mRNA_H-elongata_contig64990.14089.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig64990.14089.1 vs. uniprot
Match: A0A6H5LKM9_9PHAE (J domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LKM9_9PHAE) HSP 1 Score: 302 bits (773), Expect = 2.090e-97 Identity = 156/198 (78.79%), Postives = 181/198 (91.41%), Query Frame = 1
Query: 1 QGAIDSWGAALAVDKTNRAFNSKLYCNRAAAFAKLSRHDEAVAESTRALADDRSYAKAYERRAASRFELGGVENLEAACRDYEKLAEIGPEGKKREIQGKLRKAQAALKQAKRKDFYKILGVSRSADEAEIKKAYRKAALKYHPDRQSSKSEEEKEKAGKVFRDIGEAYEVLSDTQKKKRYDMGVDLEDIDNPHPGHG 594
+GAI SWG AL VDKTNR+FNSKLYCNRAAA+AKLS+H EAVAE++RAL+DD +Y KA+ERRAAS +++GGVENLEAACRDYEKL ++ P+ K+REIQGK+RK +AA+KQAKRKD+YK+LGVSRSAD+AEIKKAYRKAALKYHPDRQSSKS+EEKE+AGKVFRDI EAYEVLSD KK RYD GVDLED+DNPH GHG
Sbjct: 306 EGAIRSWGEALTVDKTNRSFNSKLYCNRAAAYAKLSKHKEAVAEASRALSDDPTYTKAFERRAASLYDMGGVENLEAACRDYEKLMDMVPDEKQREIQGKIRKTKAAVKQAKRKDYYKLLGVSRSADDAEIKKAYRKAALKYHPDRQSSKSDEEKEQAGKVFRDIAEAYEVLSDPTKKGRYDSGVDLEDLDNPHAGHG 503
BLAST of mRNA_H-elongata_contig64990.14089.1 vs. uniprot
Match: A0A836CK93_9STRA (Heat shock protein 40 like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK93_9STRA) HSP 1 Score: 217 bits (553), Expect = 6.440e-65 Identity = 119/198 (60.10%), Postives = 149/198 (75.25%), Query Frame = 1
Query: 1 QGAIDSWGAALAVDKTNRAFNSKLYCNRAAAFAKLSRHDEAVAESTRALADDRSYAKAYERRAASRFELGGVENLEAACRDYEKLAEIGPEGKKREIQGKLRKAQAALKQAKRKDFYKILGVSRSADEAEIKKAYRKAALKYHPDRQSSKSEEEKEKAGKVFRDIGEAYEVLSDTQKKKRYDMGVDLEDIDNPHPGHG 594
Q AI +W ALA+D +N+ +N+KLY NRA A A+L +H EA + A+A D +Y+KAY RRAAS F LGGVE LEAA RDYEK++++ + ++Q KL A ALKQA+RKD+YKILGV R ADE IKKAYRKAALK+HPDRQ+ K E E+ +A KVFR++ +AYEVLSD KK RYD GVDLED+DNP+ GHG
Sbjct: 269 QEAIAAWTEALAMDPSNKLYNAKLYFNRANALARLRQHREAADNAGLAIACDDTYSKAYMRRAASLFALGGVEELEAAIRDYEKVSDMLDAAGRADVQDKLHSANVALKQARRKDYYKILGVQRDADEETIKKAYRKAALKWHPDRQNGKEETERAEAEKVFREVNDAYEVLSDPAKKNRYDSGVDLEDLDNPYAGHG 466
BLAST of mRNA_H-elongata_contig64990.14089.1 vs. uniprot
Match: A0A4D9DHL1_9STRA (J domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DHL1_9STRA) HSP 1 Score: 200 bits (509), Expect = 2.450e-58 Identity = 108/194 (55.67%), Postives = 140/194 (72.16%), Query Frame = 1
Query: 1 QGAIDSWGAALAVDKTNRAFNSKLYCNRAAAFAKLSRHDEAVAESTRALADDRSYAKAYERRAASRFELGGVENLEAACRDYEKLAEIGPEGKKREIQGKLRKAQAALKQAKRKDFYKILGVSRSADEAEIKKAYRKAALKYHPDRQSSKSEEEKEKAGKVFRDIGEAYEVLSDTQKKKRYDMGVDLEDIDNPH 582
Q AID+W ALAVD + +A N+K++ NRA A+AK+ +H EAVA+ RALA D Y KA +R+A S + LGG ENLE RDYE A + P ++RE K+ + + ALK+AKRKD Y+ILG+S A E EI+KAYRK ALK+HPDR ++ SEE K A K F+D+ EAYEVLSD +K+ RYD G D+ED+DNPH
Sbjct: 277 QPAIDAWTEALAVDPSQKAVNAKMFNNRATAYAKMRKHTEAVADCKRALALDPQYLKALKRKAESLYALGGEENLEQCLRDYEVAARLAPASEEREYARKMHQVKVALKRAKRKDLYRILGLSTDATEDEIRKAYRKLALKHHPDRHTNSSEEAKAAAEKAFKDVAEAYEVLSDKEKRSRYDSGTDVEDLDNPH 470
BLAST of mRNA_H-elongata_contig64990.14089.1 vs. uniprot
Match: A0A7S2UUT7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUT7_9STRA) HSP 1 Score: 194 bits (492), Expect = 1.250e-57 Identity = 111/206 (53.88%), Postives = 150/206 (72.82%), Query Frame = 1
Query: 1 QGAIDSWGAALAVDKTNR--------AFNSKLYCNRAAAFAKLSRHDEAVAESTRALADDRSYAKAYERRAASRFELGGVENLEAACRDYEKLAEIGPEGK-KREIQGKLRKAQAALKQAKRKDFYKILGVSRSADEAEIKKAYRKAALKYHPDRQSSKSEEEKEKAGKVFRDIGEAYEVLSDTQKKKRYDMGVDLEDIDNPHPGH 591
Q AID+W L + + A KL+ N A A KL ++ + + ES+RA+ D S+ KAY RRAA +GGVE LEAA RDY+++ E+ E + KR+++ KL++A+ ALKQA+RKD+YK+LGV + A+EAEIKKAYRK ALK+HPDR ++KS+EEK KA K+F+D+GEAYEVLSD+ K++RYD GVDLED+DNPH GH
Sbjct: 99 QAAIDAWLDCLEQTRGEKWPAQTHTPALPVKLHNNCATAHFKLRQYQKGIEESSRAIDLDDSFTKAYLRRAACNEAIGGVEGLEAAIRDYKQVFEMSSEKETKRDMKSKLQRAERALKQARRKDYYKLLGVQKDAEEAEIKKAYRKLALKWHPDRHTTKSDEEKHKAEKMFKDVGEAYEVLSDSTKRQRYDAGVDLEDLDNPHAGH 304
BLAST of mRNA_H-elongata_contig64990.14089.1 vs. uniprot
Match: G4YV87_PHYSP (J domain-containing protein n=21 Tax=Peronosporaceae TaxID=4777 RepID=G4YV87_PHYSP) HSP 1 Score: 196 bits (499), Expect = 1.590e-57 Identity = 104/196 (53.06%), Postives = 147/196 (75.00%), Query Frame = 1
Query: 7 AIDSWGAALAVDKTNRAFNSKLYCNRAAAFAKLSRHDEAVAESTRALADDRSYAKAYERRAASRFELGGVENLEAACRDYEKLAEIGPEGKKREIQGKLRKAQAALKQAKRKDFYKILGVSRSADEAEIKKAYRKAALKYHPDRQSSKSEEEKEKAGKVFRDIGEAYEVLSDTQKKKRYDMGVDLEDIDNPHPGHG 594
A++ + + L +D N+AFNSK++CNRA A ++L+RH+EA+ + +A+ D YAKAY R+AA LGG+ENLE A R Y++ +++ + +R+IQ +R+ + +K+AKRKD+YKIL VS+SA EAEIKKAY++ ALK+HPDR + KSEE+K +A F+DIGEAY VLSD QK++RYD GVDLED+DN G G
Sbjct: 202 AVEMYTSCLTIDPQNKAFNSKIHCNRANALSRLNRHEEAIKDCDKAIYYDHGYAKAYLRKAACLKALGGLENLEQALRVYDQASKLVGDDAQRDIQNSIRQTKLDIKKAKRKDYYKILNVSQSATEAEIKKAYKRLALKFHPDRHAGKSEEQKAEAEAAFKDIGEAYAVLSDAQKRQRYDSGVDLEDLDNDFGGGG 397
BLAST of mRNA_H-elongata_contig64990.14089.1 vs. uniprot
Match: A0A7S0GMX5_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GMX5_9STRA) HSP 1 Score: 197 bits (501), Expect = 3.870e-57 Identity = 112/193 (58.03%), Postives = 145/193 (75.13%), Query Frame = 1
Query: 31 LAVDKTNRAFNSKLYCNRAAAFAKLSRHDEAVAESTRALADDRSYAKAYERRAASRFELGGVENLEAACRDYEKLAE-IGPEGKKREIQGKLRKAQAALKQAKRKDFYKILGVSRSADEAEIKKAYRKAALKYHPDRQSSKSEEEKEKAGKVFRDIGEAYEVLSDTQKKKRYDMGVDLEDIDNPH--PGHGHE 600
L D+ + A+ +KLY NRA + A L +HD+ VA+ TRA+ D Y KAY RRAAS +GGV++ E A RDYE L + + + +KR+IQ KLR A+ LK+A RKDFYKILGV+R ADE+EIKKAYRK ALK+HPDRQ+S +EEEK+KA +FRD+ AYEVLSD +KK+RYD GVD +D+DNP+ PG GH+
Sbjct: 289 LCPDENSGAYRAKLYFNRATSNANLRKHDQCVADCTRAIKLDDGYTKAYLRRAASYLVVGGVKDCEMAIRDYECLGDKVNSDEQKRDIQTKLRAAKVQLKRAGRKDFYKILGVARDADESEIKKAYRKMALKFHPDRQASGTEEEKQKAEVIFRDVNHAYEVLSDQEKKRRYDSGVDEQDLDNPNARPGGGHD 481
BLAST of mRNA_H-elongata_contig64990.14089.1 vs. uniprot
Match: A0A7S2SJZ2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJZ2_9STRA) HSP 1 Score: 197 bits (501), Expect = 4.720e-57 Identity = 109/196 (55.61%), Postives = 138/196 (70.41%), Query Frame = 1
Query: 7 AIDSWGAALAVDKTNRAFNSKLYCNRAAAFAKLSRHDEAVAESTRALADDRSYAKAYERRAASRFELGGVENLEAACRDYEKLAEIGPEGKKREIQGKLRKAQAALKQAKRKDFYKILGVSRSADEAEIKKAYRKAALKYHPDRQSSKSEEEKEKAGKVFRDIGEAYEVLSDTQKKKRYDMGVDLEDIDNPHPGHG 594
AI W L +D ++R +N+KLY NRA A A+L RH + V + T+A+ D Y KAY RRA S LG E LE A RDYEK AE+ E +R + KL++ + +K+A R D YK+LGVS+ + E EI+KAYRKAALK+HPDR SSKSEEEK A KVF+DI A+EVL D +KKKRYD GV++EDID+PH GHG
Sbjct: 291 AIAKWTTCLGIDASHRTYNAKLYFNRATAQARLRRHQQTVDDCTKAIELDSGYLKAYNRRAESYRILGEKEGLEQALRDYEKAAELDDEANQRSYRQKLQQVKVEIKRAGRLDLYKLLGVSKDSTEDEIRKAYRKAALKWHPDRHSSKSEEEKSNAEKVFKDINLAFEVLGDAEKKKRYDSGVEIEDIDDPHAGHG 486
BLAST of mRNA_H-elongata_contig64990.14089.1 vs. uniprot
Match: A0A662YAU2_9STRA (J domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YAU2_9STRA) HSP 1 Score: 194 bits (493), Expect = 1.700e-56 Identity = 104/196 (53.06%), Postives = 145/196 (73.98%), Query Frame = 1
Query: 7 AIDSWGAALAVDKTNRAFNSKLYCNRAAAFAKLSRHDEAVAESTRALADDRSYAKAYERRAASRFELGGVENLEAACRDYEKLAEIGPEGKKREIQGKLRKAQAALKQAKRKDFYKILGVSRSADEAEIKKAYRKAALKYHPDRQSSKSEEEKEKAGKVFRDIGEAYEVLSDTQKKKRYDMGVDLEDIDNPHPGHG 594
A++ + L +D N+AFNSK++CNRA A ++L RHDEA+ + +A+ D YAKAY R+AA LGG+ENLE A R Y++ +++ + +R+IQ +R+ + +K+AKRKDFYKIL VS++A EAEIKKAY+K ALKYHPDR + K++E+K +A F+DIGEAY VLSD QK++RYD GVDLED+D+ G G
Sbjct: 212 AVEKYTECLKIDPQNKAFNSKIHCNRANALSRLGRHDEAIKDCDKAIYYDHGYAKAYLRKAACLKALGGLENLEQALRVYDQASKLVGDDAQRDIQNSIRQTKLEVKKAKRKDFYKILAVSQTATEAEIKKAYKKLALKYHPDRHAGKTDEQKAEAEASFKDIGEAYAVLSDPQKRQRYDSGVDLEDLDSDFGGGG 407
BLAST of mRNA_H-elongata_contig64990.14089.1 vs. uniprot
Match: T0S750_SAPDV (J domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0S750_SAPDV) HSP 1 Score: 192 bits (489), Expect = 2.220e-55 Identity = 103/191 (53.93%), Postives = 144/191 (75.39%), Query Frame = 1
Query: 1 QGAIDSWGAALAVDKTNRAFNSKLYCNRAAAFAKLSRHDEAVAESTRALADDRSYAKAYERRAASRFELGGVENLEAACRDYEKLAEIGPEGKKREIQGKLRKAQAALKQAKRKDFYKILGVSRSADEAEIKKAYRKAALKYHPDRQSSKSEEEKEKAGKVFRDIGEAYEVLSDTQKKKRYDMGVDLEDID 573
Q A D++ L +D N+A+N+KL+CNRAAA +KLS+++EA+ + +A+ D SY KAY R+A ++GG +NLE A R+YE +++ E +R+ G +R+ + LK+AKRKDFYKIL VS SA +AEIKKAYRK+ALKYHPDR S+K+E+E++ A F+D+GEAY VLSD QKK+RYD GVDL+D+D
Sbjct: 255 QEAADAYSQCLLIDPANKAYNAKLHCNRAAALSKLSQNEEAIKDCDKAIYYDSSYVKAYIRKAQCLRDIGGKDNLEQALREYESASKLVGEDTQRQYAGYIRETKLELKKAKRKDFYKILDVSPSASDAEIKKAYRKSALKYHPDRHSNKTEDEQKAAETSFKDVGEAYAVLSDPQKKQRYDSGVDLDDLD 445
BLAST of mRNA_H-elongata_contig64990.14089.1 vs. uniprot
Match: A0A8J5JC93_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5JC93_9STRA) HSP 1 Score: 198 bits (503), Expect = 3.250e-55 Identity = 106/196 (54.08%), Postives = 146/196 (74.49%), Query Frame = 1
Query: 7 AIDSWGAALAVDKTNRAFNSKLYCNRAAAFAKLSRHDEAVAESTRALADDRSYAKAYERRAASRFELGGVENLEAACRDYEKLAEIGPEGKKREIQGKLRKAQAALKQAKRKDFYKILGVSRSADEAEIKKAYRKAALKYHPDRQSSKSEEEKEKAGKVFRDIGEAYEVLSDTQKKKRYDMGVDLEDIDNPHPGHG 594
A++ + L +D N+AFNSK++CNRA A ++L+RHDEA+ + +A+ D YAKAY R+AA LGG+ENLE A R Y++ +++ + +R+IQ +R+ + +K+AKRKD+YKIL VS+SA EAEIKKAY+K ALK+HPDR + KSEE+K +A F+DIGEAY VLSD QK++RYD GVDLED+DN G G
Sbjct: 253 AVEMYTECLKIDPQNKAFNSKIHCNRANALSRLNRHDEAIKDCDKAIYYDHGYAKAYLRKAACLKALGGLENLEQALRVYDQASKLVGDDAQRDIQSNIRQTKLDIKKAKRKDYYKILNVSQSATEAEIKKAYKKLALKFHPDRHAGKSEEQKAEAEAAFKDIGEAYAVLSDAQKRQRYDSGVDLEDLDNDFGGGG 448 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig64990.14089.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig64990.14089.1 >prot_H-elongata_contig64990.14089.1 ID=prot_H-elongata_contig64990.14089.1|Name=mRNA_H-elongata_contig64990.14089.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=205bp QGAIDSWGAALAVDKTNRAFNSKLYCNRAAAFAKLSRHDEAVAESTRALAback to top mRNA from alignment at H-elongata_contig64990:439..3325- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig64990.14089.1 ID=mRNA_H-elongata_contig64990.14089.1|Name=mRNA_H-elongata_contig64990.14089.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2887bp|location=Sequence derived from alignment at H-elongata_contig64990:439..3325- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig64990:439..3325- >mRNA_H-elongata_contig64990.14089.1 ID=mRNA_H-elongata_contig64990.14089.1|Name=mRNA_H-elongata_contig64990.14089.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1230bp|location=Sequence derived from alignment at H-elongata_contig64990:439..3325- (Himanthalia elongata Himel1 dioecious)back to top |