prot_H-elongata_contig64751.14066.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig64751.14066.1
Unique Nameprot_H-elongata_contig64751.14066.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length109
Homology
BLAST of mRNA_H-elongata_contig64751.14066.1 vs. uniprot
Match: A0A6H5KE11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE11_9PHAE)

HSP 1 Score: 182 bits (462), Expect = 3.270e-51
Identity = 95/109 (87.16%), Postives = 99/109 (90.83%), Query Frame = 0
Query:    1 MVRRGDHEGAARMLLRVARNISRFPMHVVPILTSAVIECQRAGLRNSAFECASTLMRQASENRGQIDKKYRRNIETIVRRPNRDEEPEPISKCPISGAEVPITQLECSS 109
            MVRRGDHEGAARMLLRVAR+ISRFP H+VP+LTS VIECQR+GLRNSAFE ASTLMRQ  E RGQIDKKYRRNIE IVRRPNRDEEPEP SKCPIS AEVPITQLEC S
Sbjct:  642 MVRRGDHEGAARMLLRVARSISRFPTHIVPVLTSTVIECQRSGLRNSAFEYASTLMRQ--EYRGQIDKKYRRNIEAIVRRPNRDEEPEPTSKCPISAAEVPITQLECPS 748          
BLAST of mRNA_H-elongata_contig64751.14066.1 vs. uniprot
Match: D7FIK0_ECTSI (WD repeat membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIK0_ECTSI)

HSP 1 Score: 182 bits (462), Expect = 3.980e-51
Identity = 95/109 (87.16%), Postives = 99/109 (90.83%), Query Frame = 0
Query:    1 MVRRGDHEGAARMLLRVARNISRFPMHVVPILTSAVIECQRAGLRNSAFECASTLMRQASENRGQIDKKYRRNIETIVRRPNRDEEPEPISKCPISGAEVPITQLECSS 109
            MVRRGDHEGAARMLLRVAR+ISRFP H+VP+LTS VIECQR+GLRNSAFE ASTLMRQ  E RGQIDKKYRRNIE IVRRPNRDEEPEP SKCPIS AEVPITQLEC S
Sbjct: 1263 MVRRGDHEGAARMLLRVARSISRFPTHIVPVLTSTVIECQRSGLRNSAFEYASTLMRQ--EYRGQIDKKYRRNIEAIVRRPNRDEEPEPTSKCPISAAEVPITQLECPS 1369          
BLAST of mRNA_H-elongata_contig64751.14066.1 vs. uniprot
Match: A0A835ZAW6_9STRA (WD repeat membrane protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAW6_9STRA)

HSP 1 Score: 139 bits (349), Expect = 6.780e-36
Identity = 75/110 (68.18%), Postives = 88/110 (80.00%), Query Frame = 0
Query:    1 MVRRGDHEGAARMLLRVARNISRFPMHVVPILTSAVIECQRAGLRNSAFECASTLMRQASENRGQIDKKYRRNIETIVRRPNRDEE-PEPISKCPISGAEVPITQLECSS 109
            + RRG+HEGAARMLLRVAR+ SRFP H V +LTS VIECQRAGLR SAFE AS LMR   E+RGQIDKKYRR+IE IVRRP+R+ E PE  + CPI+GA +  T LEC++
Sbjct: 1314 LARRGEHEGAARMLLRVARSASRFPAHTVAVLTSCVIECQRAGLRESAFEYASVLMR--PEHRGQIDKKYRRSIEAIVRRPSREPEAPEVCTPCPITGAPLAATALECAA 1421          
BLAST of mRNA_H-elongata_contig64751.14066.1 vs. uniprot
Match: A0A7S2V6K7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6K7_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.590e-35
Identity = 71/108 (65.74%), Postives = 85/108 (78.70%), Query Frame = 0
Query:    1 MVRRGDHEGAARMLLRVARNISRFPMHVVPILTSAVIECQRAGLRNSAFECASTLMRQASENRGQIDKKYRRNIETIVRRPNRDEE-PEPISKCPISGAEVPITQLEC 107
            MV+RGDH  A+RMLLRVA++IS+FP H+VPILTS VI CQRAGL+ SAFE  S LMR   E R Q+D K++R IE IVRRPNR EE  E ++KCPISG  +P+TQLEC
Sbjct:   16 MVKRGDHMSASRMLLRVAKSISKFPSHMVPILTSTVITCQRAGLKPSAFEYGSMLMR--PEFRQQMDPKFKRKIEQIVRRPNRGEEMAEDMTKCPISGIPIPMTQLEC 121          
BLAST of mRNA_H-elongata_contig64751.14066.1 vs. uniprot
Match: F0YFC0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFC0_AURAN)

HSP 1 Score: 129 bits (324), Expect = 1.590e-32
Identity = 66/107 (61.68%), Postives = 84/107 (78.50%), Query Frame = 0
Query:    1 MVRRGDHEGAARMLLRVARNISRFPMHVVPILTSAVIECQRAGLRNSAFECASTLMRQASENRGQIDKKYRRNIETIVRRPNRDEEPEPISKCPISGAEVPITQLEC 107
            +++ GDH+ AARMLLRVA++IS+FP H  PILTS VIECQRAGL+ SA E A+ LMR   E RG+ID K++R IE ++RRPN +EEPE +S CPISG  +P T+LEC
Sbjct: 1209 LIKAGDHDAAARMLLRVAKSISKFPSHGAPILTSTVIECQRAGLKASAHEYATQLMR--PELRGKIDPKFKRKIEQMIRRPNLEEEPELLSPCPISGVMIPRTELEC 1313          
BLAST of mRNA_H-elongata_contig64751.14066.1 vs. uniprot
Match: A0A7S2AWF5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AWF5_9STRA)

HSP 1 Score: 125 bits (315), Expect = 7.580e-32
Identity = 64/106 (60.38%), Postives = 83/106 (78.30%), Query Frame = 0
Query:    2 VRRGDHEGAARMLLRVARNISRFPMHVVPILTSAVIECQRAGLRNSAFECASTLMRQASENRGQIDKKYRRNIETIVRRPNRDEEPEPISKCPISGAEVPITQLEC 107
            + R DH GAAR+LLRVA++IS+FP H+V ILTS VIE  RAGL+ SA E A+ LMRQ  E R Q+D K++R IE +VRRPNR+E PEP+S+CP+SG  +P++ LEC
Sbjct:  287 IARDDHAGAARLLLRVAKSISKFPAHMVIILTSTVIESARAGLKKSALEYATVLMRQ--EYRAQVDSKFKRKIEGLVRRPNREELPEPVSECPVSGILIPVSCLEC 390          
BLAST of mRNA_H-elongata_contig64751.14066.1 vs. uniprot
Match: UPI001EB09D72 (WD repeat-containing protein 19-like isoform X1 n=6 Tax=Haliotis TaxID=6452 RepID=UPI001EB09D72)

HSP 1 Score: 127 bits (318), Expect = 1.020e-31
Identity = 63/106 (59.43%), Postives = 82/106 (77.36%), Query Frame = 0
Query:    2 VRRGDHEGAARMLLRVARNISRFPMHVVPILTSAVIECQRAGLRNSAFECASTLMRQASENRGQIDKKYRRNIETIVRRPNRDEEPEPISKCPISGAEVPITQLEC 107
            ++RGDH   ARML+RVA NIS+FP H+VP+LTS VIECQR+GL+NSAF  A+ LMR   E R QID KY++ IE IVR+P++ EE EP+S CP+ G ++P T+L C
Sbjct: 1224 IKRGDHLKGARMLIRVANNISKFPSHIVPLLTSTVIECQRSGLKNSAFSYAAMLMR--PEYRNQIDLKYKKKIEMIVRKPDKTEEDEPLSPCPVCGFQLPETELMC 1327          
BLAST of mRNA_H-elongata_contig64751.14066.1 vs. uniprot
Match: A0A388JTS2_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JTS2_CHABU)

HSP 1 Score: 126 bits (317), Expect = 1.360e-31
Identity = 65/109 (59.63%), Postives = 82/109 (75.23%), Query Frame = 0
Query:    1 MVRRGDHEGAARMLLRVARNISRFPMHVVPILTSAVIECQRAGLRNSAFECASTLMRQASENRGQIDKKYRRNIETIVRRPNRDEEPEPISKCPISGAEVPITQLECSS 109
            +V+ GDHE +ARML+RVARNIS+FP H+VPILTS VIECQR+GL+N+AF+ AS LMR  SE R  I   Y+R IE IVR+P++ E  +P+S CP     +P TQLEC S
Sbjct:  678 LVKLGDHESSARMLIRVARNISKFPAHIVPILTSTVIECQRSGLKNTAFQYASMLMR--SEYRSSIAPAYKRKIENIVRKPDKSEAEDPLSPCPFCEMLIPETQLECPS 784          
BLAST of mRNA_H-elongata_contig64751.14066.1 vs. uniprot
Match: A0A423U4K0_PENVA (Putative WD repeat-containing protein 19-like n=5 Tax=Penaeus TaxID=133894 RepID=A0A423U4K0_PENVA)

HSP 1 Score: 126 bits (317), Expect = 1.400e-31
Identity = 67/106 (63.21%), Postives = 80/106 (75.47%), Query Frame = 0
Query:    2 VRRGDHEGAARMLLRVARNISRFPMHVVPILTSAVIECQRAGLRNSAFECASTLMRQASENRGQIDKKYRRNIETIVRRPNRDEEPEPISKCPISGAEVPITQLEC 107
            VRRGDH  AARML+RVA +IS+FP H+VPILTS VIECQR+GL+NS+F  A+ LMR   E RGQID+KY++ IE IVR+P R EE EP S CP   + V  T LEC
Sbjct: 1168 VRRGDHLKAARMLIRVANHISKFPAHMVPILTSTVIECQRSGLKNSSFNFAAMLMR--PETRGQIDEKYKKKIEAIVRKPQRSEEDEPSSPCPYCSSPVEETVLEC 1271          
BLAST of mRNA_H-elongata_contig64751.14066.1 vs. uniprot
Match: UPI001E675752 (WD repeat-containing protein 19-like n=1 Tax=Procambarus clarkii TaxID=6728 RepID=UPI001E675752)

HSP 1 Score: 126 bits (316), Expect = 1.900e-31
Identity = 65/106 (61.32%), Postives = 81/106 (76.42%), Query Frame = 0
Query:    2 VRRGDHEGAARMLLRVARNISRFPMHVVPILTSAVIECQRAGLRNSAFECASTLMRQASENRGQIDKKYRRNIETIVRRPNRDEEPEPISKCPISGAEVPITQLEC 107
            V+RGDH  AARML+RVA+NIS+FP H+VPILTS VIECQR+GL+NS+F  A+TLMR   E R QID+KY++ IE IVR+P + E+ EP S CP   + V  T LEC
Sbjct: 1168 VKRGDHLKAARMLIRVAQNISKFPAHMVPILTSTVIECQRSGLKNSSFNFAATLMR--PETRNQIDEKYKKKIEAIVRKPQKTEDEEPTSPCPFCASPVAETTLEC 1271          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig64751.14066.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KE11_9PHAE3.270e-5187.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIK0_ECTSI3.980e-5187.16WD repeat membrane protein n=1 Tax=Ectocarpus sili... [more]
A0A835ZAW6_9STRA6.780e-3668.18WD repeat membrane protein n=1 Tax=Tribonema minus... [more]
A0A7S2V6K7_9STRA1.590e-3565.74Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
F0YFC0_AURAN1.590e-3261.68Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2AWF5_9STRA7.580e-3260.38Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
UPI001EB09D721.020e-3159.43WD repeat-containing protein 19-like isoform X1 n=... [more]
A0A388JTS2_CHABU1.360e-3159.63Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A423U4K0_PENVA1.400e-3163.21Putative WD repeat-containing protein 19-like n=5 ... [more]
UPI001E6757521.900e-3161.32WD repeat-containing protein 19-like n=1 Tax=Proca... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040379WD repeat-containing protein 19/dyf-2PANTHERPTHR14920OSMOTIC AVOIDANCE ABNORMAL PROTEIN 1/WD REPEAT MEMBRANE PROTEINcoord: 1..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig64751contigH-elongata_contig64751:1172..1664 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig64751.14066.1mRNA_H-elongata_contig64751.14066.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig64751 1163..1664 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig64751.14066.1 ID=prot_H-elongata_contig64751.14066.1|Name=mRNA_H-elongata_contig64751.14066.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=109bp
MVRRGDHEGAARMLLRVARNISRFPMHVVPILTSAVIECQRAGLRNSAFE
CASTLMRQASENRGQIDKKYRRNIETIVRRPNRDEEPEPISKCPISGAEV
PITQLECSS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040379WDR19/dyf-2