prot_H-elongata_contig65143.14104.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig65143.14104.1
Unique Nameprot_H-elongata_contig65143.14104.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length108
Homology
BLAST of mRNA_H-elongata_contig65143.14104.1 vs. uniprot
Match: D7G533_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G533_ECTSI)

HSP 1 Score: 147 bits (372), Expect = 1.160e-42
Identity = 84/108 (77.78%), Postives = 92/108 (85.19%), Query Frame = 0
Query:    1 MGVEREKKRLAVARTSGAIEEAYRQDLTSHALRHNKVQDSLEGMEQRFQDTAHKAVRIGDRLSRMEAQRARAAEAMDLLETLRVLAKLKGITHELESKELDRAARNLQ 108
            MGVE E+KRLA+A  +GAIEE YRQ L SHA R N+VQDSLEG+E RFQ T HKAVRIGDRLS+ME QRARAAEAMDLLE L+VLAKLK ITHELESKELD AA+ LQ
Sbjct:   45 MGVEGERKRLAMAGETGAIEEDYRQGLASHATRLNEVQDSLEGVEHRFQWTVHKAVRIGDRLSKMEGQRARAAEAMDLLEFLKVLAKLKSITHELESKELDEAAKKLQ 152          
BLAST of mRNA_H-elongata_contig65143.14104.1 vs. uniprot
Match: D8LCE4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCE4_ECTSI)

HSP 1 Score: 135 bits (340), Expect = 5.040e-37
Identity = 85/146 (58.22%), Postives = 96/146 (65.75%), Query Frame = 0
Query:    1 MGVEREKKRLAVARTSGAIEEAYRQDLTSHALRHNKVQDSLEGMEQRFQDTAHKAVRIGDRLSRMEAQRARAAEAMDLLETLRV--------------------------------------LAKLKGITHELESKELDRAARNLQ 108
            MGVE E+KRLA+A  +GAIEE YRQ LTSHA R NKVQDSLEG+E RF++TAHKAVRIGDRLS+ME QRARAAEAMD+LE  +V                                      LAKLK ITHELESKELD+AA+NLQ
Sbjct:   79 MGVEGERKRLAMAGETGAIEEDYRQGLTSHATRLNKVQDSLEGVEHRFRETAHKAVRIGDRLSKMEGQRARAAEAMDILEFFKVFEGLPEGFSEDQDTVVRYMKLLPPVFCDEDRRAEAATVLAKLKSITHELESKELDKAAKNLQ 224          
BLAST of mRNA_H-elongata_contig65143.14104.1 vs. uniprot
Match: A0A6H5KKI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKI1_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 1.230e-36
Identity = 86/146 (58.90%), Postives = 96/146 (65.75%), Query Frame = 0
Query:    1 MGVEREKKRLAVARTSGAIEEAYRQDLTSHALRHNKVQDSLEGMEQRFQDTAHKAVRIGDRLSRMEAQRARAAEAMDLLETLRV--------------------------------------LAKLKGITHELESKELDRAARNLQ 108
            MGVE E+KRLA+A  +GAIEE YRQ LTSHA R NKVQDSLEG+E RF++TAHKAVRIGDRLS+ME QRARAAEAMDLLE  +V                                      LAKLK ITHELESKELD+AA+NLQ
Sbjct:  154 MGVEGERKRLAMAGETGAIEEDYRQGLTSHATRLNKVQDSLEGVEHRFRETAHKAVRIGDRLSKMEGQRARAAEAMDLLEFFKVFEGLPEGFSEDQDTVVRYMKLLPPVFCDEDRRPEAATVLAKLKSITHELESKELDKAAKNLQ 299          
BLAST of mRNA_H-elongata_contig65143.14104.1 vs. uniprot
Match: D7G517_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G517_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 4.140e-26
Identity = 67/106 (63.21%), Postives = 76/106 (71.70%), Query Frame = 0
Query:    1 MGVEREKKRLAVARTSGAIEEAYRQDLTSHALRHNKVQDSLEGMEQRFQDTAHKAVRIGDRLSRMEAQRARAAEAMDLLETLRVLAKLKGITHELESKELDRAARN 106
            MGVE E+KRLA+A  +GAIEE  RQ LTSHA R N+                  AVRIGDRLS+ME QRARAAEAMDLLE  +VLAKLK ITHELESKELD+AA++
Sbjct:   78 MGVEGERKRLAMAGETGAIEEDCRQGLTSHATRLNE------------------AVRIGDRLSKMEGQRARAAEAMDLLEFFKVLAKLKSITHELESKELDKAAKS 165          
BLAST of mRNA_H-elongata_contig65143.14104.1 vs. uniprot
Match: A0A836C6X2_9STRA (Exocyst complex component Sec10-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6X2_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 3.360e-5
Identity = 30/71 (42.25%), Postives = 45/71 (63.38%), Query Frame = 0
Query:   18 AIEEAYRQDLTSHALRHNKVQDSLEGMEQRFQDTAHKAVRIGDRLSRMEAQRARAAEAMDLLETLRVLAKL 88
            ++E+ YR  L+ H      +  +L  +++RF+     AVRIGD L R EAQRARAA+A++LLE  +V  +L
Sbjct:  106 SVEDDYRGGLSQHQSTLELLSANLARVDERFRKVTADAVRIGDSLGRKEAQRARAADAIELLEHFKVFDEL 176          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig65143.14104.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G533_ECTSI1.160e-4277.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LCE4_ECTSI5.040e-3758.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KKI1_9PHAE1.230e-3658.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G517_ECTSI4.140e-2663.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C6X2_9STRA3.360e-542.25Exocyst complex component Sec10-domain-containing ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 62..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig65143contigH-elongata_contig65143:207..2676 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig65143.14104.1mRNA_H-elongata_contig65143.14104.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig65143 207..2685 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig65143.14104.1 ID=prot_H-elongata_contig65143.14104.1|Name=mRNA_H-elongata_contig65143.14104.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=108bp
MGVEREKKRLAVARTSGAIEEAYRQDLTSHALRHNKVQDSLEGMEQRFQD
TAHKAVRIGDRLSRMEAQRARAAEAMDLLETLRVLAKLKGITHELESKEL
DRAARNLQ
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