prot_H-elongata_contig65259.14114.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig65259.14114.1
Unique Nameprot_H-elongata_contig65259.14114.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length236
Homology
BLAST of mRNA_H-elongata_contig65259.14114.1 vs. uniprot
Match: A0A6H5JXI4_9PHAE (FA_desaturase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JXI4_9PHAE)

HSP 1 Score: 367 bits (941), Expect = 2.140e-124
Identity = 173/236 (73.31%), Postives = 204/236 (86.44%), Query Frame = 0
Query:    1 MSYPWFGTEQFEKEVDPFTKFWFKTPLFPLTAF-FTYLVMGWYDGSHFNPFSVLFWTRREQAQCAVSTTSVVIMAYVMTSCL-EFNWSAIVMRHVVPLLIMNYWLIMVTYLQHHEDDTNTFDDEDFHFATAAMETVDRSFGWGIDDAHHNITDCHVVHHLFFTKIPHYNLKKATAALRPYLEALGLYRYRKNPHFLWVFMRDSYRLGFHTHSKARDHRAKLHFKDSSRKPGAKKKA 234
            MSYPWFG +QFE+EV PFTK + KTP  P T++ FTYL+ GWYDGSHFNPFSVLFW+R+EQ QCAVST SV+   Y++ S L +F+WSAIV+RH+VP++IMNYWL+MVTYLQHHE+DT TFD+ DFHFATAAMETVDR FGWGIDDAHHNITD HV HHLFFTKIPHYNL+KATAA+RP LE LGLYRYR NP+FLWVF R++Y+LGF+THSKA DHRAK+H+ D+SR P  K K+
Sbjct:  147 MSYPWFGKQQFEQEVKPFTKLFLKTPFHPFTSYLFTYLLAGWYDGSHFNPFSVLFWSRKEQVQCAVSTASVLTFIYLLVSVLFDFDWSAIVVRHLVPVMIMNYWLVMVTYLQHHEEDTKTFDNSDFHFATAAMETVDRKFGWGIDDAHHNITDGHVAHHLFFTKIPHYNLQKATAAIRPSLEKLGLYRYRNNPNFLWVFARENYKLGFYTHSKAHDHRAKMHYLDASRTPAFKSKS 382          
BLAST of mRNA_H-elongata_contig65259.14114.1 vs. uniprot
Match: A0A835YPJ0_9STRA (Fatty acid desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPJ0_9STRA)

HSP 1 Score: 247 bits (631), Expect = 1.240e-77
Identity = 120/213 (56.34%), Postives = 156/213 (73.24%), Query Frame = 0
Query:    2 SYPWFGTEQFEKEVDPFTKFWFKTPLFPLTAF-FTYLVMGWYDGSHFNPFSVLFWTRREQAQCAVSTTSVVI-MAYVMTSCLEFNWSAIVMRHVVPLLIMNYWLIMVTYLQHHEDDTNTFDDEDFHFATAAMETVDRSFGWGIDDAHHNITDCHVVHHLFFTKIPHYNLKKATAALRPYLEALGLYRYRKNPHFLWVFMRDSYRLGFHTHSKA 212
            S+PWF  EQ+  ++    +   KTPL PL ++  +YL  G++DGSHFNPF  LF  R ++ QCAVS+ +V + +   +   +E++WSA  +++  P  I NYWL+MVTYLQHHE D+ T+DD D+ FA AAMETVDR + WG+DD HHNITD HVVHHLFFTKIPHYNL KAT ALRPYLE LG+YRY++NP FLW F++ +Y+ G  THSKA
Sbjct:  149 SFPWFRKEQYATQLSGVGRTILKTPLHPLFSYGVSYLFFGYWDGSHFNPFGSLFKNRTQRVQCAVSSLAVALFLGLFLHYVIEYSWSAFAVKYAAPWCIYNYWLVMVTYLQHHEPDSITYDDADYSFAVAAMETVDRKYCWGVDDLHHNITDGHVVHHLFFTKIPHYNLMKATDALRPYLEGLGVYRYQRNPLFLWTFVQYNYKYGLFTHSKA 361          
BLAST of mRNA_H-elongata_contig65259.14114.1 vs. uniprot
Match: A0A1S7C7R3_9STRA (Om n=1 Tax=Nannochloropsis oceanica TaxID=145522 RepID=A0A1S7C7R3_9STRA)

HSP 1 Score: 166 bits (419), Expect = 1.470e-45
Identity = 95/211 (45.02%), Postives = 132/211 (62.56%), Query Frame = 0
Query:    1 MSYPWFGTEQFEKEVDPFTKFWFKTPLFPLTAF-FTYLVMGWYDGSHFNPFSVLFWTRREQAQCAVSTTSVVIMAYVMTSCLEFNWSAIVMR----HVVPLLIMNYWLIMVTYLQHHEDDTNTFDDEDFHFATAAMETVDRSFGWGIDDAHHNITDCHVVHHLFFTKIPHYNLKKATAALRPYLEALGLYRYRKNPHFLWVFMRDSYRLGF 206
            MS+PW   E FE ++ PF +   + PL     + F YL  G  DGSH  PFS LF   +E+ QCAVST  +V+   ++   LE      + R    +VVPLL+ N W+ MVTYLQHH++DT  + + ++++   A+ET+DR +G GIDD  HNITD HV HHLFFT+IPHY+L  ATAA+R  L+  G Y+ R++ +FL  F   +YRL +
Sbjct:  127 MSHPWMTKEVFE-DLTPFEQALLENPLSLFIKYTFLYLFAGKMDGSHVVPFSPLFTDTKERVQCAVSTLGMVVAGALVYIGLEGGKEGGMARIGSIYVVPLLVFNAWITMVTYLQHHDEDTKVYAEGEWNYIKGALETIDREYGMGIDDLSHNITDGHVAHHLFFTQIPHYHLTAATAAVRQCLQPTGTYKKRRSWNFLARFTELNYRLKY 336          
BLAST of mRNA_H-elongata_contig65259.14114.1 vs. uniprot
Match: A0A7S4PZI0_9DINO (Hypothetical protein n=2 Tax=Sar TaxID=2698737 RepID=A0A7S4PZI0_9DINO)

HSP 1 Score: 162 bits (411), Expect = 1.330e-44
Identity = 86/202 (42.57%), Postives = 134/202 (66.34%), Query Frame = 0
Query:    2 SYPWFGTEQFEKEVDPFTKFWFKTPLFPLTAF-FTYLVMGWYDGSHFNPFSVLFWTRREQAQCAVSTTSVVIMAYVMTSCLEFNWSAIVMRHVVPLLIMNYWLIMVTYLQHHEDDTNTFDDEDFHFATAAMETVDRSFGWGIDDAHHNITDCHVVHHLFFTKIPHYNLKKATAALRPYLEALG--LYRYRKNPHFLWVFMRD 200
            S+PW   + +  +++       + PLF    + + YL+ G  DGSHF+PFS LF T +++ QCAVS+ SVV  +  M    + +W      +  PL   N WL++VTYLQHH+D+T  +D+ ++++   A ETVDR++G+GIDD HHNITD HV+HH+FFT+IPHY+LK+ATAA+ P ++  G  LY+++++  FL+ + R+
Sbjct:  165 SHPWMRQQDWA-QLNAIQAAGMECPLFAFVGYTWIYLLAGICDGSHFSPFSKLFETTQQRVQCAVSSLSVVAFSVGMYFYFD-SWGQWFSMYFGPLCFFNMWLVLVTYLQHHDDETLAYDEGEWNYLRGAFETVDRTYGFGIDDIHHNITDGHVLHHIFFTQIPHYHLKEATAAIVPVIQKYGKGLYKHQESRDFLYKYSRN 364          
BLAST of mRNA_H-elongata_contig65259.14114.1 vs. uniprot
Match: I2CR09_NANGC (Glycerolipid omega-3 fatty acid desaturase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR09_NANGC)

HSP 1 Score: 157 bits (398), Expect = 4.440e-42
Identity = 90/211 (42.65%), Postives = 130/211 (61.61%), Query Frame = 0
Query:    1 MSYPWFGTEQFEKEVDPFTKFWFKTPLFPLTAF-FTYLVMGWYDGSHFNPFSVLFWTRREQAQCAVSTTSVVIMAYVMTSCLEFNWSAIVMR----HVVPLLIMNYWLIMVTYLQHHEDDTNTFDDEDFHFATAAMETVDRSFGWGIDDAHHNITDCHVVHHLFFTKIPHYNLKKATAALRPYLEALGLYRYRKNPHFLWVFMRDSYRLGF 206
            MS+PW   E FE ++ PF +   + PL     + F YL  G  DGSH  P S LF   +E+ QCAVST  +++   ++   LE      + R    +++PLL+ N W+ MVTYLQHH++DT  + + ++ +   A+ET+DR +G GIDD  HNITD HV HHLFFT+IPHY+LK ATAA+R  L   G Y+ +++ +FL  F   +Y+L +
Sbjct:  177 MSHPWMTQEIFE-DLTPFEQALLENPLSLFIKYTFLYLFAGKLDGSHVLPTSPLFSDTKERIQCAVSTLCMLVAGVLIYVGLEGGAEGGLARIGSMYLIPLLVFNAWITMVTYLQHHDEDTKVYAEGEWSYIKGALETIDREYGMGIDDLSHNITDGHVAHHLFFTQIPHYHLKDATAAVRQLLTPTGTYKKKQSWNFLGKFTELNYKLKY 386          
BLAST of mRNA_H-elongata_contig65259.14114.1 vs. uniprot
Match: A0A4U8UWN0_STECR (FA_desaturase domain-containing protein n=2 Tax=Steinernema carpocapsae TaxID=34508 RepID=A0A4U8UWN0_STECR)

HSP 1 Score: 154 bits (389), Expect = 5.600e-41
Identity = 84/181 (46.41%), Postives = 113/181 (62.43%), Query Frame = 0
Query:   29 PLTAFFTYLVM---GWYDGSHFNPFSVLFWTRREQAQCAVSTTSVVIMAYVMTSCLEFNWSAIVMRHVVPLLIMNYWLIMVTYLQHHEDDTNTFDDEDFHFATAAMETVDRSFGWGIDDAHHNITDCHVVHHLFFTKIPHYNLKKATAALRPYLEALGLYRYRKNPHFLWVFMRDSYRLGF 206
            P++AFF ++V    G  DGSHF P S LF +  E+ QC +S  +  + AYV  +   ++W      ++VP+L   +WL MVTYLQH  DD N ++D  + +    M+T+DR +G+GID   H+ITD HV HHLFFTKIPHYNL KAT ALR  LE  G+YR R +  FL  F R + RL +
Sbjct:  231 PVSAFFRWVVYTFGGVTDGSHFWPGSSLFNSTTERIQCFISGLACALCAYVAFAFCSYDWLTYGKFYIVPVLCQGFWLTMVTYLQHQSDDINVYEDGTWGYVRGQMQTIDRPYGFGIDQLMHHITDGHVAHHLFFTKIPHYNLMKATKALRDKLEPFGVYRRRVSYDFLLEFCRLNMRLEY 411          
BLAST of mRNA_H-elongata_contig65259.14114.1 vs. uniprot
Match: A0A6V7U4C9_9BILA (Hypothetical protein n=3 Tax=Meloidogyne enterolobii TaxID=390850 RepID=A0A6V7U4C9_9BILA)

HSP 1 Score: 152 bits (384), Expect = 8.370e-41
Identity = 87/206 (42.23%), Postives = 127/206 (61.65%), Query Frame = 0
Query:    1 MSYPWFGTEQFEKEVDPFTKFWFKTPLFPLTAFFT----YLVMGWYDGSHFNPFSVLFWTRREQAQCAVSTTSVVIMAYVMTSCLEFNWSAIVMRHVVPLL--IMNYWLIMVTYLQHHEDDTNTFDDEDFHFATAAMETVDRSFGWGIDDAHHNITDCHVVHHLFFTKIPHYNLKKATAALRPYL--EALGLYRYRKNPHFLWVFM 198
            MS+PW   E+    ++  +K + K   FPLT F +    Y + G  DGSHF P+S LF    ++ +CAVS  +  + AY+   C  +N       + VP++  ++ +WL+M+TYLQHH++ T  ++D  + F    ++TVDRSFG+GID A HNITD HV HHLFFT+IPHYNL KAT A++  L  +  G Y+Y+K+  FL  F+
Sbjct:  129 MSHPWIP-EKLYLSLNWISKHYLK---FPLTGFVSWIPLYTIFGIPDGSHFWPWSKLFENNTDRIKCAVSVAACFLCAYIALYCSNYNLWIFFKYYYVPVMFQVLCFWLVMITYLQHHDEQTEVYEDGTWGFVKGQLQTVDRSFGFGIDKAMHNITDGHVAHHLFFTRIPHYNLPKATEAVKRILMEKYPGTYKYKKSYDFLIEFL 330          
BLAST of mRNA_H-elongata_contig65259.14114.1 vs. uniprot
Match: A0A4D9DBT0_9STRA (FA_desaturase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBT0_9STRA)

HSP 1 Score: 151 bits (381), Expect = 2.270e-40
Identity = 86/209 (41.15%), Postives = 127/209 (60.77%), Query Frame = 0
Query:    3 YPWFGTEQFEKEVDPFTKFWFKTPLFPLTAF-FTYLVMGWYDGSHFNPFSVLFWTRREQAQCAVSTTSVVIMAYVMTSCLEFNWSAIVMR----HVVPLLIMNYWLIMVTYLQHHEDDTNTFDDEDFHFATAAMETVDRSFGWGIDDAHHNITDCHVVHHLFFTKIPHYNLKKATAALRPYLEALGLYRYRKNPHFLWVFMRDSYRLGF 206
            +PW      +K++ PF +   + PL     + F YL  G  DGSH  P S LF   +E+ QCAVST  +++   ++   LE      + R    +++PLL+ N W+ MVTYLQHH++DT  + + ++ +   A+ET+DR +G GIDD  HNITD HV HHLFFT+IPHY+LK ATAA+R  L   G Y+ +++ +FL  F   +Y+L +
Sbjct:  107 WPW------QKDLTPFEQALLENPLSLFIKYTFLYLFAGKLDGSHVLPTSPLFSGTKERIQCAVSTLCMLVAGVLIYVGLEGGAEGGLARIGSMYLIPLLVFNAWITMVTYLQHHDEDTKVYAEGEWSYIKGALETIDREYGMGIDDLSHNITDGHVAHHLFFTQIPHYHLKDATAAVRQLLTPTGTYKKKQSWNFLGKFTELNYKLKY 309          
BLAST of mRNA_H-elongata_contig65259.14114.1 vs. uniprot
Match: A0A0N5D9B4_THECL (FA_desaturase domain-containing protein n=1 Tax=Thelazia callipaeda TaxID=103827 RepID=A0A0N5D9B4_THECL)

HSP 1 Score: 148 bits (374), Expect = 2.600e-39
Identity = 80/202 (39.60%), Postives = 117/202 (57.92%), Query Frame = 0
Query:    1 MSYPWFGTEQFEKEVDPFTKFWFKTPLFPLTAFFT----YLVMGWYDGSHFNPFSVLFWTRREQAQCAVSTTSVVIMAYVMTSCLEFNWSAIVMRHVVPLLIMNYWLIMVTYLQHHEDDTNTFDDEDFHFATAAMETVDRSFGWGIDDAHHNITDCHVVHHLFFTKIPHYNLKKATAALRPYLEALGLYRYRKNPHFLWVFM 198
            M +PW   E F +    F  F      FPL+ F      Y V+G  DGSHF P+S LF   RE+ QC +S  S ++ A       +++W   +  + + LL   YWL+++TYLQH++     +++  + +    ++T+DR +G+GID A H+ITD HV HH FFTKIPHY+L KATAA++  LE  G YR + N  FLW ++
Sbjct:  145 MGHPWILEEDFLRRGWIFRHF----SKFPLSGFIRWNPIYTVVGLPDGSHFWPYSKLFNNNRERVQCLISGLSCLLCAVGAFVICDYSWFLFIKYYYISLLFQGYWLVIITYLQHNDYSIEVYEEGYWSYVMGQVQTIDRVYGFGIDVAMHHITDGHVAHHFFFTKIPHYHLMKATAAIKKVLEPYGAYRCKSNYDFLWEYL 342          
BLAST of mRNA_H-elongata_contig65259.14114.1 vs. uniprot
Match: A0A4Y5R1F4_9BILA (Fatty acid desaturase n=1 Tax=Mesorhabditis longespiculosa TaxID=473162 RepID=A0A4Y5R1F4_9BILA)

HSP 1 Score: 148 bits (373), Expect = 1.130e-38
Identity = 81/195 (41.54%), Postives = 117/195 (60.00%), Query Frame = 0
Query:    3 YPWFGTEQFEKEVDPFTKFWFKTPLFPLTAFFTYLVMGWYDGSHFNPFSVLFWTRREQAQCAVSTTSVVIMAYVMTSCLEFNWSAIVMRHVVPLLIMNYWLIMVTYLQHHEDDTNTFDDEDFHFATAAMETVDRSFGWGIDDAHHNITDCHVVHHLFFTKIPHYNLKKATAALRPYLEALGLYRYRKNPHFLWVF 197
            +PW   E  E+   P  KF+   P+     +F Y + G  DGSHF PFS +F    E+ QCAVS    +  A      L+++  +    +++P++   +WL MVTYLQH  +D   F+D  + +    ++T+DR +G+GID   H+ITD HV HHLFFT+IPHYNL KAT AL+  LE LG+YR++K+  FL+ F
Sbjct:  204 HPWITNETHERW-GPVQKFYANNPITAPLRWFVYTLGGVTDGSHFWPFSRMFDNTTERIQCAVSGLCCLAWASAAFWYLDYDVYSWTKFYLLPVISQGFWLTMVTYLQHQTEDIKVFEDGTWGYVKGQLQTIDRPYGFGIDQLMHHITDGHVAHHLFFTQIPHYNLMKATKALQEKLEPLGVYRHQKSHDFLYQF 397          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig65259.14114.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JXI4_9PHAE2.140e-12473.31FA_desaturase domain-containing protein n=2 Tax=Ec... [more]
A0A835YPJ0_9STRA1.240e-7756.34Fatty acid desaturase n=1 Tax=Tribonema minus TaxI... [more]
A0A1S7C7R3_9STRA1.470e-4545.02Om n=1 Tax=Nannochloropsis oceanica TaxID=145522 R... [more]
A0A7S4PZI0_9DINO1.330e-4442.57Hypothetical protein n=2 Tax=Sar TaxID=2698737 Rep... [more]
I2CR09_NANGC4.440e-4242.65Glycerolipid omega-3 fatty acid desaturase (Fragme... [more]
A0A4U8UWN0_STECR5.600e-4146.41FA_desaturase domain-containing protein n=2 Tax=St... [more]
A0A6V7U4C9_9BILA8.370e-4142.23Hypothetical protein n=3 Tax=Meloidogyne enterolob... [more]
A0A4D9DBT0_9STRA2.270e-4041.15FA_desaturase domain-containing protein n=1 Tax=Na... [more]
A0A0N5D9B4_THECL2.600e-3939.60FA_desaturase domain-containing protein n=1 Tax=Th... [more]
A0A4Y5R1F4_9BILA1.130e-3841.54Fatty acid desaturase n=1 Tax=Mesorhabditis longes... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR32100FAMILY NOT NAMEDcoord: 5..199
NoneNo IPR availablePANTHERPTHR32100:SF0TEMPERATURE-SENSITIVE SN-2 ACYL-LIPID OMEGA-3 DESATURASE (FERREDOXIN), CHLOROPLASTICcoord: 5..199
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 43..61
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..42
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 93..111
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 82..92
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 62..81
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 112..235
NoneNo IPR availableTMHMMTMhelixcoord: 87..109
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig65259contigH-elongata_contig65259:452..2303 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig65259.14114.1mRNA_H-elongata_contig65259.14114.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig65259 296..2556 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig65259.14114.1 ID=prot_H-elongata_contig65259.14114.1|Name=mRNA_H-elongata_contig65259.14114.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=236bp
MSYPWFGTEQFEKEVDPFTKFWFKTPLFPLTAFFTYLVMGWYDGSHFNPF
SVLFWTRREQAQCAVSTTSVVIMAYVMTSCLEFNWSAIVMRHVVPLLIMN
YWLIMVTYLQHHEDDTNTFDDEDFHFATAAMETVDRSFGWGIDDAHHNIT
DCHVVHHLFFTKIPHYNLKKATAALRPYLEALGLYRYRKNPHFLWVFMRD
SYRLGFHTHSKARDHRAKLHFKDSSRKPGAKKKAL*
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