prot_H-elongata_contig64879.14077.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig64879.14077.1
Unique Nameprot_H-elongata_contig64879.14077.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length249
Homology
BLAST of mRNA_H-elongata_contig64879.14077.1 vs. uniprot
Match: D7FS39_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS39_ECTSI)

HSP 1 Score: 230 bits (586), Expect = 8.040e-66
Identity = 142/307 (46.25%), Postives = 177/307 (57.65%), Query Frame = 0
Query:    6 KGVILPSDLEQRLCSLASSIRASCARRAPLPNVLLHGAPGSGKSLVARQLAKACGLNIAIVAGGDVGPLGATASSELSGILRWI--TRAGQRGKRGAGVALIMEEAEAALGDRGKVSMSENARSALTAILLHTGEAQPGFMMILTSSRPQDIDEAVLDRVDEVIRMPTPGLAERKELARQYFARYLNHDVPA-------------------------------AGAITI------------------------------RDGHTSGLVRLSENFRSEASSLVETLAVKSEGFHGRDMARFFSAVQVS 249
            + V+LP      L   +S   +S  R APLP+VL+HGAPGSGKS++AR+L   CGLN  +VAGGDVG LG  ASSELSG++RW               VA++M+EAEAALGDR K  MSENARSAL A+LL TGE + GF+M+LT+S PQD+DEA+LDRVDEV+ +PTPG  ER  L RQYF+ YL+HD PA                               A A T                               R G   G+VRLS+ FR++A+ L+  LAV+SEGF+GRDM  FFSAVQ +
Sbjct:  536 RAVLLP------LLGKSSHCSSSYRRGAPLPHVLIHGAPGSGKSVLARRLVGMCGLNTVVVAGGDVGSLGRNASSELSGLMRWAGGXXXXXXXXXXXXVAVVMDEAEAALGDRRKKGMSENARSALNAVLLSTGELRAGFLMVLTTSCPQDLDEAILDRVDEVVHLPTPGFPERARLIRQYFSSYLHHDPPADFLRATAVLGSAEARAEFVESRREGGRPTAMAKAATXXXXXXXXXXXXXQPEAHLPADTTEDEKENPRTGGGGGVVRLSDGFRAKAAGLMAMLAVRSEGFYGRDMEHFFSAVQAA 836          
BLAST of mRNA_H-elongata_contig64879.14077.1 vs. uniprot
Match: A0A6H5L1Y3_9PHAE (AAA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Y3_9PHAE)

HSP 1 Score: 208 bits (530), Expect = 1.120e-59
Identity = 114/197 (57.87%), Postives = 139/197 (70.56%), Query Frame = 0
Query:    3 RALKGVILPSDLEQRLC---SLASSIRASCARRAPLPNVLLHGAPGSGKSLVARQLAKACGLNIAIVAGGDVGPLGATASSELSGILRWI--TRAGQRGKRGAGVALIMEEAEAALGDRGKVSMSENARSALTAILLHTGEAQPGFMMILTSSRPQDIDEAVLDRVDEVIRMPTPGLAERKELARQYFARYLNHDVP 194
            R +   + PS L    C   + A +  +S  R APLPNVL+HGAPGSGKS++AR+L   CGLN  +VAGGDVG LG  ASSELSG++RW               VA++M+EAEAALGDR K  MSENARSAL A+LL TGE + GF+M+LT+SRPQD+DEA+LDRVDEV+ +PTPGL ER  L RQYF  YL+HD P
Sbjct:   61 RDIPHTLAPSRLRALWCFYTTHAVTASSSYRRGAPLPNVLIHGAPGSGKSVLARRLVGMCGLNTVVVAGGDVGSLGRNASSELSGLMRWAGGXXXXXXXXXXXXVAVVMDEAEAALGDRRKKGMSENARSALNAVLLSTGELRAGFLMVLTTSRPQDLDEAILDRVDEVVHLPTPGLPERARLIRQYFCSYLHHDPP 257          
BLAST of mRNA_H-elongata_contig64879.14077.1 vs. uniprot
Match: A0A8J2T0E4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T0E4_9STRA)

HSP 1 Score: 179 bits (453), Expect = 2.510e-48
Identity = 105/248 (42.34%), Postives = 152/248 (61.29%), Query Frame = 0
Query:    7 GVILPSDLEQRLCSLASSIRASCARRAPLPNVLLHGAPGSGKSLVARQLAKACGLNIAIVAGGDVGPLGATASSELSGILRWITRAGQRGKRGAGVALIMEEAEAALGDRGKVSMSENARSALTAILLHTGEAQPGFMMILTSSRPQDIDEAVLDRVDEVIRMPTPGLAERKELARQYFARYLNHDVPAAGAITIRDGHTSGLVRLSENFRS-------EASSLVETLAVKSEGFHGRDMARFFSAVQ 247
            G+ILP DL +RL  LA SIR +   RAPL ++LL G PG+GK++VAR+L++  GL+ AI++GGDVGPLGA AS+E+  IL W  R+ +      G+ L ++EAEAAL DRG+  +SE A SAL A L HT +    FM++L ++RP D+D AVLDRVDE + +P P    R++L   YFA   +   P+     + D       R+ + FR+       +    +  LA K+EG+ GR+ ++   +VQ
Sbjct:  422 GIILPEDLGKRLDQLAKSIRGARKLRAPLRHLLLFGPPGTGKTMVARRLSQISGLDWAIMSGGDVGPLGAAASTEIHAILNWARRSPK------GLLLFVDEAEAALCDRGRPDLSEEAISALNAFLFHTSDPSYTFMLVLATNRPGDLDAAVLDRVDEAVEIPLPDEGAREKLLHLYFAMAFDRPAPSTRLGRLLD-------RILKRFRAPDVCIALDRKEAIRALAKKTEGYSGRECSKLMLSVQ 656          
BLAST of mRNA_H-elongata_contig64879.14077.1 vs. uniprot
Match: A0A7S3JSF0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JSF0_9STRA)

HSP 1 Score: 162 bits (411), Expect = 1.340e-42
Identity = 97/243 (39.92%), Postives = 154/243 (63.37%), Query Frame = 0
Query:    7 GVILPSDLEQRLCSLASSIRASCARRAPLPNVLLHGAPGSGKSLVARQLAKACGLNIAIVAGGDVGPLGATASSELSGILRWITRAGQRGKRGAGVALIMEEAEAALGDRGKVSMSENARSALTAILLHTGEAQPGFMMILTSSRPQDIDEAVLDRVDEVIRMPTPGLAERKELARQYFARYLNHDVPAAGAITIRDGHTSGLVRLSENFRSEASSLVETLAVKSEGFHGRDMARFFSAVQVS 249
            GVIL + +  RL +LA S+R +    APL +++L+G PG+GK+LVAR+LA A GL+ A+ +GGD+GPLG +A++EL  +L W  R+ +      G+ L ++EAEAAL DRG+ ++SE+A SAL A L HT E     +++L ++RP DID AVLDR+DEVI++P P    R +L + YF +    D  A    ++   + +    ++ +F  + S+ +  L   +EGF GR++A+   ++Q +
Sbjct:  389 GVILQNSIGPRLEALAHSLRGARRLHAPLRHIMLYGPPGTGKTLVARKLAAASGLDWAVASGGDIGPLGPSATTELHKLLNWARRSPR------GLLLFLDEAEAALADRGRPNLSEDAVSALNAFLTHTSEPSYSVVLVLATNRPADIDAAVLDRIDEVIQLPLPDSHCRAQLLQLYFDQCFITD-DARMRYSLFTSNRNKRPCIASDF--DVSAHLNDLLPYTEGFSGREIAKLMLSIQAA 622          
BLAST of mRNA_H-elongata_contig64879.14077.1 vs. uniprot
Match: A0A7S3NKV4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NKV4_9STRA)

HSP 1 Score: 162 bits (411), Expect = 3.870e-42
Identity = 94/243 (38.68%), Postives = 142/243 (58.44%), Query Frame = 0
Query:    5 LKGVILPSDLEQRLCSLASSIRASCARRAPLPNVLLHGAPGSGKSLVARQLAKACGLNIAIVAGGDVGPLGATASSELSGILRWITRAGQRGKRGAGVALIMEEAEAALGDRGKVSMSENARSALTAILLHTGEAQPGFMMILTSSRPQDIDEAVLDRVDEVIRMPTPGLAERKELARQYFARYLNHDVPAAGAITIRDGHTSGLVRLSENFRSEASSLVETLAVKSEGFHGRDMARFFSAVQ 247
            L  VIL   +  RL  LASS R +    AP  ++LLHG PG+GK+L A++LA+A  L+ A+++GGDVGPLG    + L  + RW   + +RG     V + ++EAEA L  R K  ++E+ R+AL A L HTG     F+++L ++RP+D+DEAVLDR+D+ + +  PGL+ R  LA  YF +YL    P +    I      G    +     +A + +ET+A  ++GF  R++ +   AVQ
Sbjct:  482 LDDVILTDQVRSRLLQLASSTRNAKRNDAPFRHILLHGPPGTGKTLTAKKLAQASSLDYALMSGGDVGPLGVHGVTALHSLFRW-AHSSERG-----VLIFIDEAEAFLASRDKARLTEHMRNALNAFLYHTGTPGNSFVIVLATNRPEDLDEAVLDRIDDAVEIGLPGLSHRLLLAEMYFNKYLRRSYPKSFFSRIISSCRLGTKYKTITISDDAVAQLETIANLTDGFSAREIEKLMVAVQ 718          
BLAST of mRNA_H-elongata_contig64879.14077.1 vs. uniprot
Match: F0Y3W1_AURAN (AAA domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3W1_AURAN)

HSP 1 Score: 155 bits (393), Expect = 1.060e-41
Identity = 95/251 (37.85%), Postives = 145/251 (57.77%), Query Frame = 0
Query:    5 LKGVILPSDLEQRLCSLASSIRASCARRAPLPNVLLHGAPGSGKSLVARQLAKACGLNIAIVAGGDVGPLGATASSELSGILRWITRAGQRGKRGAGVALIMEEAEAALGDRGKVSMSENARSALTAILLHTGEAQPGFMMILTSSRPQDIDEAVLDRVDEVIRMPTPGLAERKELARQYFARYLNHDVPAAGAITIRDGHTSGLVR--------LSENFRSEASSLVETLAVKSEGFHGRDMARFFSAVQ 247
            L GV+LP+DL +RL  LA++ R + A R+P  ++LLHG PG+GK+LVA++LAKA GL  A+++GGDVGPLG    + L  + RW   + +      GV + ++EAEA L  R    ++E+ R+AL A L  TG     F+++L ++R  D+DEAVLDR DE + +  P LA R+ L   Y+  YL         +  R G  + ++R        L      + ++ +  +A ++EGF GR + + F AVQ
Sbjct:  124 LDGVVLPADLRRRLVQLANATRNAKANRSPFRHMLLHGPPGTGKTLVAKRLAKATGLEYALMSGGDVGPLGPEGVTALHSLFRWSRTSSK------GVLVFIDEAEAFLASRSNGRLTEHMRNALNAFLYQTGSPTSHFVLVLATNRASDLDEAVLDRTDEELYVGLPDLAARRHLVELYYDLYLRK-------LQRRGGRLAAVLRFLGGRPAPLDVGPGVDDAATLGAVAEQTEGFSGRAIEKLFVAVQ 361          
BLAST of mRNA_H-elongata_contig64879.14077.1 vs. uniprot
Match: F0Y2W0_AURAN (AAA domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2W0_AURAN)

HSP 1 Score: 157 bits (397), Expect = 4.800e-41
Identity = 95/250 (38.00%), Postives = 145/250 (58.00%), Query Frame = 0
Query:    5 LKGVILPSDLEQRLCSLASSIRASCARRAPLPNVLLHGAPGSGKSLVARQLAKACGLNIAIVAGGDVGPLGATASSELSGILRWITRAGQRGKRGAGVALIMEEAEAALGDRGKVSMSENARSALTAILLHTGEAQPGFMMILTSSRPQDIDEAVLDRVDEVIRMPTPGLAERKELARQYFARYLNHDVPAAG-------AITIRDGHTSGLVRLSENFRSEASSLVETLAVKSEGFHGRDMARFFSAVQ 247
            L GV+LP DL  R+  LA + R +   RAP  ++LLHG PG+GK+LVA++LAKA GL  A+++GGDVGPLGA   + L  + RW   +        GV + ++EAEA L  R +  ++E+ R+AL A L  TG     F+++L ++R +D+DEAVLDRVDE +    P L  R+ LA  Y+ARY+   V A         A+T      +    +++       ++++ +A  ++ F GR++ + F AVQ
Sbjct:  266 LDGVVLPGDLRTRVLQLAVATRNAKRNRAPFRHMLLHGPPGTGKTLVAKRLAKASGLEYALMSGGDVGPLGADGVTALHTLFRWARTSD------TGVLIFIDEAEAFLASRSRSKLTEHMRNALNAFLYQTGSPTKSFILVLATNRAEDLDEAVLDRVDETLYFGLPALPARRSLAALYYARYVTSLVYAPSRFRALLRALTFAPAALAVAPDVTD-------AVLDDVAKLTDDFSGREIEKLFVAVQ 502          
BLAST of mRNA_H-elongata_contig64879.14077.1 vs. uniprot
Match: UPI00125DB752 (ATPase family AAA domain-containing protein 3 n=2 Tax=Ipomoea TaxID=4119 RepID=UPI00125DB752)

HSP 1 Score: 157 bits (396), Expect = 1.390e-40
Identity = 88/247 (35.63%), Postives = 145/247 (58.70%), Query Frame = 0
Query:    3 RALKGVILPSDLEQRLCSLASSIRASCARRAPLPNVLLHGAPGSGKSLVARQLAKACGLNIAIVAGGDVGPLGATASSELSGILRWITRAGQRGKRGAGVALIMEEAEAALGDRGKVSMSENARSALTAILLHTGEAQPGFMMILTSSRPQDIDEAVLDRVDEVIRMPTPGLAERKELARQYFARYLNHDVPAAGAITIRDGHTSGLVRLSENFRSEASSLVETLAVKSEGFHGRDMARFFSAVQVS 249
            + L  V+L   L++R+  L  ++  + A +AP  NVL HG PG+GK+LVAR++A++ GL+ A++ GGDV PLG  A +++  +  W  ++ +      G+ L ++EA+A L +R K  MSE  RSAL A+L  TG+     ++ L ++RP D+D AV DR+DEV+  P PG +ER EL + Y  +Y+         I  R    +  + +    +     +++  AVK+EGF GR++A+  ++VQ +
Sbjct:  359 KGLDDVVLNPSLKKRVSQLVRTMTYTKAHQAPFRNVLFHGPPGTGKTLVAREIARSSGLDYALMTGGDVAPLGPQAVTKIHQLFDWAKKSNK------GLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTGDQSKDIVLALATNRPGDLDSAVTDRIDEVLEFPLPGESERFELLKLYLDKYIAQAGARKAGIVTRFRKQTQKIEI----KGLTDDILKEAAVKTEGFSGREIAKLMASVQAA 595          
BLAST of mRNA_H-elongata_contig64879.14077.1 vs. uniprot
Match: A0A812LTK1_9DINO (Atad3 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812LTK1_9DINO)

HSP 1 Score: 154 bits (388), Expect = 3.850e-40
Identity = 96/246 (39.02%), Postives = 148/246 (60.16%), Query Frame = 0
Query:    4 ALKGVILPSDLEQRLCSLASSIRASCARRAPLPNVLLHGAPGSGKSLVARQLAKACGLNIAIVAGGDVGPLGATASSELSGILRWITRAGQRGKRGAGVALIMEEAEAALGDRGKVSMSENARSALTAILLHTGEAQPGFMMILTSSRPQDIDEAVLDRVDEVIRMPTPGLAERKELARQYFARYLNHDVPAAGAIT--IRDGHTSGLVRLSENFRSEASSLVETLAVKSEGFHGRDMARFFSAVQ 247
            +L  VIL  D+  R+  LA + R + A  AP  +++ +G PG+GK+++A++LA++ G++ AI++GGDVGPLG  A +EL  +  +  R+ QRG     + L ++EA+A L  R K +MSE  R+AL A+L  TGEA   FMM+L ++RP D+D AVLDR DE +    P    RK L RQYF +Y+  D  ++G+    +     S  + L   F  E    ++ +A ++EGF GR +A+   +VQ
Sbjct:  210 SLTDVILRKDIADRVQRLAVATRNTRANGAPYRHMMFYGPPGTGKTMLAKRLARSSGMDYAIMSGGDVGPLGKEAVTELHRLFDYAERS-QRG-----MLLFIDEADAFLASRSKAAMSEEQRNALNALLFRTGEASDRFMMVLATNRPGDLDSAVLDRTDESLLFDLPDAEARKALVRQYFKKYIT-DAGSSGSGVGGLMGFKRSAKIILDSGFSDE---WLDRVAERTEGFSGRGIAKLMLSVQ 445          
BLAST of mRNA_H-elongata_contig64879.14077.1 vs. uniprot
Match: A0A7S1CAP0_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CAP0_9STRA)

HSP 1 Score: 153 bits (386), Expect = 4.600e-40
Identity = 93/256 (36.33%), Postives = 145/256 (56.64%), Query Frame = 0
Query:    2 PRALKGVILPSDLEQRLCSLASSIRASCARRAPLPNVLLHGAPGSGKSLVARQLAKACGLNIAIVAGGDVGPLGATASSELSGILRWITRAGQRGKRGAGVALIMEEAEAALGDRGKVSMSENARSALTAILLHTGEAQPGFMMILTSSRPQDIDEAVLDRVDEVIRMPTPGLAERKELARQYFARYLNHDVPAAGAITIRDGHTSGLVRLSENFRSEASSL----------VETLAVKSEGFHGRDMARFFSAVQ 247
            P   + V+LP +L +++  LA S R +    APL +VL +G PG+GK++VA +LA+ CGL+ A+++GGDV PLG+ A +EL  +  W    G+      G+ L ++E +A LG R +V +SE+ R+AL A+L  TG     FM+++ ++RP D+D AV DR+DE +    P L  R++L RQYF  YL           +R G  +G   L   F+  A+ +             LA ++EGF GR +++   +VQ
Sbjct:  172 PTGFEDVVLPEELAEQVHRLALSTRNAKLNHAPLRHVLFYGPPGTGKTMVAMRLARHCGLDYAVMSGGDVAPLGSNAVTELHKLFDWANTTGR------GLLLFIDEGDAFLGSRARVGLSEDQRNALNALLYRTGTPTSKFMLVVATNRPGDLDAAVTDRIDEAMWFGLPDLELREKLLRQYFGEYL-----------VRAGEKAG-TGLVGAFKKRAARIDVAADIDDAYFADLARRTEGFSGRGISKLMLSVQ 409          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig64879.14077.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS39_ECTSI8.040e-6646.25AAA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L1Y3_9PHAE1.120e-5957.87AAA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A8J2T0E4_9STRA2.510e-4842.34Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3JSF0_9STRA1.340e-4239.92Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S3NKV4_9STRA3.870e-4238.68Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
F0Y3W1_AURAN1.060e-4137.85AAA domain-containing protein (Fragment) n=1 Tax=A... [more]
F0Y2W0_AURAN4.800e-4138.00AAA domain-containing protein (Fragment) n=1 Tax=A... [more]
UPI00125DB7521.390e-4035.63ATPase family AAA domain-containing protein 3 n=2 ... [more]
A0A812LTK1_9DINO3.850e-4039.02Atad3 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A7S1CAP0_9STRA4.600e-4036.33Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 34..173
e-value: 7.7E-8
score: 42.1
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 38..170
e-value: 1.1E-14
score: 55.0
NoneNo IPR availableGENE3D3.40.50.300coord: 3..189
e-value: 4.8E-24
score: 86.7
NoneNo IPR availablePANTHERPTHR23075:SF0ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 3coord: 4..247
IPR039188ATPase family AAA domain-containing protein 3PANTHERPTHR23075PUTATIVE ATP-ASEcoord: 4..247
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 31..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig64879contigH-elongata_contig64879:163..1879 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig64879.14077.1mRNA_H-elongata_contig64879.14077.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig64879 163..1879 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig64879.14077.1 ID=prot_H-elongata_contig64879.14077.1|Name=mRNA_H-elongata_contig64879.14077.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=249bp
LPRALKGVILPSDLEQRLCSLASSIRASCARRAPLPNVLLHGAPGSGKSL
VARQLAKACGLNIAIVAGGDVGPLGATASSELSGILRWITRAGQRGKRGA
GVALIMEEAEAALGDRGKVSMSENARSALTAILLHTGEAQPGFMMILTSS
RPQDIDEAVLDRVDEVIRMPTPGLAERKELARQYFARYLNHDVPAAGAIT
IRDGHTSGLVRLSENFRSEASSLVETLAVKSEGFHGRDMARFFSAVQVS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR003959ATPase_AAA_core
IPR039188ATAD3
IPR027417P-loop_NTPase