prot_H-elongata_contig64874.14076.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig64874.14076.1
Unique Nameprot_H-elongata_contig64874.14076.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length294
Homology
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BLAST of mRNA_H-elongata_contig64874.14076.1 vs. uniprot
Match: D7FS81_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS81_ECTSI)

HSP 1 Score: 111 bits (278), Expect = 1.640e-24
Identity = 117/326 (35.89%), Postives = 138/326 (42.33%), Query Frame = 0 
Query:   12 GDADCWTPDWALSLEDRFQRKVEAWLRRPSRAKQQ-----------------AETA-------------AAKFLPPGLAFVPTVDVRGAMD------AQAACVKVRQKDPWAS-LAELGVRPRAAPRPSARTRRSGGCGRCRYLR-GSPGSTHQMILGLGKRRFPSRHSIFSAPDSTSAGSTRGG-------------EDEDFASAKDVDARTVEKLEATSRSL--EDPKPRRDASEGVLSSVLGGAADAYDSAMSFVGWALVTLPLGKRCLS-AYDNLITVPASTIDHGSTDVSGDGVDMSGGGGGYNLVGISNIDPFEASGRRG 283
            G  D +TPDWA +LE RF   V AWLR+      Q                 A TA             A +    G+AFVPT   RG +       + +  +  RQ+  W S LAE+G  PR       R     GC R R  R GS G+   ++     R FP R  IF                           +DE    A      + E LE   R L          +   VLS+ LGGAADAYDSA+ FVG ALVT PLGKR LS A D   TV  STI        G   DM+ G   Y+LVG SNIDPFEASGR G
Sbjct:   86 GVDDNYTPDWAPTLEQRFHSTVVAWLRKGGSTADQDKPATTTGATHTNAGSTANTASXXXXXXXXXXMAAVRVATRGMAFVPTPHTRGRVTGVHRRASTSGALTARQR--WVSPLAEVGSNPR-------RCSECSGCRRLRSARRGSAGNPQMLLSRFRGRGFPLRRGIFGGASEADGXXXXXXXXXXXXXXXEDCVQDEIRDQAAATTYNSAETLEGPERPLTGNGDSGGGGSRSSVLSTFLGGAADAYDSALDFVGCALVTSPLGKRYLSGASDGYNTV--STIRR----TGGGPADMNSGSA-YDLVGFSNIDPFEASGRGG 395
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig64874.14076.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FS81_ECTSI1.640e-2435.89Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig64874contigH-elongata_contig64874:2034..2915 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig64874.14076.1mRNA_H-elongata_contig64874.14076.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig64874 2..3006 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig64874.14076.1 ID=prot_H-elongata_contig64874.14076.1|Name=mRNA_H-elongata_contig64874.14076.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=294bp
MKTGVPEDLIKGDADCWTPDWALSLEDRFQRKVEAWLRRPSRAKQQAETA
AAKFLPPGLAFVPTVDVRGAMDAQAACVKVRQKDPWASLAELGVRPRAAP
RPSARTRRSGGCGRCRYLRGSPGSTHQMILGLGKRRFPSRHSIFSAPDST
SAGSTRGGEDEDFASAKDVDARTVEKLEATSRSLEDPKPRRDASEGVLSS
VLGGAADAYDSAMSFVGWALVTLPLGKRCLSAYDNLITVPASTIDHGSTD
VSGDGVDMSGGGGGYNLVGISNIDPFEASGRRGRRTSSRLLVH*
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