prot_H-elongata_contig64966.14083.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig64966.14083.1
Unique Nameprot_H-elongata_contig64966.14083.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length83
Homology
BLAST of mRNA_H-elongata_contig64966.14083.1 vs. uniprot
Match: D8LJE6_ECTSI (Ankyrin (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJE6_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 5.560e-16
Identity = 43/78 (55.13%), Postives = 52/78 (66.67%), Query Frame = 0
Query:    6 TPLHVASKSSSEDILMEVLRYPDISCNINTFADKTSVTPLHEAAGSSSPGVVRLLLKAGADLTLLSGDRSTALHIACS 83
            TPLHVASK SS+DIL E+L++P+I  +INTF DKT+V                LLL AGAD++  SGD STA HIACS
Sbjct:   46 TPLHVASKGSSQDILRELLKHPEIGRSINTFTDKTNVXXXXXXXXXXXXXXXXLLLDAGADISSPSGDLSTAFHIACS 123          
BLAST of mRNA_H-elongata_contig64966.14083.1 vs. uniprot
Match: A0A6H5JLF8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLF8_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 1.750e-14
Identity = 44/84 (52.38%), Postives = 53/84 (63.10%), Query Frame = 0
Query:    6 TPLHVASKSSSEDILMEVLRYPDISCNINTFADKTSV------TPLHEAAGSSSPGVVRLLLKAGADLTLLSGDRSTALHIACS 83
            TPLHVASK SS+DIL E+L++P+I  +INTF DKT+V      T               LLL AGAD++  SGD STA HIACS
Sbjct:   46 TPLHVASKGSSQDILRELLKHPEIGRSINTFTDKTNVGHAPFVTXXXXXXXXXXXXXXXLLLDAGADISSPSGDLSTAFHIACS 129          
BLAST of mRNA_H-elongata_contig64966.14083.1 vs. uniprot
Match: UPI0013DDAE96 (NF-kappa-B inhibitor cactus isoform X2 n=1 Tax=Drosophila sechellia TaxID=7238 RepID=UPI0013DDAE96)

HSP 1 Score: 57.0 bits (136), Expect = 1.080e-7
Identity = 31/79 (39.24%), Postives = 48/79 (60.76%), Query Frame = 0
Query:    4 GPTPLHVASKSSSEDILMEVLRYPDISCNINTFADKTSVTPLHEAAGSSSPGVVRLLLKAGADLTLLSGDRSTALHIAC 82
            G  PLH+A  S S D++  ++R     C +N   D  + TPLH AA ++ P ++R+LL AGA+ T+     +TALH++C
Sbjct:    3 GDKPLHLACISGSVDVVAALIRMAPHPCLLNIQND-VAQTPLHLAALTAQPNIMRILLLAGAEPTVRDRHGNTALHLSC 80          
BLAST of mRNA_H-elongata_contig64966.14083.1 vs. uniprot
Match: A0A1B0ANE0_9MUSC (Uncharacterized protein n=3 Tax=Nemorhina TaxID=44051 RepID=A0A1B0ANE0_9MUSC)

HSP 1 Score: 50.1 bits (118), Expect = 3.870e-5
Identity = 30/79 (37.97%), Postives = 43/79 (54.43%), Query Frame = 0
Query:    4 GPTPLHVASKSSSEDILMEVLRYPDISCNINTFADKTSVTPLHEAAGSSSPGVVRLLLKAGADLTLLSGDRSTALHIAC 82
            G T LH+A     E+++  +L     SC  +   D     PLH AA +  P ++R+LL AGAD T+     +TALH+AC
Sbjct:  125 GDTFLHLACIMKDENLVKTILSKTPHSCLYDILNDDCQA-PLHLAALTKRPNILRMLLLAGADPTVRDRRGNTALHLAC 202          
BLAST of mRNA_H-elongata_contig64966.14083.1 vs. uniprot
Match: UPI0018CCFFC7 (NF-kappa-B inhibitor cactus n=1 Tax=Teleopsis dalmanni TaxID=139649 RepID=UPI0018CCFFC7)

HSP 1 Score: 50.1 bits (118), Expect = 3.930e-5
Identity = 30/79 (37.97%), Postives = 44/79 (55.70%), Query Frame = 0
Query:    4 GPTPLHVASKSSSEDILMEVLRYPDISCNINTFADKTSVTPLHEAAGSSSPGVVRLLLKAGADLTLLSGDRSTALHIAC 82
            G T LH+A       ++  ++R     C  N   D  S TPLH AA ++ P ++R+LL AGAD T+     +TALH++C
Sbjct:  337 GDTTLHLACIHGYVGVVAALIRMAPHPCLFNIKND-LSQTPLHLAALTAQPKILRMLLIAGADPTIRDRHGNTALHLSC 414          
BLAST of mRNA_H-elongata_contig64966.14083.1 vs. uniprot
Match: A0A1B0G4F4_GLOMM (Cactus n=1 Tax=Glossina morsitans morsitans TaxID=37546 RepID=A0A1B0G4F4_GLOMM)

HSP 1 Score: 49.7 bits (117), Expect = 4.900e-5
Identity = 30/79 (37.97%), Postives = 43/79 (54.43%), Query Frame = 0
Query:    4 GPTPLHVASKSSSEDILMEVLRYPDISCNINTFADKTSVTPLHEAAGSSSPGVVRLLLKAGADLTLLSGDRSTALHIAC 82
            G T LH+A     E+++  +L     SC  +   D     PLH AA +  P ++R+LL AGAD T+     +TALH+AC
Sbjct:  123 GDTFLHLACILKDENLVKTILSKAPHSCLYDILNDDCQA-PLHLAALTKRPNILRMLLLAGADPTVRDRRGNTALHLAC 200          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig64966.14083.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LJE6_ECTSI5.560e-1655.13Ankyrin (Partial) (Fragment) n=1 Tax=Ectocarpus si... [more]
A0A6H5JLF8_9PHAE1.750e-1452.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI0013DDAE961.080e-739.24NF-kappa-B inhibitor cactus isoform X2 n=1 Tax=Dro... [more]
A0A1B0ANE0_9MUSC3.870e-537.97Uncharacterized protein n=3 Tax=Nemorhina TaxID=44... [more]
UPI0018CCFFC73.930e-537.97NF-kappa-B inhibitor cactus n=1 Tax=Teleopsis dalm... [more]
A0A1B0G4F4_GLOMM4.900e-537.97Cactus n=1 Tax=Glossina morsitans morsitans TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 4..19
score: 37.25
coord: 56..70
score: 39.98
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 40..69
e-value: 0.097
score: 21.8
coord: 3..33
e-value: 6.4
score: 15.7
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 40..72
score: 11.274
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..83
e-value: 1.7E-16
score: 62.1
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 3..82
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 4..69
e-value: 2.3E-8
score: 34.5
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 3..83
score: 20.129
NoneNo IPR availablePANTHERPTHR24134:SF1ANKYRIN REPEAT AND SOCS BOX PROTEIN 8coord: 4..82
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 4..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig64966contigH-elongata_contig64966:2007..2255 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig64966.14083.1mRNA_H-elongata_contig64966.14083.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig64966 2007..2255 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig64966.14083.1 ID=prot_H-elongata_contig64966.14083.1|Name=mRNA_H-elongata_contig64966.14083.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=83bp
MTRGPTPLHVASKSSSEDILMEVLRYPDISCNINTFADKTSVTPLHEAAG
SSSPGVVRLLLKAGADLTLLSGDRSTALHIACS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom