mRNA_H-elongata_contig64743.14065.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig64743.14065.1
Unique NamemRNA_H-elongata_contig64743.14065.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig64743.14065.1 vs. uniprot
Match: D7FYK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYK2_ECTSI)

HSP 1 Score: 351 bits (901), Expect = 1.590e-121
Identity = 163/203 (80.30%), Postives = 184/203 (90.64%), Query Frame = 1 
Query:    1 MLKSALRAIVDKYRLTMVCLPNQSIIFKDIAPEQREGLEAILASYGVKPVEQIDPLLRLSMACPALPMCGLAMTESERRTPSYIDRFRAMLDRIGLGDEEIMIRMTGCPNGCARPYMAELAFVGDGPDSYQVWLGGSPANTRTAYPFAQRMKDAAMEDMLEPILRAYKATRQSAPGSSFPEAFGDWCHRLGADGVKSAASGVS 609
            MLKSALRA+VDKYRLTMVC PNQS+I +DI+PEQREG+EAIL SYGVKP+EQIDPL RLSMACPALPMCGLA+TE+ERR PSY++R RAMLD++GLGDEE+M+RMTGCPNGCARPYMAELAFVGDGPDSYQVWLGGSP NTRTAY +  RMKD AMED +EPIL AYKATRQ+APG S+PEAFGDWCHRL   GV+SA + V+
Sbjct:    1 MLKSALRALVDKYRLTMVCTPNQSVILRDISPEQREGVEAILNSYGVKPIEQIDPLTRLSMACPALPMCGLAITEAERRMPSYVERIRAMLDKVGLGDEEVMVRMTGCPNGCARPYMAELAFVGDGPDSYQVWLGGSPGNTRTAYIYTNRMKDPAMEDTVEPILTAYKATRQNAPGKSYPEAFGDWCHRLEKGGVESATAKVA 203
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BLAST of mRNA_H-elongata_contig64743.14065.1 vs. uniprot
Match: A0A448ZQU8_9STRA (Assimilatory sulfite reductase (ferredoxin) n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZQU8_9STRA)

HSP 1 Score: 269 bits (687), Expect = 1.370e-83
Identity = 126/195 (64.62%), Postives = 156/195 (80.00%), Query Frame = 1 
Query:    4 LKSALRAIVDKYRLTMVCLPNQSIIFKDIAPEQREGLEAILASYGVKPVEQIDPLLRLSMACPALPMCGLAMTESERRTPSYIDRFRAMLDRIGLGDEEIMIRMTGCPNGCARPYMAELAFVGDGPDSYQVWLGGSPANTRTAYPFAQRMKDAAMEDMLEPILRAYKATRQSAPGSSFPEAFGDWCHRLGADGVK 588
            LKS +RAIVDKY L M+  P QSIIFKDI PE + G EAILA +G+KP+E+IDPL RLSMACPALP+CGLA TE+ER  PSYI+R RA+L ++G+ DEEI++RMTGCPNGCARPYMAE+AFVGDGP SYQ+WLGGSP  TRTA+PF  ++K+  +E ++EPIL  +K  RQ        EAFGD+CHR+GAD ++
Sbjct:  438 LKSCMRAIVDKYNLPMIMSPTQSIIFKDIKPEDKAGFEAILAEHGIKPLEEIDPLARLSMACPALPLCGLAQTEAERIMPSYIERIRAVLGKLGIDDEEILMRMTGCPNGCARPYMAEMAFVGDGPKSYQIWLGGSPVLTRTAWPFKAKVKNDDLEVIVEPILAMFKEQRQEF------EAFGDFCHRVGADAIE 626
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BLAST of mRNA_H-elongata_contig64743.14065.1 vs. uniprot
Match: A0A835Z7S6_9STRA (Assimilatory sulfite reductase (ferredoxin) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7S6_9STRA)

HSP 1 Score: 268 bits (686), Expect = 2.020e-83
Identity = 124/201 (61.69%), Postives = 158/201 (78.61%), Query Frame = 1 
Query:    4 LKSALRAIVDKYRLTMVCLPNQSIIFKDIAPEQREGLEAILASYGVKPVEQIDPLLRLSMACPALPMCGLAMTESERRTPSYIDRFRAMLDRIGLGDEEIMIRMTGCPNGCARPYMAELAFVGDGPDSYQVWLGGSPANTRTAYPFAQRMKDAAMEDMLEPILRAYKATRQSAPGSSFPEAFGDWCHRLGADGVKSAASGV 606
            +K+ALRAI D++   M+C PNQS+I +D+A  QR  LEA+LA++G+ P+E IDPL RL++ACPALPMCGLA+TE+ERR P +I R RA+LD  GLGDEEIM+RMTGCPNGCARPYMAELAFVGDGPD+YQVWLGG+P   R  YP  + MK+  +E  L P+L AYKA RQ+  G+  PE+FG++C RLG  GV++A + V
Sbjct:  439 IKTALRAIADRFAFPMICTPNQSLILRDVAEAQRAPLEALLAAHGILPIEAIDPLTRLAIACPALPMCGLAITEAERRMPEFITRVRALLDAGGLGDEEIMMRMTGCPNGCARPYMAELAFVGDGPDTYQVWLGGTPQCDRVGYPLMKGMKEKDLEATLRPLLAAYKAGRQTRAGARGPESFGEYCSRLGKAGVEAAVAAV 639
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BLAST of mRNA_H-elongata_contig64743.14065.1 vs. uniprot
Match: A0A1E7F3M1_9STRA (Assimilatory sulfite reductase (ferredoxin) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F3M1_9STRA)

HSP 1 Score: 262 bits (670), Expect = 1.770e-81
Identity = 125/202 (61.88%), Postives = 155/202 (76.73%), Query Frame = 1 
Query:    4 LKSALRAIVDKYRLTMVCLPNQSIIFKDIAPEQREGLEAILASYGVKPVEQIDPLLRLSMACPALPMCGLAMTESERRTPSYIDRFRAMLDRIGLGDEEIMIRMTGCPNGCARPYMAELAFVGDGPDSYQVWLGGSPANTRTAYPFAQRMKDAAMEDMLEPILRAYKATRQSAPGSSFPEAFGDWCHRLGADGVKSAASGVS 609
            LKSA+RAIVDKY L M+  P QSIIFKDI PE + G E IL+ +G+K +E+IDPL RL+MACPALP+CGLA TE+ER  PSYI+R RA+++++G+ DEEI+IRMTGCPNGCARPYMAELAFVGDGP SYQVWLGGSP  TRTA+PF  RM    +E  +EPIL  ++  RQ        EAFGD+CHR+GA+ ++  +   S
Sbjct:  399 LKSAMRAIVDKYNLPMIMSPTQSIIFKDIKPEDKAGFETILSEHGIKKLEEIDPLARLAMACPALPLCGLAQTEAERIMPSYIERMRAVMNKVGVDDEEILIRMTGCPNGCARPYMAELAFVGDGPKSYQVWLGGSPVLTRTAWPFKARMNTNDLEITMEPILTMFRDQRQEF------EAFGDFCHRVGAEEIEKYSESFS 594
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BLAST of mRNA_H-elongata_contig64743.14065.1 vs. uniprot
Match: A0A7S1GPP5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GPP5_CYCTE)

HSP 1 Score: 251 bits (640), Expect = 3.450e-81
Identity = 116/196 (59.18%), Postives = 153/196 (78.06%), Query Frame = 1 
Query:    4 LKSALRAIVDKYRLTMVCLPNQSIIFKDIAPEQREGLEAILASYGVKPVEQIDPLLRLSMACPALPMCGLAMTESERRTPSYIDRFRAMLDRIGLGDEEIMIRMTGCPNGCARPYMAELAFVGDGPDSYQVWLGGSPANTRTAYPFAQRMKDAAMEDMLEPILRAYKATRQSAPGSSFPEAFGDWCHRLGADGVKS 591
            LK+ALR IVD Y L MV  P QSII +DI P+ ++ +E ILA +G+KP+E++DPL RL+MACPALP+CGLA TE+ER+ P Y+ + R++L+++ L DEEI++RMTGCPNGCARPYMAELAFVGDGP SYQVWLGGSP  TRTA+PF  +MK+  +E  +EPIL  +   RQ+       EAFGD+CHR+GA+ +++
Sbjct:   47 LKTALRVIVDTYNLPMVMSPTQSIIIRDIDPKDKDDIEKILADHGLKPIEEVDPLNRLAMACPALPLCGLAQTEAERKMPDYLAQMRSLLNKMNLSDEEILMRMTGCPNGCARPYMAELAFVGDGPKSYQVWLGGSPVLTRTAFPFKAKMKNTDLEATVEPILAMFIQQRQNF------EAFGDFCHRVGAEAIEA 236
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BLAST of mRNA_H-elongata_contig64743.14065.1 vs. uniprot
Match: A0A1Z5JYL9_FISSO (Assimilatory sulfite reductase (ferredoxin) n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JYL9_FISSO)

HSP 1 Score: 259 bits (661), Expect = 6.950e-80
Identity = 123/196 (62.76%), Postives = 151/196 (77.04%), Query Frame = 1 
Query:    4 LKSALRAIVDKYRLTMVCLPNQSIIFKDIAPEQREGLEAILASYGVKPVEQIDPLLRLSMACPALPMCGLAMTESERRTPSYIDRFRAMLDRIGLGDEEIMIRMTGCPNGCARPYMAELAFVGDGPDSYQVWLGGSPANTRTAYPFAQRMKDAAMEDMLEPILRAYKATRQSAPGSSFPEAFGDWCHRLGADGVKS 591
            LKSALRAIVDKY L MV  P QSI+ KDI P  + G+EAI A +G+KP+EQ+DPL RL+MACPALP+CGLA TE+ER  PSY++R RA+L ++ L  EEI+IRMTGCPNGCARPYMAELAFVGDGP SYQVWLGGSP  TRTAYPF  +M    +E  +EPIL+ +K  R+        EAFGD+CHR+G+  +++
Sbjct:  429 LKSALRAIVDKYNLHMVMSPTQSIVLKDIDPADKAGIEAIFAQHGIKPLEQVDPLNRLAMACPALPLCGLAQTEAERLMPSYLERIRAVLTKLDLDQEEILIRMTGCPNGCARPYMAELAFVGDGPQSYQVWLGGSPVLTRTAYPFLAKMDVNELEKTIEPILKMWKTQREPF------EAFGDFCHRVGSSAIEA 618
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BLAST of mRNA_H-elongata_contig64743.14065.1 vs. uniprot
Match: A0A6T8GFQ6_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8GFQ6_9STRA)

HSP 1 Score: 250 bits (639), Expect = 6.990e-80
Identity = 116/195 (59.49%), Postives = 150/195 (76.92%), Query Frame = 1 
Query:    4 LKSALRAIVDKYRLTMVCLPNQSIIFKDIAPEQREGLEAILASYGVKPVEQIDPLLRLSMACPALPMCGLAMTESERRTPSYIDRFRAMLDRIGLGDEEIMIRMTGCPNGCARPYMAELAFVGDGPDSYQVWLGGSPANTRTAYPFAQRMKDAAMEDMLEPILRAYKATRQSAPGSSFPEAFGDWCHRLGADGVK 588
            LKSALRAI DKY L M+  P+QSI+F+D+ PE +EG   IL  +G++ +E IDPL RL++ACPALP+CGLA TE+ERR PSYI+R R++L+ + +G+EEIM+RMTGCPNGCARPYMAELAFVGDG +SYQ+WLGGSP  TRTA+P+  RMKD  +E  +EPIL  +   R+        EAFGD+CHR+G   ++
Sbjct:  133 LKSALRAIADKYHLAMIMSPSQSIMFRDVNPEDKEGFMQILVEHGIEAIEDIDPLNRLAIACPALPLCGLAQTEAERRMPSYIERIRSVLEMMNIGNEEIMMRMTGCPNGCARPYMAELAFVGDGLNSYQIWLGGSPVLTRTAFPYVARMKDKNLEATMEPILAHFITERKEF------EAFGDFCHRVGCSAIE 321
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BLAST of mRNA_H-elongata_contig64743.14065.1 vs. uniprot
Match: A0A7S4RLB8_9STRA (Assimilatory sulfite reductase (ferredoxin) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RLB8_9STRA)

HSP 1 Score: 259 bits (661), Expect = 9.460e-80
Identity = 117/199 (58.79%), Postives = 156/199 (78.39%), Query Frame = 1 
Query:    4 LKSALRAIVDKYRLTMVCLPNQSIIFKDIAPEQREGLEAILASYGVKPVEQIDPLLRLSMACPALPMCGLAMTESERRTPSYIDRFRAMLDRIGLGDEEIMIRMTGCPNGCARPYMAELAFVGDGPDSYQVWLGGSPANTRTAYPFAQRMKDAAMEDMLEPILRAYKATRQSAPGSSFPEAFGDWCHRLGADGVKSAAS 600
            LK+ALR +VD+Y L+M+  P QS+IF+D+ P+ +EG+E +L  +G+KPVE++DPL RLSMACPALP+CGLA TE+ER  PSYI+R R++L+++ +G+EEI++RMTGCPNGCARPYMAE+AFVGDGP SYQ+WLGGSP  TRTAYP+  +M +  +E  LEPI   Y   RQ        EAFGD+CHR+GAD ++  +S
Sbjct:  434 LKTALRVLVDRYNLSMILSPTQSLIFRDVDPKDKEGIETVLREHGIKPVEEVDPLSRLSMACPALPLCGLAQTEAERIMPSYIERVRSVLEKMNIGEEEILMRMTGCPNGCARPYMAEIAFVGDGPKSYQLWLGGSPVLTRTAYPYMAKMNNDDLEVTLEPIFAMYIQQRQQF------EAFGDFCHRVGADAIEQYSS 626
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BLAST of mRNA_H-elongata_contig64743.14065.1 vs. uniprot
Match: A0A7S1Y212_9STRA (Assimilatory sulfite reductase (ferredoxin) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y212_9STRA)

HSP 1 Score: 257 bits (656), Expect = 4.480e-79
Identity = 118/195 (60.51%), Postives = 153/195 (78.46%), Query Frame = 1 
Query:    4 LKSALRAIVDKYRLTMVCLPNQSIIFKDIAPEQREGLEAILASYGVKPVEQIDPLLRLSMACPALPMCGLAMTESERRTPSYIDRFRAMLDRIGLGDEEIMIRMTGCPNGCARPYMAELAFVGDGPDSYQVWLGGSPANTRTAYPFAQRMKDAAMEDMLEPILRAYKATRQSAPGSSFPEAFGDWCHRLGADGVK 588
            LKSALR +VDKY L+M+  P QS+IF+DI P+ + G+EA+LA +G+KP+E++DPL RL+MACPALP+CGLA TE+ER  P Y+ R R++L+++ + +EEI+IRMTGCPNGCARPYMAEL FVGDGP SYQVWLGGSP  TRTA+PF  +M    ME+ +EPIL  +   RQ        EAFGD+CHR+GADG++
Sbjct:  427 LKSALRVLVDKYNLSMILSPTQSLIFRDIDPKDKAGVEAVLAEHGIKPLEEVDPLNRLAMACPALPLCGLAQTEAERIVPDYLARIRSLLNKMNIPEEEILIRMTGCPNGCARPYMAELGFVGDGPKSYQVWLGGSPVLTRTAWPFRAKMPTDKMEETMEPILAMFIEQRQQF------EAFGDFCHRVGADGIE 615
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BLAST of mRNA_H-elongata_contig64743.14065.1 vs. uniprot
Match: A0A835ZIU7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIU7_9STRA)

HSP 1 Score: 253 bits (647), Expect = 5.700e-78
Identity = 118/199 (59.30%), Postives = 150/199 (75.38%), Query Frame = 1 
Query:    4 LKSALRAIVDKYRLTMVCLPNQSIIFKDIAPEQREGLEAILASYGVKPVEQIDPLLRLSMACPALPMCGLAMTESERRTPSYIDRFRAMLDRIGLGDEEIMIRMTGCPNGCARPYMAELAFVGDGPDSYQVWLGGSPANTRTAYPFAQRMKDAAMEDMLEPILRAYKATRQSAPGSSFPEAFGDWCHRLGADGVKSAAS 600
            +K+ALR IVD +  TM+C PNQS+I +D+  +QR  +EA L  +GV P+EQIDPL RLSMAC ALP CGLA+TE+ERR PS I R RA+LD   LG EEIM+R TGCPNGCARPYMAELAFVGDGPD+YQ+W+GG P+  R  +P  +R+K    ED+L P LRAY+  R + PG+  PE+FG++C RLG  G+++A S
Sbjct:  400 IKTALREIVDTFGFTMICTPNQSLILRDVDAQQRSAVEAALRRHGVLPIEQIDPLTRLSMACVALPTCGLAITEAERRMPSVIARIRALLDAESLGAEEIMVRATGCPNGCARPYMAELAFVGDGPDTYQLWVGGVPSCDRVGFPVVERVKFEGFEDVLRPFLRAYREQRITVPGARGPESFGEYCSRLGKAGLEAALS 598
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig64743.14065.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYK2_ECTSI1.590e-12180.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A448ZQU8_9STRA1.370e-8364.62Assimilatory sulfite reductase (ferredoxin) n=1 Ta... [more]
A0A835Z7S6_9STRA2.020e-8361.69Assimilatory sulfite reductase (ferredoxin) n=1 Ta... [more]
A0A1E7F3M1_9STRA1.770e-8161.88Assimilatory sulfite reductase (ferredoxin) n=1 Ta... [more]
A0A7S1GPP5_CYCTE3.450e-8159.18Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A1Z5JYL9_FISSO6.950e-8062.76Assimilatory sulfite reductase (ferredoxin) n=2 Ta... [more]
A0A6T8GFQ6_9STRA6.990e-8059.49Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S4RLB8_9STRA9.460e-8058.79Assimilatory sulfite reductase (ferredoxin) n=2 Ta... [more]
A0A7S1Y212_9STRA4.480e-7960.51Assimilatory sulfite reductase (ferredoxin) n=1 Ta... [more]
A0A835ZIU7_9STRA5.700e-7859.30Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig64743contigH-elongata_contig64743:505..2936 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score352.1
Seed ortholog evalue1.8e-94
Seed eggNOG ortholog2880.D7FYK2
Preferred nameSIR1
KEGG rclassRC00065
KEGG koko:K00381,ko:K00392,ko:K02981
KEGG ReactionR00858,R00859,R03600
KEGG Pathwayko00920,ko01100,ko01120,ko03010,map00920,map01100,map01120,map03010
KEGG ModuleM00176,M00177
GOsGO:0000096,GO:0000097,GO:0000103,GO:0000322,GO:0000323,GO:0000324,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0005488,GO:0005507,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0006082,GO:0006275,GO:0006323,GO:0006355,GO:0006520,GO:0006790,GO:0006807,GO:0006950,GO:0006970,GO:0006996,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009266,GO:0009295,GO:0009337,GO:0009403,GO:0009404,GO:0009409,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009628,GO:0009651,GO:0009889,GO:0009890,GO:0009892,GO:0009941,GO:0009987,GO:0010319,GO:0010468,GO:0010494,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016002,GO:0016020,GO:0016043,GO:0016053,GO:0016491,GO:0016667,GO:0016673,GO:0017144,GO:0019219,GO:0019222,GO:0019418,GO:0019419,GO:0019424,GO:0019748,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031967,GO:0031975,GO:0032991,GO:0035770,GO:0036385,GO:0036464,GO:0042644,GO:0042646,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0044550,GO:0045892,GO:0045934,GO:0046394,GO:0046872,GO:0046914,GO:0048046,GO:0048519,GO:0048523,GO:0050311,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0055114,GO:0060255,GO:0065007,GO:0070813,GO:0070814,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0097159,GO:1900160,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:1990904,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.sulfite reductase (ferredoxin) activity
EggNOG OGsCOG0155@1,KOG0560@2759
EC1.8.1.2,1.8.7.1
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko03011
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSulfite reductase
Ec32 orthologEc-02_004330.1
Exons5
Model size615
Cds size615
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig64743.14065.1prot_H-elongata_contig64743.14065.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig64743 505..2936 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931033.3212104-CDS-H-elongata_contig64743:504..6601622931033.3212104-CDS-H-elongata_contig64743:504..660Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64743 505..660 +
1691679670.1428273-CDS-H-elongata_contig64743:504..6601691679670.1428273-CDS-H-elongata_contig64743:504..660Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64743 505..660 +
1622931033.3342772-CDS-H-elongata_contig64743:925..10471622931033.3342772-CDS-H-elongata_contig64743:925..1047Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64743 926..1047 +
1691679670.1538231-CDS-H-elongata_contig64743:925..10471691679670.1538231-CDS-H-elongata_contig64743:925..1047Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64743 926..1047 +
1622931033.3497455-CDS-H-elongata_contig64743:1812..19271622931033.3497455-CDS-H-elongata_contig64743:1812..1927Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64743 1813..1927 +
1691679670.163672-CDS-H-elongata_contig64743:1812..19271691679670.163672-CDS-H-elongata_contig64743:1812..1927Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64743 1813..1927 +
1622931033.3612375-CDS-H-elongata_contig64743:2381..24821622931033.3612375-CDS-H-elongata_contig64743:2381..2482Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64743 2382..2482 +
1691679670.180852-CDS-H-elongata_contig64743:2381..24821691679670.180852-CDS-H-elongata_contig64743:2381..2482Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64743 2382..2482 +
1622931033.378365-CDS-H-elongata_contig64743:2815..29361622931033.378365-CDS-H-elongata_contig64743:2815..2936Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64743 2816..2936 +
1691679670.1926112-CDS-H-elongata_contig64743:2815..29361691679670.1926112-CDS-H-elongata_contig64743:2815..2936Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64743 2816..2936 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig64743.14065.1

>prot_H-elongata_contig64743.14065.1 ID=prot_H-elongata_contig64743.14065.1|Name=mRNA_H-elongata_contig64743.14065.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=205bp
MLKSALRAIVDKYRLTMVCLPNQSIIFKDIAPEQREGLEAILASYGVKPV
EQIDPLLRLSMACPALPMCGLAMTESERRTPSYIDRFRAMLDRIGLGDEE
IMIRMTGCPNGCARPYMAELAFVGDGPDSYQVWLGGSPANTRTAYPFAQR
MKDAAMEDMLEPILRAYKATRQSAPGSSFPEAFGDWCHRLGADGVKSAAS
GVST*
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mRNA from alignment at H-elongata_contig64743:505..2936+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig64743.14065.1 ID=mRNA_H-elongata_contig64743.14065.1|Name=mRNA_H-elongata_contig64743.14065.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2432bp|location=Sequence derived from alignment at H-elongata_contig64743:505..2936+ (Himanthalia elongata Himel1 dioecious)
ATGCTGAAGAGCGCCCTGCGAGCGATCGTGGATAAATATCGCCTGACCAT
GGTGTGTTTGCCCAACCAGTCCATTATCTTCAAGGACATCGCCCCCGAGC
AGCGGGAGGGACTGGAGGCCATCCTCGCCAGCTACGGGGTGAAGCCCGTC
GAGCAGGTAGGTGCAGCTGGGCCCGCAGTCGTGGAAAAACGAAAATCACG
TCTAATTTGTGATACATATATTTGAGATTTAGCCTCTCGTCGAACCGTAC
ACGAGCGAAGCGCACGGTTCCCCGGCTTGGGTGTTTGTGCTACGTTGGGG
ATATAACATGGTGTCGATACGCTTCGTGGTTTTGCTCAAAAGATCGCTAT
AACCCCGGGCTGCCGTCTTTTATTTCGTTTTGTGTTGTTTTTTATTTTTA
CTCGTTGGTGAAATACGGCAGATCGATCCTCTGCTGCGGCTGTCAATGGC
GTGTCCCGCTCTGCCCATGTGCGGCCTCGCCATGACCGAGTCGGAGAGGC
GCACGCCGTCTTACATCGACCGCTTCCGCGCCATGCTCGACAGGTTACCT
TACATCCCGTTTCGGTCGTCGACATACCGTATTGCAGTAAAATACGACTA
AATATACATATCGAGAAATGTATGTAAATATGATTGTTGAGGACGGCGAA
AAGAATGGCTGCGAGAGACAATATTGCACTATTAATAATCATATACTAAT
AATATTAACCGATGAGGATACCTTCCTGTATTGTATGGCCTCGGTGGGTG
GATTGTGCAGTTTAACCACGGACGGCCTGATTTTGCTCTCTTTCAAATAT
AATGTTTTGTTCGGGGGGGGAGGGGGGAATCACAATGTTGAATGCAGCAG
GTAACTCAGTAAACCGCGGCTCCTCAGAGGGGGATAAGGAGGAGGGAAAT
GAGAGGGTCCCCACCGGGGACATCTCCCCTCCCTCCCCAAAAGAATCAGT
ACCCCTCGTCGCTCTTCCAATAATTTTCTTGCTGACCACGTAGAACGTGT
TTTTTTTTGTTTTTTTTCTTCCTCCTTTCGTTTATTTTGCTTACGACGCC
GTGTGCGCCTTCTCTTGCGTTCGAAATGAAGTGATTTATTGCGTGTGTGC
GATGAACCTGTGTGAACCTTGGCTCCGATTGGCTCCGATGACAGCGGGAT
CGGTGTGATGGAGTCACGGTTTGCCCATCTCGATCGCTTTCTCGCGCACG
GTGCACTCTTTCTTGACTTCCCTTTTGGTAGACTCTCTTACTCCCCCTCC
TATTTCGTGACCCGTTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTATACG
TGCATTAGGATCGGACTCGGGGACGAAGAAATCATGATTCGAATGACGGG
ATGTCCCAACGGGTGCGCAAGACCGTACATGGCTGAGCTCGCATTTGTCG
GAGACGGGCCGGATTCTTATCAGGTAACACTAAATGTAGTATTGTATACA
GTACTTAATATACAAGTATGGTACGTTTATAACTTGCCTCTCTGTCTACT
TCGTGTCCCGAGTGCTACTACTACTGCTGCTGCTGCTGCTGCTGCTGCTG
CTGTCTAGACACACGTTTGCATGCTCGCTCTTGTGAGAATTCATGATAGC
TCCTTGTCTAGCACAGCTCATAGTTGATGTATCGTTGTGGGGGAGAGGCG
GGGTGGGTGAAGCAGATAAACTTTTAACGTACTTGAAAGGACACTTTTAA
ATCGATTTCAGGGCGAAAGGGATGGAGAATAGAGAAGCCGAGGGGTGCCT
GGCTACATCAAATTTATACAGGCCCATGTACGATTAGCGGAGTGGGTCGC
CTTTCGACACAAATATGACCCAGGTCTTCCCCCACGAGAAAATATTTACC
GGCCTTTGCGCCGTTGCTGGCTCTCAGGTTTGGCTCGGGGGTAGCCCCGC
GAACACTCGAACAGCCTACCCTTTTGCGCAGCGAATGAAGGACGCTGCGA
TGGAGGACATGCTCGAGCCCATATTGCGGTGCGTTTTACCGGCACATCGC
TAGCGTGTTCGACCGCAGATTGTTTCCGAACGTTCGAAACAGGCGATGCT
CATTCATGGAACGAAACGGAATGGAACAGAACATAACGCTAGGGCTCGTT
ATGGGCGATTCGCTCCTCCGCTAGACGCCGCGAGCCAACCAAGTAAATCG
TTTGCCGACGTAGACTAGAGACACGTGTACGCGCGTGGATGGTCCCCCCG
CGTTGTTGTGTCTCACCTGGAAAGGTATGTTTGTTCCATCACCCCCATCG
CACTACCGCCTGTCTGTTTGACTGTCTTTCTGCCCGCTTGTTTGTGTCCA
AAACCTACTAGCGCGTACAAGGCGACTCGACAGAGCGCGCCGGGATCGAG
CTTTCCGGAGGCTTTCGGAGACTGGTGCCACCGCCTCGGAGCCGATGGTG
TGAAATCGGCAGCTTCCGGGGTGTCGACTTAA
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Coding sequence (CDS) from alignment at H-elongata_contig64743:505..2936+

>mRNA_H-elongata_contig64743.14065.1 ID=mRNA_H-elongata_contig64743.14065.1|Name=mRNA_H-elongata_contig64743.14065.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1230bp|location=Sequence derived from alignment at H-elongata_contig64743:505..2936+ (Himanthalia elongata Himel1 dioecious)
ATGCTGAAGAGCGCCCTGCGAGCGATCGTGGATAAATATCGCCTGACCAT
GGTGTGTTTGCCCAACCAGTCCATTATCTTCAAGGACATCGCCCCCGAGC
AGCGGGAGGGACTGGAGGCCATCCTCGCCAGCTACGGGGTGAAGCCCGTC
GAGCAGATGCTGAAGAGCGCCCTGCGAGCGATCGTGGATAAATATCGCCT
GACCATGGTGTGTTTGCCCAACCAGTCCATTATCTTCAAGGACATCGCCC
CCGAGCAGCGGGAGGGACTGGAGGCCATCCTCGCCAGCTACGGGGTGAAG
CCCGTCGAGCAGATCGATCCTCTGCTGCGGCTGTCAATGGCGTGTCCCGC
TCTGCCCATGTGCGGCCTCGCCATGACCGAGTCGGAGAGGCGCACGCCGT
CTTACATCGACCGCTTCCGCGCCATGCTCGACAGATCGATCCTCTGCTGC
GGCTGTCAATGGCGTGTCCCGCTCTGCCCATGTGCGGCCTCGCCATGACC
GAGTCGGAGAGGCGCACGCCGTCTTACATCGACCGCTTCCGCGCCATGCT
CGACAGGATCGGACTCGGGGACGAAGAAATCATGATTCGAATGACGGGAT
GTCCCAACGGGTGCGCAAGACCGTACATGGCTGAGCTCGCATTTGTCGGA
GACGGGCCGGATTCTTATCAGGATCGGACTCGGGGACGAAGAAATCATGA
TTCGAATGACGGGATGTCCCAACGGGTGCGCAAGACCGTACATGGCTGAG
CTCGCATTTGTCGGAGACGGGCCGGATTCTTATCAGGTTTGGCTCGGGGG
TAGCCCCGCGAACACTCGAACAGCCTACCCTTTTGCGCAGCGAATGAAGG
ACGCTGCGATGGAGGACATGCTCGAGCCCATATTGCGGTTTGGCTCGGGG
GTAGCCCCGCGAACACTCGAACAGCCTACCCTTTTGCGCAGCGAATGAAG
GACGCTGCGATGGAGGACATGCTCGAGCCCATATTGCGCGCGTACAAGGC
GACTCGACAGAGCGCGCCGGGATCGAGCTTTCCGGAGGCTTTCGGAGACT
GGTGCCACCGCCTCGGAGCCGATGGTGTGAAATCGGCAGCTTCCGGGGTG
TCGACTTAACGCGTACAAGGCGACTCGACAGAGCGCGCCGGGATCGAGCT
TTCCGGAGGCTTTCGGAGACTGGTGCCACCGCCTCGGAGCCGATGGTGTG
AAATCGGCAGCTTCCGGGGTGTCGACTTAA
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