prot_H-elongata_contig64673.14060.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig64673.14060.1
Unique Nameprot_H-elongata_contig64673.14060.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length53
Homology
BLAST of mRNA_H-elongata_contig64673.14060.1 vs. uniprot
Match: D7FHG1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHG1_ECTSI)

HSP 1 Score: 84.7 bits (208), Expect = 2.600e-18
Identity = 39/53 (73.58%), Postives = 45/53 (84.91%), Query Frame = 0
Query:    1 QTQRWFRCLEANYLKAKCLLLETFLSQLLFEVPTPAMLLTFVGAQQEDLLRRK 53
            QTQRWFRCLEANYLK KC LLE FL+Q LFEVPTP++L+ FVGAQQ   +RR+
Sbjct:  262 QTQRWFRCLEANYLKTKCSLLERFLAQFLFEVPTPSLLMNFVGAQQPGFVRRR 314          
BLAST of mRNA_H-elongata_contig64673.14060.1 vs. uniprot
Match: A0A835ZFA2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFA2_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 3.640e-12
Identity = 31/48 (64.58%), Postives = 39/48 (81.25%), Query Frame = 0
Query:    2 TQRWFRCLEANYLKAKCLLLETFLSQLLFEVPTPAMLLTFVGAQQEDL 49
            TQRWFRCLEANYL+ KC  LE F+  LLFE+P+P++LLTFV A ++ L
Sbjct:  188 TQRWFRCLEANYLRTKCYYLEKFIGCLLFELPSPSLLLTFVQAPRDIL 235          
BLAST of mRNA_H-elongata_contig64673.14060.1 vs. uniprot
Match: A0A835YXN3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXN3_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 6.120e-6
Identity = 23/45 (51.11%), Postives = 30/45 (66.67%), Query Frame = 0
Query:    3 QRWFRCLEANYLKAKCLLLETFLSQLLFEVPTPAMLLTFVGAQQE 47
            Q W+RCL   YL+ KCLLLE +LSQ+LF+ P    LL FV +  +
Sbjct:  170 QPWYRCLNTEYLRRKCLLLEGYLSQVLFDAPEVNQLLEFVASSAQ 214          
BLAST of mRNA_H-elongata_contig64673.14060.1 vs. uniprot
Match: D7G5E1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5E1_ECTSI)

HSP 1 Score: 49.3 bits (116), Expect = 2.170e-5
Identity = 23/38 (60.53%), Postives = 29/38 (76.32%), Query Frame = 0
Query:    6 FRCLEANYLKAKCLLLETFLSQLLFEVPTPAMLLTFVG 43
            +RCL  +YL  KC LLETFL Q+LF +PTPA+L+ FV 
Sbjct:  360 YRCLNPDYLAHKCNLLETFLQQVLFAMPTPALLIHFVS 397          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig64673.14060.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FHG1_ECTSI2.600e-1873.58Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZFA2_9STRA3.640e-1264.58Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YXN3_9STRA6.120e-651.11Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G5E1_ECTSI2.170e-560.53Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig64673contigH-elongata_contig64673:3050..3208 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig64673.14060.1mRNA_H-elongata_contig64673.14060.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig64673 3050..3208 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig64673.14060.1 ID=prot_H-elongata_contig64673.14060.1|Name=mRNA_H-elongata_contig64673.14060.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=53bp
QTQRWFRCLEANYLKAKCLLLETFLSQLLFEVPTPAMLLTFVGAQQEDLL
RRK
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