mRNA_H-elongata_contig65166.14108.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig65166.14108.1 vs. uniprot
Match: D7FN09_ECTSI (EstExt_Genewise1.C_60040 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN09_ECTSI) HSP 1 Score: 246 bits (629), Expect = 2.930e-73 Identity = 123/149 (82.55%), Postives = 138/149 (92.62%), Query Frame = 1
Query: 4 GADVFSPYLGEAEAAVRQAFLLARNAAPALLFFDEIDAIVCKRDGGNTGSSNSAESRVLATFLTEMDGVGSLRGDGVVVVGATNRPEAVDKALLRPGRFDQLVYAALPDADARRQIFEVHTKKMAVDKTDVDFVELAAVSKGLTGAEIE 450
GADVFSPYLGEAEA +RQAF +ARNAAPA+LFFDEIDAIVC R GG GS++SAESRVLATFLTEMDGVGSL+GDGVVVVGATNRPEAVD+ALLRPGRFDQ+VYA LP+ +ARRQIFEVHT++MAVD+ DVDF+ LA V+KGLTGAEIE
Sbjct: 860 GADVFSPYLGEAEAEIRQAFRIARNAAPAILFFDEIDAIVCNRGGGGKGSASSAESRVLATFLTEMDGVGSLKGDGVVVVGATNRPEAVDRALLRPGRFDQVVYAPLPEENARRQIFEVHTRRMAVDREDVDFLRLAGVTKGLTGAEIE 1008
BLAST of mRNA_H-elongata_contig65166.14108.1 vs. uniprot
Match: A0A7S1XWH5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XWH5_9STRA) HSP 1 Score: 179 bits (453), Expect = 1.510e-52 Identity = 93/152 (61.18%), Postives = 117/152 (76.97%), Query Frame = 1
Query: 4 GADVFSPYLGEAEAAVRQAFLLARNAAPALLFFDEIDAIVCKRD---GGNTGSSNSAESRVLATFLTEMDGVGSLRGDGVVVVGATNRPEAVDKALLRPGRFDQLVYAALPDADARRQIFEVHTKKMAVDKTDVDFVELAAVSKGLTGAEIE 450
GADVFSPY+GEAEA +R+AF LAR+A PA+LFFDE+DA+V RD GG + +S SAE+RVLATFL EMDGV + DGV+V+ ATNRP A+D+ALLRPGRFD V LPD +AR QIF +HT+ +D+ + F ELA +++G TGAEIE
Sbjct: 144 GADVFSPYVGEAEARIRRAFALARSAIPAVLFFDEVDALVPARDMEGGGGSAASGSAEARVLATFLNEMDGVDTGARDGVIVMAATNRPRAIDRALLRPGRFDVRVLVGLPDLEAREQIFRIHTRGTPLDE-GLSFAELAGMAEGFTGAEIE 294
BLAST of mRNA_H-elongata_contig65166.14108.1 vs. uniprot
Match: A0A7R9U7X6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7X6_9STRA) HSP 1 Score: 175 bits (443), Expect = 4.210e-50 Identity = 89/149 (59.73%), Postives = 114/149 (76.51%), Query Frame = 1
Query: 4 GADVFSPYLGEAEAAVRQAFLLARNAAPALLFFDEIDAIVCKRDGGNTGSSNSAESRVLATFLTEMDGVGSLRGDGVVVVGATNRPEAVDKALLRPGRFDQLVYAALPDADARRQIFEVHTKKMAVDKTDVDFVELAAVSKGLTGAEIE 450
GA+VFSPY+GEAE +R+AF LAR A PA++FFDEIDA+V KRD + G+S SAESRVLATFL EMDGV + G++V+ ATNRP+A+D+ALLRPGRFD V+ LPDA+AR +IF +HT++ + VD +LA S G +GAEIE
Sbjct: 239 GAEVFSPYVGEAEGNIRRAFALARTATPAVIFFDEIDALVPKRDRESGGNSGSAESRVLATFLNEMDGVDTAMNSGIMVMAATNRPQAIDEALLRPGRFDVRVFVGLPDAEARAEIFRIHTRRTPLHPA-VDLRQLAQESSGFSGAEIE 386
BLAST of mRNA_H-elongata_contig65166.14108.1 vs. uniprot
Match: A0A7S4DG87_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DG87_HETAK) HSP 1 Score: 161 bits (408), Expect = 8.610e-48 Identity = 88/149 (59.06%), Postives = 108/149 (72.48%), Query Frame = 1
Query: 4 GADVFSPYLGEAEAAVRQAFLLARNAAPALLFFDEIDAIVCKRDGGNTGSSNSAESRVLATFLTEMDGVGSLRGDGVVVVGATNRPEAVDKALLRPGRFDQLVYAALPDADARRQIFEVHTKKMAVDKTDVDFVELAAVSKGLTGAEIE 450
GADV+SP+LG+AEA +R AF AR A PA+LFFDEIDA+V G S AE+RVLATFL EMDGV + G G+VV+ ATNRP +D ALLRPGRFD ++Y PD +AR QIF +HTK M +D DVD +LAA ++G TGAEI+
Sbjct: 20 GADVYSPFLGDAEANIRSAFQTARAACPAVLFFDEIDAVV---GSGRGDSGGGAEARVLATFLNEMDGVDAANG-GLVVLAATNRPWVLDAALLRPGRFDNIIYIPPPDEEARAQIFRIHTKNMQLDD-DVDLAKLAADTEGYTGAEIK 163
BLAST of mRNA_H-elongata_contig65166.14108.1 vs. uniprot
Match: A0A7S2WIZ5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WIZ5_9STRA) HSP 1 Score: 152 bits (385), Expect = 3.000e-43 Identity = 80/147 (54.42%), Postives = 98/147 (66.67%), Query Frame = 1
Query: 7 ADVFSPYLGEAEAAVRQAFLLARNAAPALLFFDEIDAIVCKRDGGNTGSSNSAESRVLATFLTEMDGVGSLRGDGVVVVGATNRPEAVDKALLRPGRFDQLVYAALPDADARRQIFEVHTKKMAVDKTDVDFVELAAVSKGLTGAEI 447
ADVFSP++G+AEAA+R+AF LAR+ +P++LFFDEIDA+V R G+ S ESRVLATFL EMDG+ + DGV V+ ATNRP VD ALLRPGRF+ +Y PD ARR I +H M DV L +K TGAEI
Sbjct: 52 ADVFSPFVGDAEAAIRKAFRLARSCSPSILFFDEIDAVVMNRGSGDRSGGGSVESRVLATFLNEMDGISATCSDGVTVMAATNRPAEVDSALLRPGRFELSIYIGPPDVAARRAILSLHVHSMPTSH-DVSVERLVEQTKHFTGAEI 197
BLAST of mRNA_H-elongata_contig65166.14108.1 vs. uniprot
Match: A0A7S2WJR3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJR3_9STRA) HSP 1 Score: 152 bits (385), Expect = 2.220e-42 Identity = 80/147 (54.42%), Postives = 98/147 (66.67%), Query Frame = 1
Query: 7 ADVFSPYLGEAEAAVRQAFLLARNAAPALLFFDEIDAIVCKRDGGNTGSSNSAESRVLATFLTEMDGVGSLRGDGVVVVGATNRPEAVDKALLRPGRFDQLVYAALPDADARRQIFEVHTKKMAVDKTDVDFVELAAVSKGLTGAEI 447
ADVFSP++G+AEAA+R+AF LAR+ +P++LFFDEIDA+V R G+ S ESRVLATFL EMDG+ + DGV V+ ATNRP VD ALLRPGRF+ +Y PD ARR I +H M DV L +K TGAEI
Sbjct: 134 ADVFSPFVGDAEAAIRKAFRLARSCSPSILFFDEIDAVVMNRGSGDRSGGGSVESRVLATFLNEMDGISATCSDGVTVMAATNRPAEVDSALLRPGRFELSIYIGPPDVAARRAILSLHVHSMPTSH-DVSVERLVEQTKHFTGAEI 279
BLAST of mRNA_H-elongata_contig65166.14108.1 vs. uniprot
Match: D8LWF0_BLAHO (AAA domain-containing protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8LWF0_BLAHO) HSP 1 Score: 148 bits (374), Expect = 1.580e-41 Identity = 76/147 (51.70%), Postives = 106/147 (72.11%), Query Frame = 1
Query: 10 DVFSPYLGEAEAAVRQAFLLARNAAPALLFFDEIDAIVCKRDGGNTGSSNSAESRVLATFLTEMDGVGSLRGDGVVVVGATNRPEAVDKALLRPGRFDQLVYAALPDADARRQIFEVHTKKMAVDKTDVDFVELAAVSKGLTGAEIE 450
VF+PY+GE+E +R F AR A PA++F DEIDA+VCKR G + +SRV+ATFLTEMDG+ + DG++V+GATNRP+ +D ALLRPGR +L+Y PD + R++IFEV+T ++ VD++ VD ELA + G +GA+IE
Sbjct: 82 QVFTPYVGESEFIIRSLFQRARAATPAVVFLDEIDALVCKRS--LAGGDDVVQSRVMATFLTEMDGIEN--SDGIIVIGATNRPDMIDDALLRPGRLGELIYVPPPDLETRKKIFEVYTSRIHVDES-VDLDELAEKTNGFSGADIE 223
BLAST of mRNA_H-elongata_contig65166.14108.1 vs. uniprot
Match: F0XX05_AURAN (AAA domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XX05_AURAN) HSP 1 Score: 145 bits (367), Expect = 5.370e-41 Identity = 78/148 (52.70%), Postives = 99/148 (66.89%), Query Frame = 1
Query: 4 GADVFSPYLGEAEAAVRQAFLLARNAAPALLFFDEIDAIVCKRDGGNTGSSNSAESRVLATFLTEMDGVGSLRGDGVVVVGATNRPEAVDKALLRPGRFDQLVYAALPDADARRQIFEVHTKKMAVDKTDVDFVELAAVSKGLTGAEI 447
GADV+SPYLGEAEA VR+AF A A P +LFFDEIDA+VC R GG+ AE+RVL+TFL +DG DGVV +GATNRP A+D+ALLRPGR + VY LP R + VH + + + DVD LAA ++G +GA++
Sbjct: 75 GADVYSPYLGEAEATVRRAFAAADAATPCILFFDEIDALVCDRAGGD---GRGAEARVLSTFLNCLDGASGGPRDGVVTLGATNRPHAIDRALLRPGRLETSVYVGLPGLADREAVLAVHARGLPL-AADVDLAALAARTRGFSGADL 218
BLAST of mRNA_H-elongata_contig65166.14108.1 vs. uniprot
Match: A0A1J4JUR0_9EUKA (Uncharacterized protein n=1 Tax=Tritrichomonas foetus TaxID=1144522 RepID=A0A1J4JUR0_9EUKA) HSP 1 Score: 152 bits (384), Expect = 4.840e-40 Identity = 80/148 (54.05%), Postives = 105/148 (70.95%), Query Frame = 1
Query: 4 GADVFSPYLGEAEAAVRQAFLLARNAAPALLFFDEIDAIVCKRDGGNTGSSNSAESRVLATFLTEMDGVGSLRGDGVVVVGATNRPEAVDKALLRPGRFDQLVYAALPDADARRQIFEVHTKKMAVDKTDVDFVELAAVSKGLTGAEI 447
G ++FS ++GE+E AV F AR+AAP+++FFDEIDA+ KR SN + RVL LTEMDGV + VVV+ ATNRP+ +D AL+RPGRFD+LVY +LPD DAR++IF VH KKMA + +D VE AA++KG +GAEI
Sbjct: 578 GPELFSKFVGESEKAVASVFKKARSAAPSIIFFDEIDAMATKRGAAGDSGSNVTD-RVLTQLLTEMDGVSTRFDQSVVVIAATNRPDLLDPALMRPGRFDRLVYVSLPDEDARKEIFNVHIKKMAFED-GIDTVETAAMTKGYSGAEI 723
BLAST of mRNA_H-elongata_contig65166.14108.1 vs. uniprot
Match: A0A8J4PR76_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PR76_9MYCE) HSP 1 Score: 151 bits (381), Expect = 1.300e-39 Identity = 78/149 (52.35%), Postives = 109/149 (73.15%), Query Frame = 1
Query: 4 GADVFSPYLGEAEAAVRQAFLLARNAAPALLFFDEIDAIVCKRDGGNTGSSNSAESRVLATFLTEMDGVGSLRGDGVVVVGATNRPEAVDKALLRPGRFDQLVYAALPDADARRQIFEVHTKKMAVDKTDVDFVELAAVSKGLTGAEIE 450
GA +FSPYLG++EAA+R+ F AR P++LFFDEIDAIV KR N G + S E +L+TFL EMDGV L +GV+V+GATNR + +D ALLRPGRFD+++ +LPD D R +I +V TKK+ + DVD ++++ +++G GA+IE
Sbjct: 606 GASIFSPYLGDSEAAIREVFKKARQTIPSILFFDEIDAIVSKR---NEGENKSTELGLLSTFLNEMDGVEQL--NGVIVIGATNRIDMLDPALLRPGRFDKIIEISLPDQDTRLKILQVKTKKIPI-ANDVDLIKISEITRGYNGADIE 748 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig65166.14108.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig65166.14108.1 >prot_H-elongata_contig65166.14108.1 ID=prot_H-elongata_contig65166.14108.1|Name=mRNA_H-elongata_contig65166.14108.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=150bp AGADVFSPYLGEAEAAVRQAFLLARNAAPALLFFDEIDAIVCKRDGGNTGback to top mRNA from alignment at H-elongata_contig65166:1102..2681- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig65166.14108.1 ID=mRNA_H-elongata_contig65166.14108.1|Name=mRNA_H-elongata_contig65166.14108.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1580bp|location=Sequence derived from alignment at H-elongata_contig65166:1102..2681- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig65166:1102..2681- >mRNA_H-elongata_contig65166.14108.1 ID=mRNA_H-elongata_contig65166.14108.1|Name=mRNA_H-elongata_contig65166.14108.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=900bp|location=Sequence derived from alignment at H-elongata_contig65166:1102..2681- (Himanthalia elongata Himel1 dioecious)back to top |