prot_H-elongata_contig64834.14072.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig64834.14072.1
Unique Name	prot_H-elongata_contig64834.14072.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	170

Homology

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BLAST of mRNA_H-elongata_contig64834.14072.1 vs. uniprot
Match: A0A6H5K0W6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0W6_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 7.000e-26
Identity = 68/176 (38.64%), Postives = 99/176 (56.25%), Query Frame = 0

Query:    2 ARSKELVVATWNVRTMSERGTNGPGY-AEDLLMFAAKYECDFIAIQETRRDGRTTIQAPAAGYVVYCSGHCDSDGGKPGILEVGLAVRESIARALGPDGIVPEHISARLLKVKVIFKHRAVITFIVGYALAETAATCH------KSKFWKELRSTIAEVPAIDHLILMMDANARTG 170
            AR  +L   T+NVRT++  G N  G+    ++   +   CD I +QETRR+G+ +I     GYV+  SG       K G+  VG+A++E +  ++G +G   E  S RL+KV++       +TF+VGYAL ET  T        K  FW  L + I EV + DHL+++MDANARTG
Sbjct:  815 AREGDLSFGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEVMWESVGEEGRTVECSSPRLMKVRLQIGRTCRVTFVVGYALTETVRTTAGRDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTG 988

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BLAST of mRNA_H-elongata_contig64834.14072.1 vs. uniprot
Match: A0A6H5K3Q1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q1_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 7.500e-26
Identity = 68/176 (38.64%), Postives = 99/176 (56.25%), Query Frame = 0

Query:    2 ARSKELVVATWNVRTMSERGTNGPGY-AEDLLMFAAKYECDFIAIQETRRDGRTTIQAPAAGYVVYCSGHCDSDGGKPGILEVGLAVRESIARALGPDGIVPEHISARLLKVKVIFKHRAVITFIVGYALAETAATCH------KSKFWKELRSTIAEVPAIDHLILMMDANARTG 170
            AR  +L   T+NVRT++  G N  G+    ++   +   CD I +QETRR G+ +I     GYV+  SG       K G+  VG+A++E++  ++G +G   E IS RL+KV++       +TF+VGYA  ET  T        K  FW  L + I EV + DHL+++MDANARTG
Sbjct:  170 AREGDLSFGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFLVGYAPTETVRTTEGCDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTG 343

[Close]

BLAST of mRNA_H-elongata_contig64834.14072.1 vs. uniprot
Match: A0A6H5JMB4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMB4_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 1.120e-25
Identity = 68/176 (38.64%), Postives = 99/176 (56.25%), Query Frame = 0

Query:    2 ARSKELVVATWNVRTMSERGTNGPGY-AEDLLMFAAKYECDFIAIQETRRDGRTTIQAPAAGYVVYCSGHCDSDGGKPGILEVGLAVRESIARALGPDGIVPEHISARLLKVKVIFKHRAVITFIVGYALAETAATCH------KSKFWKELRSTIAEVPAIDHLILMMDANARTG 170
            AR  +L   T+NVRT++  G N  G+    ++   +   CD I +QETRR G+ +I     GYV+  SG       K G+  VG+A++E++  ++G +G   E IS RL+KV++       +TF+VGYA  ET  T        K  FW  L + I EV + DHL+++MDANARTG
Sbjct:   81 AREGDLSFGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTG 254

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BLAST of mRNA_H-elongata_contig64834.14072.1 vs. uniprot
Match: A0A6H5JQH5_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQH5_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 1.770e-25
Identity = 69/176 (39.20%), Postives = 98/176 (55.68%), Query Frame = 0

Query:    2 ARSKELVVATWNVRTMSERGTNGPGY-AEDLLMFAAKYECDFIAIQETRRDGRTTIQAPAAGYVVYCSGHCDSDGGKPGILEVGLAVRESIARALGPDGIVPEHISARLLKVKVIFKHRAVITFIVGYALAETAATCH------KSKFWKELRSTIAEVPAIDHLILMMDANARTG 170
            AR  +L   T+NVRT++  G N  G+    ++   A  +CD I +QETRR G+  I     GYV+  SG       K G+  VG+A++E++  ++G  G   E IS RL+KV++       +TF+VGYA  ETA          K  FW  L + I EV + DHL+++MDANARTG
Sbjct:   85 AREGDLSFGTFNVRTLAYSGRNPIGHNVMTVMQICAATDCDVIGLQETRRAGQGAITHD--GYVIIWSGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTG 258

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BLAST of mRNA_H-elongata_contig64834.14072.1 vs. uniprot
Match: A0A6H5K6P8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6P8_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 1.790e-25
Identity = 66/176 (37.50%), Postives = 98/176 (55.68%), Query Frame = 0

Query:    2 ARSKELVVATWNVRTMSERGTNGPGY-AEDLLMFAAKYECDFIAIQETRRDGRTTIQAPAAGYVVYCSGHCDSDGGKPGILEVGLAVRESIARALGPDGIVPEHISARLLKVKVIFKHRAVITFIVGYALAETAATCH------KSKFWKELRSTIAEVPAIDHLILMMDANARTG 170
            AR  +L   T+N+RT+     N  G+    ++   +   CD + +QE RRDG+ +I  P  GYV+  SG       K G+  VG+A++E++  ++G +G   E IS RL+KV++       +TF+VGYA  ET  T        K  FW  L + I EV + DHL+++MDANARTG
Sbjct:   20 AREGDLSFGTFNLRTLHYSDRNPIGHNVMTVMQICSATGCDVVGLQENRRDGQGSI--PHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLLVLMDANARTG 193

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BLAST of mRNA_H-elongata_contig64834.14072.1 vs. uniprot
Match: A0A6H5L660_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L660_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 3.030e-25
Identity = 67/176 (38.07%), Postives = 98/176 (55.68%), Query Frame = 0

Query:    2 ARSKELVVATWNVRTMSERGTNGPGY-AEDLLMFAAKYECDFIAIQETRRDGRTTIQAPAAGYVVYCSGHCDSDGGKPGILEVGLAVRESIARALGPDGIVPEHISARLLKVKVIFKHRAVITFIVGYALAETAATCH------KSKFWKELRSTIAEVPAIDHLILMMDANARTG 170
            AR  +L   T+NVRT++  G N  G+    ++   +   CD I +QETRR+G+ +I     GYV+  SG       K G+  VG+A++E++  ++G +G   E I  RL+KV++       ITF+V YA  ET  T        K  FW  L + I EV + DHL+++MDANARTG
Sbjct:  143 AREGDLSFGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKETMWESVGEEGRKVECIGPRLMKVRLRIGRTCGITFVVRYAPTETVRTTAGGDINAKDSFWTALDAVIREVHSHDHLVVLMDANARTG 316

[Close]

BLAST of mRNA_H-elongata_contig64834.14072.1 vs. uniprot
Match: A0A6H5K5A7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A7_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 6.120e-25
Identity = 67/176 (38.07%), Postives = 99/176 (56.25%), Query Frame = 0

Query:    2 ARSKELVVATWNVRTMSERGTNGPGY-AEDLLMFAAKYECDFIAIQETRRDGRTTIQAPAAGYVVYCSGHCDSDGGKPGILEVGLAVRESIARALGPDGIVPEHISARLLKVKVIFKHRAVITFIVGYALAETAATCH------KSKFWKELRSTIAEVPAIDHLILMMDANARTG 170
            AR  +L   T+NVRT++  G N  G+    ++   +   CD I +QETRR+G+ +I     GYV+  SG       K G+  VG+A++E++  ++G +G   E IS RL+KV++   H   +  +VGYA  ET  T        K  FW  L + I EV + DHL+++MDANARTG
Sbjct:  128 AREGDLSFGTFNVRTLAYSGRNPIGHNVMTVMQIWSATGCDVIGLQETRREGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGHTCGVISVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTG 301

[Close]

BLAST of mRNA_H-elongata_contig64834.14072.1 vs. uniprot
Match: A0A6H5J6W7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6W7_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 1.980e-24
Identity = 65/176 (36.93%), Postives = 98/176 (55.68%), Query Frame = 0

Query:    2 ARSKELVVATWNVRTMSERGTNGPGY-AEDLLMFAAKYECDFIAIQETRRDGRTTIQAPAAGYVVYCSGHCDSDGGKPGILEVGLAVRESIARALGPDGIVPEHISARLLKVKVIFKHRAVITFIVGYALAETAATCH------KSKFWKELRSTIAEVPAIDHLILMMDANARTG 170
            AR  +L   T+NVRT++  G N  G+    ++   +   CD + + ETRR+G+ +I     GYV+  SG       K G+  +G+A++E +  ++G +G   E IS RL+KV++       +TF+VGYA  ET  T        K  FW  L + I EV + DHL+++MDANARTG
Sbjct:   32 AREGDLSFGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVVGLHETRREGQGSIAHD--GYVIIWSGARAGTKEKRGVHGMGIAIKEVMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTG 205

[Close]

BLAST of mRNA_H-elongata_contig64834.14072.1 vs. uniprot
Match: A0A6H5JGX2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGX2_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 5.100e-24
Identity = 65/176 (36.93%), Postives = 97/176 (55.11%), Query Frame = 0

Query:    2 ARSKELVVATWNVRTMSERGTNGPGY-AEDLLMFAAKYECDFIAIQETRRDGRTTIQAPAAGYVVYCSGHCDSDGGKPGILEVGLAVRESIARALGPDGIVPEHISARLLKVKVIFKHRAVITFIVGYALAETAATCH------KSKFWKELRSTIAEVPAIDHLILMMDANARTG 170
            AR  +L    +NVRT++  G    G+    ++   +   CD I +QETRR+G+ +I     GYV+  SG       K G+  VG+A++E++  ++G +G   E IS RL+KV++       +TF+VGYA  ET  T        K  FW  L + I EV + DHL+++MDANART 
Sbjct:   54 AREGDLSFGAFNVRTLAYSGRKPIGHNVMTIMQICSATGCDVIGLQETRREGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTA 227

[Close]

BLAST of mRNA_H-elongata_contig64834.14072.1 vs. uniprot
Match: A0A6H5K1H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H7_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 5.220e-24
Identity = 66/176 (37.50%), Postives = 98/176 (55.68%), Query Frame = 0

Query:    2 ARSKELVVATWNVRTMSERGTNGPGY-AEDLLMFAAKYECDFIAIQETRRDGRTTIQAPAAGYVVYCSGHCDSDGGKPGILEVGLAVRESIARALGPDGIVPEHISARLLKVKVIFKHRAVITFIVGYALAETAATCH------KSKFWKELRSTIAEVPAIDHLILMMDANARTG 170
            AR  +L   T+NV T++  G N  G+    ++   +   CD I +QETRR+G+ +I     GYV+  SG       K G+  VG+A++E++  ++G +G   E IS RL+KV++       +TF+V YA  ET  T        K  FW  L + I EV + DHL+++MDANARTG
Sbjct:  652 AREGDLSFGTFNVCTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVRYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTG 825

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig64834.14072.1 vs. uniprot

BLAST of mRNA_H-elongata_contig64834.14072.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5K0W6_9PHAE	7.000e-26	38.64	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5K3Q1_9PHAE	7.500e-26	38.64	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5JMB4_9PHAE	1.120e-25	38.64	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5JQH5_9PHAE	1.770e-25	39.20	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5K6P8_9PHAE	1.790e-25	37.50	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L660_9PHAE	3.030e-25	38.07	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K5A7_9PHAE	6.120e-25	38.07	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5J6W7_9PHAE	1.980e-24	36.93	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JGX2_9PHAE	5.100e-24	36.93	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K1H7_9PHAE	5.220e-24	37.50	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10		coord: 2..170 e-value: 2.8E-12 score: 48.9
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 4..168

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig64834	contig	H-elongata_contig64834:2916..3425 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig64834.14072.1	mRNA_H-elongata_contig64834.14072.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig64834 2916..3425 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig64834.14072.1 ID=prot_H-elongata_contig64834.14072.1|Name=mRNA_H-elongata_contig64834.14072.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=170bp
AARSKELVVATWNVRTMSERGTNGPGYAEDLLMFAAKYECDFIAIQETRR
DGRTTIQAPAAGYVVYCSGHCDSDGGKPGILEVGLAVRESIARALGPDGI
VPEHISARLLKVKVIFKHRAVITFIVGYALAETAATCHKSKFWKELRSTI
AEVPAIDHLILMMDANARTG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036691	Endo/exonu/phosph_ase_sf