mRNA_H-elongata_contig6476.14068.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig6476.14068.1 vs. uniprot
Match: D8LBK4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK4_ECTSI) HSP 1 Score: 587 bits (1513), Expect = 3.280e-200 Identity = 344/599 (57.43%), Postives = 417/599 (69.62%), Query Frame = 3
Query: 213 LHLNLDLWVDKFSSLNFFNPGVRLFYIDRNWELRSRLIAVRQFNPTSEMLESGHLFALLEEYLTTVFEEFNLDVNMMFSTTSDAGSDVR-RLCDILLLGPWEWCVCHMLNCALVKALGTHVDPEKSANPAARKVVVVVKKAVDHIR--KSPRAKAFFKEEQVRHYSECSYHKLVNAAPQQWCSVCSVLEAVIVNRTAIDGVYGKEGKDNPLTAYVDEIEELYSLIKPVADLIVTCQQTHIPTGQAAVLGLVALKLSTFNVDSALDILTPARKLAQGGAAGAGGGEQKASSAPKAHVDLTQVAHDARKHLSSAVNKRWFNKRYDLPAIENT-DFVFDTQMVLDLTTVELQYVDKLASTVEYAATVKKAVTSKVIGLAVELAKTEAQRTKDRGGGQGSPAAKWARSVAA-GSMHSMFRQPGNKKKAATTSKYVSLGIFKM--GGGPAAP-PTIEESVRAELFTLRGLAVGTLTAELSCEGVVMWWKKWKSSYPLLSRAA---CGVRSSSVVGGARA*FQRCWTHDDATKKLHRCQVRGHDCFSARQPVPHSRGHAELPADGV-----NGAQSKIPGRLSNPLPELQGLAGAFGPVDLTEEE 1961
LHL+LDLWVDK S+L F GVRLFYIDR W L+SRL+AVRQFNPT EM E+ L A+LE+YLT V EEF LDV+M+FS TSDAGSDV+ RLC L+ W+ CVCHMLNC+LV+A+GT VD K NPAARKVV+ VKK V+HIR KSP AKA F+EEQVRHYS+C + KLVN APQ+W V VLEA IVNR IDGVY +EG NPL + +EI+ELYSLIKPVA+LIVTCQQTH+PTGQAAVLGL LKLSTFNVD+ LD+LTP R AQG G GGGE+KA+S P+ H LTQV DAR+HL+SA+++R+F++ Y E T DFVFD QM L TT +LQYVDKL ST +AA VKK++T K+I LAVELA+ E +R K G Q AK AR AA GS+ + + NKK A T+K+ SLG+FK GGG A+ PT E RAEL TLRG+ GTLT +LSCEGV+ WWKKW YPLL+RAA G +S+ V +R +T DA + + G + + V G+ +L + + Q+KIPGRLSNP+PEL GL G G VDLT +E
Sbjct: 74 LHLDLDLWVDKSSTLMFM--GVRLFYIDREWRLKSRLLAVRQFNPTLEMFENERLSAVLEKYLTDVLEEFGLDVSMLFSATSDAGSDVKHRLCHTLIPRLWKSCVCHMLNCSLVEAIGTRVDSRKPGNPAARKVVLAVKKVVEHIRRSKSPGAKAIFQEEQVRHYSQCLHRKLVNVAPQRWSGVSGVLEATIVNRVGIDGVYAREGSVNPLAPHENEIDELYSLIKPVAELIVTCQQTHVPTGQAAVLGLATLKLSTFNVDARLDVLTPVR--AQGWPEGTGGGERKATSVPRLHNHLTQVGRDAREHLASALDRRYFDRCYKSADSEKTTDFVFDMQMGLHPTTADLQYVDKLTSTEVHAAFVKKSITDKIIALAVELAEKEMER-KQAGPEQDESVAKRARPAAAPGSLQTAVAKARNKKDDAATAKFASLGLFKKRRGGGEASQQPTFEPMARAELETLRGVEAGTLTDDLSCEGVLEWWKKWGRLYPLLARAARVVFGAPASAAV------LERDFT--DAWCMMASSRSAGDAKYV--EMVLFLHGNLDLIPEQIPELRDEDVQAKIPGRLSNPIPELHGLDGTLGLVDLTNDE 657
BLAST of mRNA_H-elongata_contig6476.14068.1 vs. uniprot
Match: A0A6H5JZ82_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ82_9PHAE) HSP 1 Score: 532 bits (1371), Expect = 4.200e-178 Identity = 301/596 (50.50%), Postives = 381/596 (63.93%), Query Frame = 3
Query: 210 LLHLNLDLWVDKFSSLNFFNPGVRLFYIDRNWELRSRLIAVRQFNPTSEMLESGHLFALLEEYLTTVFEEFNLDVNMMFSTTSDAGSDVRRLCDILLLGPWEWCVCHMLNCALVKALGTHVDPEKSANPAARKVVVVVKKAVDHIRKSPRAKAFFKEEQVRHYSECSYHKLVNAAPQQWCSVCSVLEAVIVNRTAIDGVYGKEGKDNPLTAYVDEIEELYSLIKPVADLIVTCQQTHIPTGQAAVLGLVALKLSTFNVDSALDILTPARKLAQGGAAGAGGGEQKASSAPKAHVDLTQVAHDARKHLSSAVNKRWFNKRYDLPAIENTDFVFDTQMVLDLTTVELQYVDKLASTVEYAATVKKAVTSKVIGLAVELAKTEAQRTKDRGGGQGSPAAKWARSVAA-GSMHSMFRQPGNKKKAATTSKYVSLGIFKMGGGPA--APPTIEESVRAELFTLRGLAVGTLTAELSCEGVVMWWKKWKSSYPLLSRAACGV----RSSSVVGGARA*FQRCWTHDDATKKLHRCQVRGHDCFSARQPVPHSRGHAELPADGVN-----GAQSKIPGRLSNPLPELQGLAGAFGPVDLTEEE 1961
LLH NLDLWVDKFSSL + G+RLFY DR W LRSRLIAVRQFNPT E+LE L ALL++YL +V EE+ LDV+++FS TSDAGSDV+RLCD+LL G WEWCVCHM+NCALV+A GTHVDP KS NP ARKV+ VKK V+HIRKSPRAKA F+EEQV+ Y++C + KLVNAAPQ+W V +VLEAVIVNR AIDGVY EGKD+PLT+ +EI+ELYS+IKP A +IV CQQT +PTGQ AVL L ALKL T NVDS L+ILTPARKLAQ +G GGGE+ A+S P+ H T VA R+H+ +V+ WF+KRY ++TD+V ST + T + + L + T PAAK AR AA GS+H +F+ P NK++ ATT+ Y SLG+F GG PP+ E++ RAEL LR + G+L LSCE V+ WWK W +YPLL+R A V S++V+ + R T +T ++ + G+ +L + + A++KIPGRL+NP+ L+ L G F PVDLT+EE
Sbjct: 163 LLHHNLDLWVDKFSSLKYI--GIRLFYADRTWVLRSRLIAVRQFNPTKELLEDNRLSALLQKYLESVLEEYGLDVSLLFSATSDAGSDVKRLCDVLLPGLWEWCVCHMINCALVEAFGTHVDPAKSGNPGARKVITTVKKVVEHIRKSPRAKAIFEEEQVQQYAQCYHRKLVNAAPQRWSGVTNVLEAVIVNRAAIDGVYTAEGKDSPLTSLTEEIDELYSIIKPAAQVIVKCQQTSVPTGQVAVLALAALKLITLNVDSPLEILTPARKLAQAETSGIGGGERPATSTPREHSLSTGVAKGTRQHICESVDWWWFDKRYKSAESQDTDYV---------------------STCRWPCTRPRLTCA-------ALHTGDVSTTPAGSAAADEPAAKRARQAAAPGSVHPLFKAPVNKREEATTNMYASLGLFGPGGDEQNEEPPSFEQTARAELTNLRAVQGGSLAPGLSCEDVLKWWKMWAHAYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEM-----------IMFLHGNLDLIPEDITKLTEAAARTKIPGRLANPVERLEQLDGVFAPVDLTDEE 717
BLAST of mRNA_H-elongata_contig6476.14068.1 vs. uniprot
Match: D8LFP4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFP4_ECTSI) HSP 1 Score: 506 bits (1303), Expect = 2.840e-167 Identity = 301/613 (49.10%), Postives = 395/613 (64.44%), Query Frame = 3
Query: 153 AQYHRDVLRDHCSVQGEDGLLHLNLDLWVDKFSSLNFFNPGVRLFYIDRNWELRSRLIAVRQFNPTSEMLESGHLFALLEEYLTTVFEEFNLDVNMMFSTTSDAGSDVRRLCDILLLGPWEWCVCHMLNCALVKALGTHVDPEKSANPAARKVVVVVKKAVDHIRKSPRAKAFFKEEQVRHYSECSYHKLVNAAPQQWCSVCSVLEAVIVNRTAIDGVYGKEGKDNPLTAYVDEIEELYSLIKPVADLIVTCQQTHIPTGQAAVLGLVALKLSTFNVDSALDILTPARKLAQGGAAGAGGGEQKASSAPKAHVDLTQVAHDARKHLSSAVNKRWFNKRYDLPAIENTDFVFDTQMVLDLTTVELQYVDKLASTVEYAATVKKAVTSKVIGLAVELAKTEAQRTKDRGGGQGSPAAKWARSVAA-GSMHSMFRQPGNKKKAATTSKYVSLGIFKMGG-GPAAPPTIEESVRAELFTLRGLAVGTLTAELSCEGVVMWWKKWKSSYPLLSRAACGVRSSSV--------VGGARA*FQRCWTHDDATKKLHRCQVRGHDCFSARQPVPHSRGHAELPADGVNGAQSKIPGRLSNPLPELQGLAGAFGPVDLTEEE 1961
AQ+ ++ + V LHL+L+LWVDK SSL + GVR FY++ W+L+S L+AVRQFNPT E L++ L LLE+Y+ V EEF +D +++FS TSDAG DV+RLC +LL G EWCVCHML+ +L +A+GT V P++ AAR VV+ VKKAV+ +RKSP +K F EEQV +S+CS K+VNAAPQ+W V LEA + NR AI+GVY +EG+D+PL+ +V EI+ELYSLI+PVA++I TCQQTH PTGQAAVLGL ALKLST N D+ LDILTPA K QG GAGG EQ+ ++ +AH DLT+V +AR+HL+SA++ R F+KRY ++T VFD QM L T +LQYV +LA T +AA VKK +T K+I LA +LA +A+R K QG PAAK A +A G+ + MF K+A TT+ LG+ G +A P E RAEL TLR + L + SCEGV+ WWK+ + SYPLL+R A V ++ +G A + DA K + + + +P ELPADGVNG Q+KIPGRLSNP+ EL L G FGPVDLT ++
Sbjct: 169 AQFKEEMATEVAGVP----CLHLSLELWVDKSSSLKYM--GVRFFYVNSVWQLKSYLLAVRQFNPTPETLKNERLSELLEKYVFAVLEEFGIDASLLFSATSDAGGDVKRLCSVLLPGLREWCVCHMLSDSLAEAVGTCVGPQQPGGRAARNVVMAVKKAVERVRKSPASKDIFTEEQVIQFSQCSNRKVVNAAPQRWSGVTGALEATVTNRAAINGVYAEEGEDSPLSPHVHEIDELYSLIQPVAEVIATCQQTHFPTGQAAVLGLAALKLSTLNADAPLDILTPASKPTQGATEGAGG-EQRTTA--RAHKDLTRVGREAREHLASALHWRDFDKRYKSTVAKSTGLVFDMQMGLHPCTADLQYVSRLAPTEGHAAVVKKNITDKIIALAAKLADKKAER-KGIEAEQGEPAAKRAPQASAPGNTYPMFASARYHKEATTTAIMAGLGLIATRDEGTSASPI--ERARAELETLRSASDDALFGDTSCEGVLNWWKRKEHSYPLLARVARVVFAAPASVMVQERDLGSAGRMMTSSRSTGDA-KYVEMVLFLHGNVDLLPEIIP------ELPADGVNGVQTKIPGRLSNPMLELHALDGEFGPVDLTNDD 762
BLAST of mRNA_H-elongata_contig6476.14068.1 vs. uniprot
Match: A0A6H5JNY1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY1_9PHAE) HSP 1 Score: 369 bits (947), Expect = 1.370e-117 Identity = 211/438 (48.17%), Postives = 267/438 (60.96%), Query Frame = 3
Query: 273 GVRLFYIDRNWELRSRLIAVRQFNPTSEMLESGHLFALLEEYLTTVFEEFNLDVNMMFSTTSDAGSDVRRLCDILLLGPWEWCVCHMLNCALVKALGTHVDPEKSANPAARKVVVVVKKAVDHIRKSPRAKAFFKEEQVRHYSECSYHKLVNAAPQQWCSVCSVLEAVIVNRTAIDGVYGKEGKDNPLTAYVDEIEELYSLIKPVADLIVTCQQTHIPTGQAAVLGLVALKLSTFNVDSALDILTPARKLAQGGAAGAGGGEQKASSAPKAHVDLTQVAHDARKHLSSAVNKRWFNKRYDLPAIENTDFVFDTQMVLDLTTVELQYVDKLASTVEYAATVKKAVTSKVIGLAVELAKTEAQRTKDRG------GGQGSPAAKWARSVAAGSMHSMFRQPGNKKKAATTSKYVSLGIFKM----GGGPAAPPTIEESVR 1556
G+RL+Y+DR W LRSRLIAVRQFNPT E+LE L LL++YL V E+ LDV+++FS TSDAGSDV+RLCD+LL G WEWCVCHM+NCA+VKA G HVDP KS NP ARKV+ VK V+HIRKSPRAKA F+EEQVR Y++C + KLVNAAPQ+W V +VLEAVIVNR AIDGVY EGK +PLT+ DEI+EL+ +IKP A +IV+ GE+ A+S P+ H LT VA R+H+ +V+ RWF+KRY ++TD+VFD QM L TT +L+YVDKLAST +A VK +T KVI LAV+LA+ A T D PAAK AR AA PG+K++ + + + K+ GG AA E+ ++
Sbjct: 3 GIRLYYVDRTWVLRSRLIAVRQFNPTKELLEDNRLSTLLQKYLERVLAEYGLDVSLLFSATSDAGSDVKRLCDVLLPGLWEWCVCHMMNCAVVKAFGMHVDPAKSRNPGARKVITTVKTIVEHIRKSPRAKAIFEEEQVRQYAQCYHRKLVNAAPQRWSGVTNVLEAVIVNRPAIDGVYAAEGKHSPLTSLTDEIDELHYIIKPAAQVIVS-------------------------------------------------GERPATSTPREHSLLTGVARGTRQHMCESVDWRWFDKRYKSAKSQDTDYVFDMQMALHPTTADLRYVDKLASTSAFAGAVKSTITDKVISLAVKLAEAAALHTGDGSTTPAWSAAADKPAAKRARQAAA---------PGSKEEPPSFEQTARAELTKLRAVQGGSLAAGLRCEDVLK 382
BLAST of mRNA_H-elongata_contig6476.14068.1 vs. uniprot
Match: A0A6H5KEK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEK6_9PHAE) HSP 1 Score: 364 bits (935), Expect = 2.060e-116 Identity = 237/475 (49.89%), Postives = 289/475 (60.84%), Query Frame = 3
Query: 555 ALGTHVDPEKSANPAARKVVVVVKKAVDHIRKS--PRAKAFFKEEQVRHYSECSYHKLVNAAPQQWCSVCSVLEAVIVNRTAIDGVYGKEGKDNPLTAYVDEIEELYSLIKPVADLIVTCQQTHIPTGQAAVLGLVALKLSTFNVDSALDILTPARKLAQGGAAGAGGGEQKASSAPKAHVDLTQVAHDARKHLSSAVNKRWFNKRYDLPAIENTDFVFDTQMVLDLTTVELQYVDKLASTVEYAATVKKAVTSKVIGLAVELAKTEAQRTKDRGGGQGSPAAKWARSVAAG-SMHSMFRQPGNKKKAATTSKYVSLGIFK---MGGGPAAPPTIEESVRAELFTLRGLAVGTLTAELSCEGVVMWWKKWKSSYPLLSRAACGVRSSSVVGGARA*FQRCWTHDDATKKLHRCQVRGHDCFSARQPVPHSRGHAELPADGVNGAQSKIPGRLSNPLPELQGLAGAFGPVDLTEEE 1961
A+GT VD K N AARK+V+ VKK V+HIRKS P A+A F+EEQVRHYS+C + KLVN APQ+W V VLEA IVNR IDGVY +EG NPL + +I+ELYS+IKPVA+LIVT QQTH+PTGQAA LGL ALKLSTFNVD+ LD+LTPAR AQG GAGG E KA+S P+ + K SA + TDFVFD QM L TT +LQYVDKLAS+ +AA V K +T K+I LAVELA E +R K G Q AK AR AA S H + NK + A T+K+ SL +FK +G + PT E AE TLRG+ G+LT +L CEGV+ WW+KW+ SYPLL+RAA + G A+ + H KL D F + P EL + ++ +KIPGRLSNP+PEL GL G GPVDLT +E
Sbjct: 13 AIGTRVDSRKPGNRAARKMVLAVKKVVEHIRKSKSPGAQAIFQEEQVRHYSQCLHRKLVNVAPQRWSGVGGVLEATIVNRVDIDGVYAREGSVNPLAPHEHDIDELYSVIKPVAELIVTYQQTHVPTGQAAALGLAALKLSTFNVDARLDVLTPAR--AQGRPEGAGGVEPKATSVPRCY-----------KPADSA---------------KTTDFVFDMQMGLHPTTADLQYVDKLASSKVHAAFVTKRITDKIITLAVELATKEMER-KQAGPEQHESVAKQARPAAAPKSSHPAVARARNKNEDAATAKFTSLRLFKKRRVGANASQQPTFEPMACAEFETLRGVEAGSLTDDLGCEGVLKWWEKWEGSYPLLARAARVDFGAPAAGDAKYVEMVLFLHG----KL--------DLFPEQIP--------ELRDEDIH---AKIPGRLSNPVPELHGLDGTLGPVDLTHDE 435
BLAST of mRNA_H-elongata_contig6476.14068.1 vs. uniprot
Match: A0A6H5KWS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWS6_9PHAE) HSP 1 Score: 301 bits (771), Expect = 6.120e-92 Identity = 144/219 (65.75%), Postives = 179/219 (81.74%), Query Frame = 3
Query: 210 LLHLNLDLWVDKFSSLNFFNPGVRLFYIDRNWELRSRLIAVRQFNPTSEMLESGHLFALLEEYLTTVFEEFNLDVNMMFSTTSDAGSDVRRLCDILLLGPWEWCVCHMLNCALVKALGTHVDPEKSANPAARKVVVVVKKAVDHIRKSPRAKAFFKEEQVRHYSECSYHKLVNAAPQQWCSVCSVLEAVIVNRTAIDGVYGKEGKDNPLTAYVDEIEEL 866
LLHL+LDLWVDKFSSL + G+ LFY+DR W LRSRLIAVRQFNPT E+LE L AL++++L +V EE+ LDV+++FS TSD+GSDV+RLCD+LL G WEWCVCHM+NCALV+A GTHVD KS NP ARKV+ + KK V+HI KSPRAKA F++EQVR Y++C + KLVNAAPQ+W V +VLEAVIVNR A++ VY EGKD+PLT+ +EI+EL
Sbjct: 237 LLHLSLDLWVDKFSSLKYV--GIPLFYVDRTWVLRSRLIAVRQFNPTKELLEDNRLSALVQKHLESVLEEYGLDVSLVFSATSDSGSDVKRLCDVLLPGLWEWCVCHMINCALVEAFGTHVDSAKSRNPGARKVITMGKKVVEHIPKSPRAKAIFEQEQVRQYAQCYHRKLVNAAPQRWSGVTNVLEAVIVNRAAVNAVYTTEGKDSPLTSLTNEIDEL 453
BLAST of mRNA_H-elongata_contig6476.14068.1 vs. uniprot
Match: A0A6H5JM59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM59_9PHAE) HSP 1 Score: 280 bits (716), Expect = 7.130e-86 Identity = 160/283 (56.54%), Postives = 184/283 (65.02%), Query Frame = 3
Query: 210 LLHLNLDLWVDKFSSLNFFNPGVRLFYIDRNWELRSRLIAVRQFNPTSEMLESGHLFALLEEYLTTVFEEFNLDVNMMFSTTSDAGSDVRRLCDILLLGPWEWCVCHMLNCALVKALGTHVDPEKSANPAARKVVVVVKKAVDHIRKSPRAKAFFKEEQVRHYSECSYHKLVNAAPQQWCSVCSVLEAVIVNRTAIDGVYGKEGKDNPLTAYVDEIEELYSLIKPVADLIVTCQQTHIPTGQAAVLGLVALKLSTFNVDSALDILTPARKLAQGGAAGAGGGE 1058
LLHLN DLWVDKFSSL G+RLFYIDR W LRSRLIAVRQFNPT E+LE L ALL++YL +V EE+ LDV+++FS TSDAGSD A GTHVDP KS +P RKV+ VK ++HIRKSPRAK F A C V +VLEAVIVNR AIDGVY EGKD+PLT+ DEI+EL+S+IKP A +IV CQQT +PT Q AVL L ALKL+T NVDS L+ILTPARKLAQ G +G GG E
Sbjct: 65 LLHLNRDLWVDKFSSLKCI--GIRLFYIDRTWVLRSRLIAVRQFNPTKELLEDNRLLALLQKYLESVLEEYGLDVSLLFSATSDAGSD---------------------------AFGTHVDPAKSRSPVVRKVIATVKMVMEHIRKSPRAKVSF-------------------AVVIGCGVTNVLEAVIVNRAAIDGVYTTEGKDSPLTSLTDEIDELFSIIKPAAQVIVKCQQTSVPTVQLAVLALAALKLTTLNVDSPLEILTPARKLAQAGTSGIGGRE 299
BLAST of mRNA_H-elongata_contig6476.14068.1 vs. uniprot
Match: A0A6H5KEC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEC8_9PHAE) HSP 1 Score: 271 bits (694), Expect = 1.430e-82 Identity = 136/221 (61.54%), Postives = 167/221 (75.57%), Query Frame = 3
Query: 210 LLHLNLDLWVDKFSSLNFFNPGVRLFYIDRNWELRSRLIAVRQFNPTSEMLESGHLFALLEEYLTTVFEEFNLDVNMMFSTTSDAGSDVRRLCDILLLGPWEWCVCHMLNCALVKALGTHVDPEKSANPAARKVVVVVKKA--VDHIRKSPRAKAFFKEEQVRHYSECSYHKLVNAAPQQWCSVCSVLEAVIVNRTAIDGVYGKEGKDNPLTAYVDEIEEL 866
LLHLNLDLWVDKFSSL + G+RLFY+DR W LRSRLIAVRQFNPT E+LE L ALL++YL +V EE+ LDV+++FS TSDAGSDV+RLCD+LL G WEWCVCHM+NCALV+A GTHV+P KS NP + +K V A F++EQVR Y++C + KLVNAAPQ+W V +VLEAVIVNR A++ VY EGKD+PLT+ +EI+EL
Sbjct: 84 LLHLNLDLWVDKFSSLKYI--GIRLFYVDRTWVLRSRLIAVRQFNPTKELLEDNRLSALLQKYLESVLEEYGLDVSLLFSATSDAGSDVKRLCDVLLPGLWEWCVCHMINCALVEAFGTHVNPAKSINPRCTQSDHDGEKGCGVHPQISQSEVGAIFEQEQVRQYAQCYHRKLVNAAPQRWSGVTNVLEAVIVNRAAVNAVYTTEGKDSPLTSLTNEIDEL 302
BLAST of mRNA_H-elongata_contig6476.14068.1 vs. uniprot
Match: A0A2V3ILY8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILY8_9FLOR) HSP 1 Score: 137 bits (344), Expect = 9.120e-33 Identity = 69/174 (39.66%), Postives = 106/174 (60.92%), Query Frame = 3
Query: 213 LHLNLDLWVDKFSSLNFFNPGVRLFYIDRNWELRSRLIAVRQFNPTSEMLESGHLFALLEEYLTTVFEEFNLDVNMMFSTTSDAGSDVRRLCDILLLGPWEWCVCHMLNCALVKALGTHVDPEKSANPAARKVVVVVKKAVDHIRKSPRAKAFFKEEQ-------VRHYSECSY 713
LH+N++LW + S FF G++LFY+ R WE+++ L+AVR F P+ +L L +L+ + + EFN+ + + S+TSD GSDV+RLC +L+ WEWC+ HMLNC LV A GT ++ N AR+++ +KK + H+ KS K FKE Q ++H S+ S+
Sbjct: 87 LHINVNLWTSRLSKDRFF--GIQLFYVSREWEVKAVLLAVRHFCPSGNLLPGRSLSDILQLWTNKIILEFNVSYDKILSSTSDTGSDVKRLCSVLIPESWEWCLPHMLNCVLVGAFGTGLNCVNIRNNGARRLLKDLKKVIRHVNKSSVMKQKFKETQEKNNRKRLKHLSDVSH 258
BLAST of mRNA_H-elongata_contig6476.14068.1 vs. uniprot
Match: A0A6H5KHW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHW5_9PHAE) HSP 1 Score: 121 bits (304), Expect = 3.450e-28 Identity = 66/97 (68.04%), Postives = 76/97 (78.35%), Query Frame = 3
Query: 213 LHLNLDLWVDKFSSLNFFNPGVRLFYIDRNWELRSRLIAVRQFNPTSEMLESGHLFALLEEYLTTVFEEFNLDVNMMFSTTSDAGSDVR-RLCDILL 500
LHL+L+LWVDK S+L F GVRLFYIDR W LRSRL+AVRQFNPT EM E+ L LLE++LT V E F LDV M+FS TSDAGSDV+ RLC IL+
Sbjct: 87 LHLDLELWVDKSSTLMFM--GVRLFYIDREWRLRSRLLAVRQFNPTPEMFENERLSKLLEKHLTDVLE-FGLDVYMLFSATSDAGSDVKHRLCYILI 180 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6476.14068.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig6476.14068.1 >prot_H-elongata_contig6476.14068.1 ID=prot_H-elongata_contig6476.14068.1|Name=mRNA_H-elongata_contig6476.14068.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=547bp MGKLKAERCEGVPRNWPPQPSGEAQYHRDVLRDHCSVQGEDGLLHLNLDLback to top mRNA from alignment at H-elongata_contig6476:6106..9010+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig6476.14068.1 ID=mRNA_H-elongata_contig6476.14068.1|Name=mRNA_H-elongata_contig6476.14068.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2905bp|location=Sequence derived from alignment at H-elongata_contig6476:6106..9010+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig6476:6106..9010+ >mRNA_H-elongata_contig6476.14068.1 ID=mRNA_H-elongata_contig6476.14068.1|Name=mRNA_H-elongata_contig6476.14068.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3282bp|location=Sequence derived from alignment at H-elongata_contig6476:6106..9010+ (Himanthalia elongata Himel1 dioecious)back to top |