAIIRWVMYTVGGVTDGSHFWPTSSLFTNTVERVKCVVSGLACAFCAYVAFVLCGYDLYTYGKFYVLPVLSQGFWLTMVTYLQHQTDDINVYEEGTWGYVRGQMQTVDRPYGFGIDQLMHHITDGHVAHHLFFTKIPHYHLMKATEAIRSKLEPYGVYRHRVSYDFLFEFCRLNMRLEY 486          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig65259.14114.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JXI4_9PHAE1.010e-16375.35FA_desaturase domain-containing protein n=2 Tax=Ec... [more]
A0A835YPJ0_9STRA1.600e-11560.90Fatty acid desaturase n=1 Tax=Tribonema minus TaxI... [more]
A0A1S7C7R3_9STRA7.520e-7848.67Om n=1 Tax=Nannochloropsis oceanica TaxID=145522 R... [more]
A0A7S4PZI0_9DINO2.360e-7646.27Hypothetical protein n=2 Tax=Sar TaxID=2698737 Rep... [more]
I2CR09_NANGC5.300e-7447.15Glycerolipid omega-3 fatty acid desaturase (Fragme... [more]
A0A4U8UWN0_STECR4.870e-7146.39FA_desaturase domain-containing protein n=2 Tax=St... [more]
A0A0N5D9B4_THECL8.440e-6943.31FA_desaturase domain-containing protein n=1 Tax=Th... [more]
A0A1I8CT62_9BILA5.740e-6843.20FA_desaturase domain-containing protein n=1 Tax=Rh... [more]
A0A811KVY1_9BILA7.180e-6843.35Hypothetical protein n=1 Tax=Bursaphelenchus okina... [more]
A0A1I7Y654_9BILA8.410e-6745.35FA_desaturase domain-containing protein n=1 Tax=St... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig65259contigH-elongata_contig65259:296..2556 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score369.8
Seed ortholog evalue9.6e-100
Seed eggNOG ortholog2880.D7FSC6
Preferred nameFAD2
KEGG rclassRC00917
KEGG koko:K10256,ko:K10257,ko:K21704,ko:K21710,ko:K21736
KEGG ReactionR11043,R11044
KEGG Pathwayko01040,ko01212,map01040,map01212
GOsGO:0000003,GO:0002376,GO:0003674,GO:0003824,GO:0004497,GO:0004768,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006636,GO:0006950,GO:0006952,GO:0006955,GO:0007275,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016053,GO:0016215,GO:0016491,GO:0016705,GO:0016709,GO:0016717,GO:0016720,GO:0019752,GO:0030176,GO:0030497,GO:0031224,GO:0031227,GO:0031984,GO:0032501,GO:0032502,GO:0032787,GO:0033559,GO:0040002,GO:0040012,GO:0040017,GO:0042175,GO:0042335,GO:0042389,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045087,GO:0045485,GO:0046394,GO:0048518,GO:0048856,GO:0050183,GO:0050789,GO:0050896,GO:0055114,GO:0065007,GO:0071704,GO:0072330,GO:0098827,GO:1901576
EggNOG free text desc.oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
EggNOG OGs2QQNB@2759,COG3239@1
Ec32 ortholog descriptionFatty acid desaturase
Ec32 orthologEc-20_005010.1
EC1.14.18.4,1.14.19.16,1.14.19.22,1.14.19.25,1.14.19.33,1.14.19.34,1.14.19.35,1.14.19.36,1.14.19.6
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01004
Hectar predicted targeting categoryother localisation
Exons4
Model size1117
Cds size708
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig65259.14114.1prot_H-elongata_contig65259.14114.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig65259 452..2303 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931039.756922-UTR-H-elongata_contig65259:295..4511622931039.756922-UTR-H-elongata_contig65259:295..451Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig65259 296..451 +
1691679673.0174806-UTR-H-elongata_contig65259:295..4511691679673.0174806-UTR-H-elongata_contig65259:295..451Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig65259 296..451 +
1622931039.8339326-UTR-H-elongata_contig65259:2303..25561622931039.8339326-UTR-H-elongata_contig65259:2303..2556Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig65259 2304..2556 +
1691679673.0923228-UTR-H-elongata_contig65259:2303..25561691679673.0923228-UTR-H-elongata_contig65259:2303..2556Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig65259 2304..2556 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931039.7699733-CDS-H-elongata_contig65259:451..6021622931039.7699733-CDS-H-elongata_contig65259:451..602Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig65259 452..602 +
1691679673.030991-CDS-H-elongata_contig65259:451..6021691679673.030991-CDS-H-elongata_contig65259:451..602Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig65259 452..602 +
1622931039.7867832-CDS-H-elongata_contig65259:1099..12991622931039.7867832-CDS-H-elongata_contig65259:1099..1299Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig65259 1100..1299 +
1691679673.0433567-CDS-H-elongata_contig65259:1099..12991691679673.0433567-CDS-H-elongata_contig65259:1099..1299Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig65259 1100..1299 +
1622931039.805896-CDS-H-elongata_contig65259:1605..18111622931039.805896-CDS-H-elongata_contig65259:1605..1811Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig65259 1606..1811 +
1691679673.0622675-CDS-H-elongata_contig65259:1605..18111691679673.0622675-CDS-H-elongata_contig65259:1605..1811Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig65259 1606..1811 +
1622931039.8200123-CDS-H-elongata_contig65259:2152..23031622931039.8200123-CDS-H-elongata_contig65259:2152..2303Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig65259 2153..2303 +
1691679673.0772283-CDS-H-elongata_contig65259:2152..23031691679673.0772283-CDS-H-elongata_contig65259:2152..2303Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig65259 2153..2303 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig65259.14114.1

>prot_H-elongata_contig65259.14114.1 ID=prot_H-elongata_contig65259.14114.1|Name=mRNA_H-elongata_contig65259.14114.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=236bp
MSYPWFGTEQFEKEVDPFTKFWFKTPLFPLTAFFTYLVMGWYDGSHFNPF
SVLFWTRREQAQCAVSTTSVVIMAYVMTSCLEFNWSAIVMRHVVPLLIMN
YWLIMVTYLQHHEDDTNTFDDEDFHFATAAMETVDRSFGWGIDDAHHNIT
DCHVVHHLFFTKIPHYNLKKATAALRPYLEALGLYRYRKNPHFLWVFMRD
SYRLGFHTHSKARDHRAKLHFKDSSRKPGAKKKAL*
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mRNA from alignment at H-elongata_contig65259:296..2556+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig65259.14114.1 ID=mRNA_H-elongata_contig65259.14114.1|Name=mRNA_H-elongata_contig65259.14114.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2261bp|location=Sequence derived from alignment at H-elongata_contig65259:296..2556+ (Himanthalia elongata Himel1 dioecious)
CTAGGGCACGATTGCGGGCACTCGACCTTCAGCATCTACCCGTGGGTGAA CGCGGTATGCGGCCACCTGTGCCACGCCCCGCTCCTGGTGCCGTTCTGGC CATGGGCCAAGAGCCACAACGAGCACCACAAGCACCACAACCACGTGGAG AAGGACATGTCGTACCCGTGGTTCGGCACGGAGCAGTTCGAGAAGGAGGT GGATCCCTTCACCAAGTTCTGGTTCAAGACCCCTCTATTTCCTCTCACGG CCTTCTTCACCTACCTCGTCATGGGCTGGTACGACGGCTCACACTTCAAC CCCTTCAGTGAGCCAAGATGAATACGTTAAGCGTGTGTGTGTGTGTATTT ATTGAATTGTACATAACCGCGCAATCCGGCGCTGTCGTCCTAGTCATTCT ATGCCACTCGTATTGATCCTCTTAGGGGGGGATCAATGTGTGTGTGTGTG TGTGTGTGTATGTGTTCAGCCACGCTAATATAGTCATCGCTTGCGTCGGT TCATTGATAGAATCGTGCGGCGTCGTCGCGATGGAAGACCAACTGGAAGA CCGGAGCGGAAATCGCTTTGAGACTCCCCACCAAGCCCCGCTTGTGTCGT GTGGTTGACAATATTAGTCGAACGAAGCGACAAAAGTATGCACGCCCATT TTATTTTCTGATCATTTGTTGAACGCTCTTGTAGGTTATGGCTGGCCTTC TACGCGCGTAGTCGTATTTTCCGTCCAACGTTTCCCCTGTCCCCCCCCCC CCCCTCCGAAACCTCATATGTTGCTATCCCACCGCGCGTGTTTCCATCCT CTAGGTGTCCTTTTCTGGACGCGTCGGGAGCAAGCGCAGTGCGCGGTATC GACGACTTCGGTCGTGATAATGGCGTACGTGATGACATCATGCTTGGAGT TTAACTGGTCGGCGATCGTCATGCGCCATGTAGTGCCGCTCTTGATAATG AACTACTGGCTGATTATGGTGACCTACCTACAGCACCACGAGGACGACAC TAATGTGGGTAAAGGACAAGAGAAAGTAAAGGAAATTAAATGCCGTGCGG CCGTGACGCAGTGCCCCCAGGAAGCGCACCTGACCTTCCTGGAACGTTAA ATCATTTCTCCGTGAACGAGCGACTTCCTCGCTACTTCACCTCCACCCCC TGTACCCGTGCGCGCCTCGTTCTCTCCCTATCATTCCCCTCTCCGGGGCG TTAAACGCTCTTTCTTGTCGATGTTGCCTAATGTGATTTACCATGTGCGA TCGGTCTGTGGGGTGTATGCGCCGCCGGCTTCATCTGACGCTTCCCGCAT CCGAAAAAAGACGTTTGATGACGAAGACTTCCATTTCGCCACCGCGGCTA TGGAAACGGTGGATCGGTCCTTCGGCTGGGGCATCGACGACGCGCACCAC AACATCACCGACTGTCACGTGGTACACCACCTCTTCTTCACCAAGATCCC CCACTACAATCTCAAGAAAGCGACCGCCGCCCTGCGTCCGTATCTTGAGG CACTCGGCTTGTACCGGTACGTCCGGCTTAGAGCCAATGGCTGTCTCGAA TCTAGAATCTAAAAGACGTCTTGTAGCACACGGCGTTATAGACGTTTGTA TGACAAACGCTAAAACCATACCCTTATACATAGACTCTGCCGCCCTGACA GCACATCACCATACCTTACATGGGAGGGGACGGGGGGGGCTAAAAAATAA AGCCTAGACGAACTCTAGATTCCGTCGAAATCACTGGTCGTATCCAGCCT GCTTCTTCCAGCCCATTGACTTGTATTATCTACCCTTTTGGTCGACGCCC TTCGTTCACCGTGCCGTGAAAACTCATCGCCATGTCTCCGCCCCCCCACT TTTGCAGATACCGCAAAAACCCCCACTTCCTGTGGGTGTTCATGAGGGAT AGCTACAGGCTTGGCTTCCACACGCACTCGAAGGCTCGCGACCATCGCGC AAAGCTGCACTTCAAGGACTCTTCAAGAAAACCTGGCGCCAAGAAGAAGG CCCTCTGATTTAGAACACCACAAACGAACCAACGAACGAACGAGTATATC CTGCCGCCAGCGGCCAAAAAATCGCGCGTATCGCACCGCCCACAACAGCG CGTTTTTCCTCGAGGGGCGGGGGACCCCTATCCCTCCCTAGGGCAAGCGG GGGAAGTTTGTACGTATACTACAATGGTATCCTCCTCTTCCCCGGTCCCT CCACCTCTCTCGGTGGTATATTTTGGGGTGGTTAGAGGCGTAGAAGGCGT TTGAGCTTGCA
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Coding sequence (CDS) from alignment at H-elongata_contig65259:296..2556+

>mRNA_H-elongata_contig65259.14114.1 ID=mRNA_H-elongata_contig65259.14114.1|Name=mRNA_H-elongata_contig65259.14114.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1416bp|location=Sequence derived from alignment at H-elongata_contig65259:296..2556+ (Himanthalia elongata Himel1 dioecious)
ATGTCGTACCCGTGGTTCGGCACGGAGCAGTTCGAGAAGGAGGTGGATCC
CTTCACCAAGTTCTGGTTCAAGACCCCTCTATTTCCTCTCACGGCCTTCT
TCACCTACCTCGTCATGGGCTGGTACGACGGCTCACACTTCAACCCCTTC
AATGTCGTACCCGTGGTTCGGCACGGAGCAGTTCGAGAAGGAGGTGGATC
CCTTCACCAAGTTCTGGTTCAAGACCCCTCTATTTCCTCTCACGGCCTTC
TTCACCTACCTCGTCATGGGCTGGTACGACGGCTCACACTTCAACCCCTT
CAGTGTCCTTTTCTGGACGCGTCGGGAGCAAGCGCAGTGCGCGGTATCGA
CGACTTCGGTCGTGATAATGGCGTACGTGATGACATCATGCTTGGAGTTT
AACTGGTCGGCGATCGTCATGCGCCATGTAGTGCCGCTCTTGATAATGAA
CTACTGGCTGATTATGGTGACCTACCTACAGCACCACGAGGACGACACTA
ATGTGTCCTTTTCTGGACGCGTCGGGAGCAAGCGCAGTGCGCGGTATCGA
CGACTTCGGTCGTGATAATGGCGTACGTGATGACATCATGCTTGGAGTTT
AACTGGTCGGCGATCGTCATGCGCCATGTAGTGCCGCTCTTGATAATGAA
CTACTGGCTGATTATGGTGACCTACCTACAGCACCACGAGGACGACACTA
ATACGTTTGATGACGAAGACTTCCATTTCGCCACCGCGGCTATGGAAACG
GTGGATCGGTCCTTCGGCTGGGGCATCGACGACGCGCACCACAACATCAC
CGACTGTCACGTGGTACACCACCTCTTCTTCACCAAGATCCCCCACTACA
ATCTCAAGAAAGCGACCGCCGCCCTGCGTCCGTATCTTGAGGCACTCGGC
TTGTACCGACGTTTGATGACGAAGACTTCCATTTCGCCACCGCGGCTATG
GAAACGGTGGATCGGTCCTTCGGCTGGGGCATCGACGACGCGCACCACAA
CATCACCGACTGTCACGTGGTACACCACCTCTTCTTCACCAAGATCCCCC
ACTACAATCTCAAGAAAGCGACCGCCGCCCTGCGTCCGTATCTTGAGGCA
CTCGGCTTGTACCGATACCGCAAAAACCCCCACTTCCTGTGGGTGTTCAT
GAGGGATAGCTACAGGCTTGGCTTCCACACGCACTCGAAGGCTCGCGACC
ATCGCGCAAAGCTGCACTTCAAGGACTCTTCAAGAAAACCTGGCGCCAAG
AAGAAGGCCCTCTGAATACCGCAAAAACCCCCACTTCCTGTGGGTGTTCA
TGAGGGATAGCTACAGGCTTGGCTTCCACACGCACTCGAAGGCTCGCGAC
CATCGCGCAAAGCTGCACTTCAAGGACTCTTCAAGAAAACCTGGCGCCAA
GAAGAAGGCCCTCTGA
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