mRNA_H-elongata_contig652.14112.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig652.14112.1 vs. uniprot
Match: D7FYU7_ECTSI (Dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYU7_ECTSI) HSP 1 Score: 129 bits (324), Expect = 1.440e-32 Identity = 65/106 (61.32%), Postives = 82/106 (77.36%), Query Frame = 1
Query: 1 GVRVSDGYSLVKALGKPVVLRQWHLHGLPSDKTSLESAIVTTSIATGRWPLLIDPQQQACRWLKHKEARQDLASGDRGLAENSGASSSHVAGGLMCANAGTPAVLS 318
GVRVSDG+S+ + L PVVLR+WHL GLPSDKTS++SAI T++ATGRWPLLIDPQ+QACRWLK+K A Q+ S A + +S V GL+CANAG+P++LS
Sbjct: 3006 GVRVSDGFSVAQVLITPVVLREWHLQGLPSDKTSVDSAIAATTVATGRWPLLIDPQRQACRWLKNKAAAQENISSTETTAVRN--ASPEVDEGLLCANAGSPSLLS 3109
BLAST of mRNA_H-elongata_contig652.14112.1 vs. uniprot
Match: Q24IM0_TETTS (Dynein heavy chain n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=Q24IM0_TETTS) HSP 1 Score: 82.0 bits (201), Expect = 5.810e-16 Identity = 34/66 (51.52%), Postives = 52/66 (78.79%), Query Frame = 1
Query: 4 VRVSDGYSLVKALGKPVVLRQWHLHGLPSDKTSLESAIVTTSIATGRWPLLIDPQQQACRWLKHKE 201
+++S+GYSL LG+P+++R+W+++GLPSD S E+ I+T + T RWPL+IDPQQQA RW++ E
Sbjct: 3988 IQISEGYSLESTLGEPIIIRKWNMNGLPSDAFSRENGIITYN--TRRWPLMIDPQQQANRWIRKNE 4051
BLAST of mRNA_H-elongata_contig652.14112.1 vs. uniprot
Match: A0A182GUR9_AEDAL (Uncharacterized protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GUR9_AEDAL) HSP 1 Score: 80.5 bits (197), Expect = 2.010e-15 Identity = 35/68 (51.47%), Postives = 52/68 (76.47%), Query Frame = 1
Query: 13 SDGYSLVKALGKPVVLRQWHLHGLPSDKTSLESAIVTTSIATGRWPLLIDPQQQACRWLKHKEARQDL 216
SD ++LVK LG +RQW++ GLP D+ S+E+AI++T GRWPL+IDPQ+QA RW+++ EA+ +L
Sbjct: 2848 SDSFNLVKILGDSFKIRQWNIFGLPRDEISIENAIISTE--AGRWPLIIDPQEQANRWVRNMEAQNEL 2913
BLAST of mRNA_H-elongata_contig652.14112.1 vs. uniprot
Match: A0A086KJJ5_TOXGO (ATPase family associated with various cellular activities (AAA) domain-containing protein (Fragment) n=3 Tax=Toxoplasma gondii TaxID=5811 RepID=A0A086KJJ5_TOXGO) HSP 1 Score: 80.1 bits (196), Expect = 2.700e-15 Identity = 36/73 (49.32%), Postives = 52/73 (71.23%), Query Frame = 1
Query: 1 GVRVSDGYSLVKALGKPVVLRQWHLHGLPSDKTSLESAI-VTTSIATGRWPLLIDPQQQACRWLKHKEARQDL 216
G+ +D +SL + L P+ LR W L GLPSD+TSLES + V +++ GR PL+IDPQQQA +W+K++E+ L
Sbjct: 1254 GIACADNFSLTEVLSDPIELRDWDLQGLPSDRTSLESGVFVRSAVKLGRAPLVIDPQQQAKKWIKNRESENGL 1326
BLAST of mRNA_H-elongata_contig652.14112.1 vs. uniprot
Match: A0A7S2W474_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W474_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 3.060e-15 Identity = 35/72 (48.61%), Postives = 51/72 (70.83%), Query Frame = 1
Query: 1 GVRVSDGYSLVKALGKPVVLRQWHLHGLPSDKTSLESAIVTTSIATGRWPLLIDPQQQACRWLKHKEARQDL 216
G+ S+ +SLVK +G PV++R+W + GLP+D+ S +AI+ T RWPL+IDPQ QA RW+K KE+R +
Sbjct: 122 GIPCSNTFSLVKVIGDPVLVREWQIFGLPTDEISTNNAILATR--GKRWPLMIDPQMQANRWIKQKESRNGI 191
BLAST of mRNA_H-elongata_contig652.14112.1 vs. uniprot
Match: A0A7M6DM49_9CNID (Uncharacterized protein n=2 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M6DM49_9CNID) HSP 1 Score: 79.7 bits (195), Expect = 3.750e-15 Identity = 38/72 (52.78%), Postives = 48/72 (66.67%), Query Frame = 1
Query: 1 GVRVSDGYSLVKALGKPVVLRQWHLHGLPSDKTSLESAIVTTSIATGRWPLLIDPQQQACRWLKHKEARQDL 216
G+ SD YSL+ L P +RQW+ GLPSD S+E+AI+ T RWPL+IDPQ QA RW++ KEAR L
Sbjct: 2986 GIPASDDYSLIHVLADPFEIRQWNSDGLPSDSLSIENAILVTR--GRRWPLMIDPQDQANRWIRTKEARNGL 3055
BLAST of mRNA_H-elongata_contig652.14112.1 vs. uniprot
Match: UPI001304464F (dynein heavy chain 6, axonemal n=1 Tax=Nomia melanderi TaxID=2448451 RepID=UPI001304464F) HSP 1 Score: 79.3 bits (194), Expect = 5.110e-15 Identity = 39/73 (53.42%), Postives = 50/73 (68.49%), Query Frame = 1
Query: 1 GVRVSDGYSLVKALGKPVVLRQWHLHGLPSDKTSLESAI-VTTSIATGRWPLLIDPQQQACRWLKHKEARQDL 216
GV+ ++ YSLV L P +R W+ HGLP DK S E+AI VT SI RWPL+IDPQ+QA RW+++ E DL
Sbjct: 2976 GVKTTESYSLVSILADPYKIRLWNTHGLPRDKVSTENAIFVTQSI---RWPLMIDPQEQANRWIRNMEQENDL 3045
BLAST of mRNA_H-elongata_contig652.14112.1 vs. uniprot
Match: A0A1S4EW29_AEDAE (Dynein heavy chain n=1 Tax=Aedes aegypti TaxID=7159 RepID=A0A1S4EW29_AEDAE) HSP 1 Score: 78.6 bits (192), Expect = 9.520e-15 Identity = 34/68 (50.00%), Postives = 51/68 (75.00%), Query Frame = 1
Query: 13 SDGYSLVKALGKPVVLRQWHLHGLPSDKTSLESAIVTTSIATGRWPLLIDPQQQACRWLKHKEARQDL 216
SD ++LVK LG +RQW++ GLP D+ S+E+AI++T GRWPL+IDPQ+QA RW+++ E+ +L
Sbjct: 2822 SDKFNLVKILGDSFQIRQWNIFGLPRDEISIENAIISTE--AGRWPLIIDPQEQANRWIRNMESHNEL 2887
BLAST of mRNA_H-elongata_contig652.14112.1 vs. uniprot
Match: Q17P46_AEDAE (AAEL000512-PA n=1 Tax=Aedes aegypti TaxID=7159 RepID=Q17P46_AEDAE) HSP 1 Score: 78.6 bits (192), Expect = 9.520e-15 Identity = 34/68 (50.00%), Postives = 51/68 (75.00%), Query Frame = 1
Query: 13 SDGYSLVKALGKPVVLRQWHLHGLPSDKTSLESAIVTTSIATGRWPLLIDPQQQACRWLKHKEARQDL 216
SD ++LVK LG +RQW++ GLP D+ S+E+AI++T GRWPL+IDPQ+QA RW+++ E+ +L
Sbjct: 2868 SDKFNLVKILGDSFQIRQWNIFGLPRDEISIENAIISTE--AGRWPLIIDPQEQANRWIRNMESHNEL 2933
BLAST of mRNA_H-elongata_contig652.14112.1 vs. uniprot
Match: UPI001863DCD9 (LOW QUALITY PROTEIN: dynein heavy chain 6, axonemal n=1 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI001863DCD9) HSP 1 Score: 78.6 bits (192), Expect = 9.530e-15 Identity = 36/72 (50.00%), Postives = 47/72 (65.28%), Query Frame = 1
Query: 1 GVRVSDGYSLVKALGKPVVLRQWHLHGLPSDKTSLESAIVTTSIATGRWPLLIDPQQQACRWLKHKEARQDL 216
G+ +SDG+SLV LG P +RQW+ GLP D S E+ I+ T RWPL+IDPQ QA RW++ KE + L
Sbjct: 3032 GIPISDGFSLVNILGDPYEIRQWNAEGLPRDTVSTENGILVTR--GRRWPLMIDPQDQANRWIRSKETKNGL 3101 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig652.14112.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig652.14112.1 >prot_H-elongata_contig652.14112.1 ID=prot_H-elongata_contig652.14112.1|Name=mRNA_H-elongata_contig652.14112.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=106bp GVRVSDGYSLVKALGKPVVLRQWHLHGLPSDKTSLESAIVTTSIATGRWPback to top mRNA from alignment at H-elongata_contig652:16444..17100- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig652.14112.1 ID=mRNA_H-elongata_contig652.14112.1|Name=mRNA_H-elongata_contig652.14112.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=657bp|location=Sequence derived from alignment at H-elongata_contig652:16444..17100- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig652:16444..17100- >mRNA_H-elongata_contig652.14112.1 ID=mRNA_H-elongata_contig652.14112.1|Name=mRNA_H-elongata_contig652.14112.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=636bp|location=Sequence derived from alignment at H-elongata_contig652:16444..17100- (Himanthalia elongata Himel1 dioecious)back to top |