prot_H-elongata_contig6479.14069.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig6479.14069.1
Unique Nameprot_H-elongata_contig6479.14069.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length120
Homology
BLAST of mRNA_H-elongata_contig6479.14069.1 vs. uniprot
Match: A0A7J5XQP8_DISMA (Smu-1 suppressor of mec-8 and unc-52 protein homolog n=1 Tax=Dissostichus mawsoni TaxID=36200 RepID=A0A7J5XQP8_DISMA)

HSP 1 Score: 99.0 bits (245), Expect = 1.710e-22
Identity = 84/113 (74.34%), Postives = 94/113 (83.19%), Query Frame = 0
Query:    1 MHDEAVLSGTFSRDGEHLATGSTDGKIKVWKISTGQCLRRFEIAHTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFRGHTSYVNTAVYMLDGGKVVTGSADGTVK 113
            M D+AVL   FSRD E LATG+ DGKIKVWKI +GQCLRRFE AH++   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFRGHTS+VN A +  DG  V++ S+DGTVK
Sbjct:  175 MMDDAVLCMGFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFRGHTSFVNEATFTPDGHHVISASSDGTVK 287          
BLAST of mRNA_H-elongata_contig6479.14069.1 vs. uniprot
Match: A0A2C6KMV8_9APIC (WD40 repeat-containing protein SMU1 n=1 Tax=Cystoisospora suis TaxID=483139 RepID=A0A2C6KMV8_9APIC)

HSP 1 Score: 95.5 bits (236), Expect = 1.320e-21
Identity = 69/114 (60.53%), Postives = 83/114 (72.81%), Query Frame = 0
Query:    1 MHDEAVLSGTFSRDGEHLATGSTDGKIKVWKISTGQCLRRFEIAHTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFRGHTSYVNTAVYMLDGGKVVTGSADGTVKV 114
            MH+ AV++  FSRD E LATGS DG++KVW ++TGQC R+F+ AH  XXXXXXXXXXXXXXXXXXXX              KEFRGH ++VN A+Y+ D  +VVTGSADG VKV
Sbjct:    2 MHETAVVAVEFSRDSEVLATGSQDGQLKVWLVATGQCARKFDRAHDXXXXXXXXXXXXXXXXXXXXXTTARIHGLKSGKTLKEFRGHLTFVNCALYLPDNTRVVTGSADGRVKV 115          
BLAST of mRNA_H-elongata_contig6479.14069.1 vs. uniprot
Match: A0A067BYK7_SAPPC (WD40 repeat-containing protein SMU1 n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BYK7_SAPPC)

HSP 1 Score: 95.1 bits (235), Expect = 3.260e-21
Identity = 77/114 (67.54%), Postives = 86/114 (75.44%), Query Frame = 0
Query:    1 MHDEAVLSGTFSRDGEHLATGSTDGKIKVWKISTGQCLRRFEIAHTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFRGHTSYVNTAVYMLDGGKVVTGSADGTVKV 114
            MH+  V +  FSRDG+ LAT S DGK+KVWK+STGQCLRRFE AH        XXXXXXXXXXXXXXXXXXXXXXXXXXXX EF GH  YVN AV+  D  KV++ S DGT+KV
Sbjct:   35 MHEVGVSAEAFSRDGDLLATASVDGKVKVWKLSTGQCLRRFEHAHGNSIHSICXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFHGHDGYVNHAVFSTDASKVISASCDGTLKV 148          
BLAST of mRNA_H-elongata_contig6479.14069.1 vs. uniprot
Match: A0A0R3XAU4_HYDTA (WD_REPEATS_REGION domain-containing protein n=1 Tax=Hydatigena taeniaeformis TaxID=6205 RepID=A0A0R3XAU4_HYDTA)

HSP 1 Score: 92.8 bits (229), Expect = 1.230e-20
Identity = 48/112 (42.86%), Postives = 61/112 (54.46%), Query Frame = 0
Query:    3 DEAVLSGTFSRDGEHLATGSTDGKIKVWKISTGQCLRRFEIAHTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFRGHTSYVNTAVYMLDGGKVVTGSADGTVKV 114
            D AVL   FSRD E LA+GS DGK+K+W+I +GQCLRRFE AHT+                                  KEF GHT +VN  V+  DG  V++GSADG+V++
Sbjct:    2 DTAVLCLAFSRDSELLASGSMDGKVKIWRIQSGQCLRRFEKAHTKGVTAAHFSMDNVQLLTASYDHTIRIHGMKSGNLLKEFVGHTGFVNDVVFSPDGRHVLSGSADGSVRI 113          
BLAST of mRNA_H-elongata_contig6479.14069.1 vs. uniprot
Match: A0A7S2P5I5_9STRA (WD40 repeat-containing protein SMU1 n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P5I5_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 6.320e-19
Identity = 81/114 (71.05%), Postives = 96/114 (84.21%), Query Frame = 0
Query:    1 MHDEAVLSGTFSRDGEHLATGSTDGKIKVWKISTGQCLRRFEIAHTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFRGHTSYVNTAVYMLDGGKVVTGSADGTVKV 114
            +HD AVL+  FSRDGE LATGS+DG ++VWKI TG+CLR+FE AH+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   RGHTSY+NT  Y+ +  K+ T +ADGTV++
Sbjct:  166 LHDTAVLAINFSRDGEMLATGSSDGMVRVWKIMTGKCLRQFEHAHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGHTSYINTCTYVNEM-KIATSAADGTVRI 278          
BLAST of mRNA_H-elongata_contig6479.14069.1 vs. uniprot
Match: A0A7S2UR72_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UR72_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 7.270e-19
Identity = 63/132 (47.73%), Postives = 73/132 (55.30%), Query Frame = 0
Query:    1 MHDEAVLSGTFSRDGEHLATGSTDGKIKVWKISTGQCLRRFEIAHTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFRGHTSYVNTAVYMLDGGK------------------VVTGSADGTVKV 114
            +H+ AVL+ T + DG  L +GS DG IKVWKI+TG CLR+ + AH            XXXXXXXXXXX             KEFRGHTSYVNT  Y LD G+                  VVTGSADGTV+V
Sbjct:  120 LHETAVLALTVTADGTMLCSGSVDGTIKVWKIATGTCLRQMDRAHAGAISCVAFSPDXXXXXXXXXXXTCREFGLRASRMLKEFRGHTSYVNTCAYALDNGRNSNSXXXXXXXXXGPNLLVVTGSADGTVRV 251          
BLAST of mRNA_H-elongata_contig6479.14069.1 vs. uniprot
Match: A7AQS6_BABBO (WD40 repeat-containing protein SMU1 n=1 Tax=Babesia bovis TaxID=5865 RepID=A7AQS6_BABBO)

HSP 1 Score: 90.1 bits (222), Expect = 1.240e-18
Identity = 44/114 (38.60%), Postives = 59/114 (51.75%), Query Frame = 0
Query:    1 MHDEAVLSGTFSRDGEHLATGSTDGKIKVWKISTGQCLRRFEIAHTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFRGHTSYVNTAVYMLDGGKVVTGSADGTVKV 114
            +HD  ++S   SRD E LA+G  DG IK+WKI+TG+C+R+ + AH                                    KEF+GH S VN A+Y  DG KV+TGS+DG +KV
Sbjct:  273 LHDTLIVSLAVSRDSEILASGDKDGNIKIWKIATGECMRKMDNAHDGAVTCMTFSRNSMSLLTGSFDKTAKIHGLKSGRSIKEFKGHHSIVNAAIYSYDGNKVITGSSDGYIKV 386          
BLAST of mRNA_H-elongata_contig6479.14069.1 vs. uniprot
Match: A0A7S0WFI9_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0WFI9_9CRYP)

HSP 1 Score: 88.2 bits (217), Expect = 2.380e-18
Identity = 44/114 (38.60%), Postives = 59/114 (51.75%), Query Frame = 0
Query:    1 MHDEAVLSGTFSRDGEHLATGSTDGKIKVWKISTGQCLRRFEIAHTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFRGHTSYVNTAVYMLDGGKVVTGSADGTVKV 114
            MH++AVLS  +S+D E +ATG   GKIK+WK+ TGQC+R+FE AH Q                                  KE RGH+SY+N   Y  DG ++ +  +DG VKV
Sbjct:  156 MHEDAVLSLAWSKDSEIVATGDQAGKIKIWKVRTGQCVRKFERAHVQGVTCLAFSRDSTQLCSASYDASMRMHGLKSGKTLKEMRGHSSYINHCSYTADGLRICSSGSDGWVKV 269          
BLAST of mRNA_H-elongata_contig6479.14069.1 vs. uniprot
Match: A0A812D2T2_SEPPH (SMU1 n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812D2T2_SEPPH)

HSP 1 Score: 87.0 bits (214), Expect = 1.390e-17
Identity = 79/119 (66.39%), Postives = 92/119 (77.31%), Query Frame = 0
Query:    1 MHDEAVLSGTFSRDGEHLATGSTDGKIKVWKISTGQCLRRFEIAHTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFRGHTSYVNTAVYMLDGGKVVTGSADGTVKVNKYFF 119
            M D+AVL   FSRD E LATGS DGKIKVWK+ TGQCLR+FE AH +   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  FRGH+S+VN AV+  DG  +++ S+      N++FF
Sbjct:  225 MMDDAVLCMCFSRDSEMLATGSQDGKIKVWKLLTGQCLRKFERAHAKGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFRGHSSFVNDAVFTQDGHHIISASS------NRHFF 337          
BLAST of mRNA_H-elongata_contig6479.14069.1 vs. uniprot
Match: A0A6P6RSL7_9EIME (FACT complex subunit n=1 Tax=Cyclospora cayetanensis TaxID=88456 RepID=A0A6P6RSL7_9EIME)

HSP 1 Score: 86.3 bits (212), Expect = 3.160e-17
Identity = 60/114 (52.63%), Postives = 79/114 (69.30%), Query Frame = 0
Query:    1 MHDEAVLSGTFSRDGEHLATGSTDGKIKVWKISTGQCLRRFEIAHTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFRGHTSYVNTAVYMLDGGKVVTGSADGTVKV 114
            MH+ AV++  FSRD E LATGS  G++KVW ++TGQC+++ + A   XXXXXXXXXXXXXXXXXX                KEFRGH ++VN A+Y+ D  +++TGSADG VK+
Sbjct:  111 MHETAVVAIAFSRDSEALATGSQTGQLKVWLVATGQCIKKIDKAXXXXXXXXXXXXXXXXXXXXXFDTTARIHGLKAGKTLKEFRGHLTFVNCAIYLPDNSRILTGSADGKVKL 224          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6479.14069.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7J5XQP8_DISMA1.710e-2274.34Smu-1 suppressor of mec-8 and unc-52 protein homol... [more]
A0A2C6KMV8_9APIC1.320e-2160.53WD40 repeat-containing protein SMU1 n=1 Tax=Cystoi... [more]
A0A067BYK7_SAPPC3.260e-2167.54WD40 repeat-containing protein SMU1 n=1 Tax=Saprol... [more]
A0A0R3XAU4_HYDTA1.230e-2042.86WD_REPEATS_REGION domain-containing protein n=1 Ta... [more]
A0A7S2P5I5_9STRA6.320e-1971.05WD40 repeat-containing protein SMU1 n=1 Tax=Leptoc... [more]
A0A7S2UR72_9STRA7.270e-1947.73Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A7AQS6_BABBO1.240e-1838.60WD40 repeat-containing protein SMU1 n=1 Tax=Babesi... [more]
A0A7S0WFI9_9CRYP2.380e-1838.60Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A812D2T2_SEPPH1.390e-1766.39SMU1 n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0... [more]
A0A6P6RSL7_9EIME3.160e-1752.63FACT complex subunit n=1 Tax=Cyclospora cayetanens... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 34..74
e-value: 1.3E-6
score: 38.0
coord: 2..31
e-value: 0.48
score: 19.0
coord: 77..116
e-value: 3.2E-5
score: 33.3
IPR001680WD40 repeatPFAMPF00400WD40coord: 35..72
e-value: 1.7E-5
score: 25.5
coord: 79..114
e-value: 0.001
score: 19.8
coord: 11..31
e-value: 4.1E-4
score: 21.1
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 1..40
score: 15.087
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 42..83
score: 10.241
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 84..114
score: 9.573
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..117
e-value: 1.5E-37
score: 131.3
NoneNo IPR availablePANTHERPTHR22848:SF2WD40 REPEAT-CONTAINING PROTEIN SMU1coord: 1..114
NoneNo IPR availablePANTHERPTHR22848WD40 REPEAT PROTEINcoord: 1..114
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..119
score: 26.393
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 2..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6479contigH-elongata_contig6479:8631..10264 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6479.14069.1mRNA_H-elongata_contig6479.14069.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig6479 8631..10264 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig6479.14069.1 ID=prot_H-elongata_contig6479.14069.1|Name=mRNA_H-elongata_contig6479.14069.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=120bp
MHDEAVLSGTFSRDGEHLATGSTDGKIKVWKISTGQCLRRFEIAHTQGVT
SLAFARDGSQLLSASMDQTARIHGLKSGKMLKEFRGHTSYVNTAVYMLDG
GKVVTGSADGTVKVNKYFF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf