mRNA_H-elongata_contig6464.14058.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig6464.14058.1 vs. uniprot
Match: D7FKR5_ECTSI (Iron-sulfur cluster assembly protein, similar to nifU n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKR5_ECTSI) HSP 1 Score: 576 bits (1485), Expect = 5.160e-198 Identity = 306/419 (73.03%), Postives = 347/419 (82.82%), Query Frame = 2
Query: 2 RGLHDMLYGDDEDHGATDSGESSEYLESFDGKSIYEVSQWLKDNADSKLAAVYAMVGRDEAVKFVGVSRNVVLSVAAHVANEDEDNVTSLKVRSFKFPKREKMEACKKHWIENCAFTPIGNIEGREWSTTSKDAQDAMSPAQREAYEENKLKMRKAIADPSLVDEMEQMSSEDIDRRKRLEAAVEDDDWSNVIDGQTRLTEDEKSTEDTKTSVEVPTATIISPFDSNGMPMGVGPDGMAVA-LSPEAVHPTSSA-----TFESNHLEFTLENVDKVLDEVRPYLVADGGNVRVMGVDIESKIVKLALQGACGTCPSSTTTMKMGIERVLKENFPDMDGVEQVDEAGGDAMAEATVAVVEAILEPLRPAMVAMRAKVQVLSASDGDVKLSYSGHRKVAYGVEMALLDNPLIRTVEFEYLD 1240
RGLHD LY ++EDHGAT S S +E FDG +YEVS+WLKDNA+SK AAVYA+VG+DE V FVGV RNV LS+AAH+A E E V LKVRSFKFPKR+KMEA K WIE C TP+GNI+G EW+T SKDAQ+AMSPAQ+EAYEENKLKMRKAIADP LV+E EQMSSEDI+RRKRLE+AVEDDDWS+VIDGQT+LTE+ K V+ PTATIISPF S+GMP+GVGPDGMA L P P A E N LEFTLENVDKVLDEVRPYL+ADGGNVRVMGVDI+ ++VKLALQGACG+CPSSTTTMKMGIERVL ENF +M GVEQVDEA G+AMAEAT AVVEAILEPLRPAMVAMRAKV+VLS DG VKL+YSGHRKVAYG++MALLDNPLI++++FEY+D
Sbjct: 85 RGLHDFLYSNEEDHGATASDGS---VELFDGTQLYEVSKWLKDNAESKHAAVYAVVGKDEKVNFVGVGRNVALSLAAHLAAEGESMVHMLKVRSFKFPKRDKMEALKAQWIEECGSTPVGNIKGSEWATGSKDAQNAMSPAQKEAYEENKLKMRKAIADPGLVEETEQMSSEDIERRKRLESAVEDDDWSSVIDGQTKLTEEPK------VEVDAPTATIISPFSSDGMPVGVGPDGMAAPPLPPXXXXPVPDAPPTPPASECNDLEFTLENVDKVLDEVRPYLIADGGNVRVMGVDIDRRVVKLALQGACGSCPSSTTTMKMGIERVLNENFLNMGGVEQVDEASGNAMAEATTAVVEAILEPLRPAMVAMRAKVEVLSVLDGHVKLTYSGHRKVAYGIQMALLDNPLIQSIDFEYVD 494
BLAST of mRNA_H-elongata_contig6464.14058.1 vs. uniprot
Match: A0A836CLJ7_9STRA (NifU-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLJ7_9STRA) HSP 1 Score: 354 bits (909), Expect = 7.820e-112 Identity = 197/408 (48.28%), Postives = 262/408 (64.22%), Query Frame = 2
Query: 5 GLHDMLYGDDEDHGATDSGESSEYLESFDGKSIYEVSQWLKDNADSKLAAVYAMVGRDEAVKFVGVSRNVVLSVAAHVANEDEDNVTSLKVRSFKFPKREKMEACKKHWIENCAFTPIGNIEGREWSTTSKDAQDAMSPAQREAYEENKLKMRKAIADPSLVDEMEQMSSEDIDRRKRLEAAVEDDDWSNVIDGQTRLTEDEKSTEDTKTSVEVPTATIISPFDSNGMPMGVGPDGMAVALSPEAVHPTSSATFESNHLEFTLENVDKVLDEVRPYLVADGGNVRVMGVDIESKIVKLALQGACGTCPSSTTTMKMGIERVLKENFPDMDGVEQVDEAGGDAMAEATVAVVEAILEPLRPAMVAMRAKVQVLSASDGDVKLSYSGHRKVAYGVEMALLDNPLIRTVEF 1228
GLHD LYGD EDHGAT G ++ E F G Y V++WLK +SK+AAVY+++G + + FVG+SRNV +S+ H+ NE + V +++SF++PKR +MEA ++ W+ P GN G EW+ T KDA AM+ QR +YEE KLKMRKAIAD SLVDE+E + RR L+A+VE+DDWS VI+ QT T + E T ++ T + E L+FT++NVDKVLDEVRPYL+ADGGN RV+ VD E+++V LALQGACG+CPSST TM+MGIERVLKENF ++ GV +V+E GG +A+ T VVE+ILEP+RPA+ AM +V+V+S DG V L YSG K+ YG+E+A DNPL+ V+F
Sbjct: 82 GLHDFLYGDQEDHGATSKGAAAGG-EEFIGNRSYSVTEWLKQYGNSKIAAVYSVIGANGKLAFVGMSRNVAISLQCHLQNEGPNKVALARIQSFRYPKRSEMEALREQWLAAAEDVPEGNTPGNEWAQTIKDAASAMAAEQRGSYEEMKLKMRKAIADTSLVDELEAQDLDSETRRANLQASVENDDWSAVINQQTAATVTPRPEEVTTXXXXXXXXELLG---------------------------TGAEPLECRALDFTIDNVDKVLDEVRPYLIADGGNCRVVAVDQETRVVSLALQGACGSCPSSTVTMQMGIERVLKENFENLGGVVRVEEDGG-GLAQVTADVVESILEPIRPAIKAMNGQVKVVSVFDGVVTLGYSGSPKIKYGIELACKDNPLVHQVKF 460
BLAST of mRNA_H-elongata_contig6464.14058.1 vs. uniprot
Match: A0A0G4ERY6_VITBC (GIY-YIG domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ERY6_VITBC) HSP 1 Score: 246 bits (627), Expect = 1.430e-69 Identity = 163/435 (37.47%), Postives = 241/435 (55.40%), Query Frame = 2
Query: 2 RGLHDMLYGD---DEDHGATDSGESSEYLESFDGKSIYEVSQWLKDNADSKLAAVYAMVGRDEAVKFVGVSRNVVLSVAAHVANEDEDNVTSLKVRSFKFPKREKMEACKKHWIENCAFTPIGNIEGR-EWSTTSKDAQ-DAMSPAQREAYEENKLKMRKAIADPSLVDEMEQMSSEDIDRRKRLEAAVEDDDWSNVIDGQTRLTEDEK------------STEDTKTSVEVPTATIISPFDSNGMPMGVGPDGMAVALSPEAVHPTSSATFESNHLEFTLENVDKVLDEVRPYLVADGGNVRVMGVDIESKIVKLALQGACGTCPSSTTTMKMGIERVLKENFPDMDGVEQVDEAGGDAMAEAT----VAVVEAILEPLRPAMVAMRAKVQVLSASDGDVKLSYSGHR--KVAYGVEMALLD---NPLIRTVEF 1228
RGLH LY D D+ H A +G FDG ++Y V +WL + + ++ VY+++ D +V++VGVSRNV +++ +H V ++++S+ +P+RE+M+A + WI P GN + ++ T KDA D M +R+ Y +NKLK+R+A+AD +L+DE + E+I R+ L A++DDDWS VIDGQT T + + +DT T + A ++SPF P G D +A + A L T++NVD+VLD+VRPYL ADGGNV V+ VD K + LALQGACG CPSS T+KMGIER+LKE +PD++ V V + A A V ++E LE +R + M A V+ A DG L Y+G ++ +G+E+ L D N ++ VEF
Sbjct: 99 RGLHSFLYDDGKEDDAHAAKPAGSRGRVR--FDGVNMYGVDRWLGMHREERVCGVYSVLDEDRSVQYVGVSRNVAVALESHRRQTPPGTVAFVRIKSWDYPRREEMDALRDEWIRESGRVPPGNEDASLGFAETIKDASTDGMKDDERQQYHDNKLKLRRAMADNTLIDETPNIIEEEIMNREALLHALKDDDWSAVIDGQTNATLNPQLINAQLQEALKIGRDDTSTDTQGE-ANVVSPF----APGRQGDDAVAARTAEPA-----------ESLPLTVDNVDRVLDDVRPYLQADGGNVMVVAVDPTHKTISLALQGACGNCPSSQMTLKMGIERLLKETWPDLNDVVPVSDPSSPHAAPAPLPFGVELIERHLEEVRWGLNGMGASCDVIEAKDGRAVLRYAGPDPGRITFGIELMLKDAVPNNQLQVVEF 515
BLAST of mRNA_H-elongata_contig6464.14058.1 vs. uniprot
Match: M2Y5J2_GALSU (Iron-sulfur cluster scaffold protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y5J2_GALSU) HSP 1 Score: 227 bits (578), Expect = 2.150e-63 Identity = 152/415 (36.63%), Postives = 228/415 (54.94%), Query Frame = 2
Query: 2 RGLHDMLYGDDEDHGATDSGESSEYLESFDGKSIYEVSQWLKDNADSKLAAVYAMVGRDEAVKFVGVSRNVVLSVAAHVANEDEDNVTSLKVRSFKFPKREKMEACKKHWIENCAFTPIGNI----EGREWSTTSKDAQDAMS----PAQREAYEENKLKMRKAIADPSLVDEMEQMSSEDIDRRKRLEAAVEDDDWSNVIDGQTRLTEDEKSTEDTKTSVEVPTATIISPFDSNGMPMGVGPDGMAVALSPEAVHPTSSATFESNHLEFTLENVDKVLDEVRPYLVADGGNVRVMGVDIESKIVKLALQGACGTCPSSTTTMKMGIERVLKENFPDMDGVEQVDEAGGDAMAEATVAVV---------EAILEPLRPAMVAMRAKVQVLSASDGDVKLSYSGHRKVAYGVEMAL 1195
R LH+ LY E+ T S + ++ DG + V +L D K+ AVYA+ + ++F+G+SR+V ++ AH + +V L+++++ FP+R +ME C+K WI FTP GNI E + W+ + K+A ++ P ++ YEE K K+RKA+ADPSL+DE S +I R A+ + DWS VI+ Q S +V + SPF+S + VA + ++S T ES T+ENV+ VLDEVRPYL +DGGNV+V+ VD +V L LQGACGTCPSSTTTMK+GIER+L++ FP++ G+ +A++ VA V E++LE +RPA++ + + V + V L Y G K+ YG+E+AL
Sbjct: 66 RSLHETLYSRGEEEHKTPSKQQVKFRS--DGSNWLPVDLFLNGMEDEKVGAVYAVYDANRDIRFIGISRDVCFALKAHREALSDRDVAWLRLKTWDFPRRVEMEQCQKDWIAELGFTPPGNITTNEESKLWAKSIKEATQLVASDVEPERKSTYEEKKFKLRKAMADPSLIDE----ESREIFERDPTIHAISEGDWSKVIEQQ---------------SNKVLQDAVTSPFESVEV----------VANNNRVDERSNSNTAESGSF-LTVENVNLVLDEVRPYLESDGGNVKVLSVDTNRNVV-LLLQGACGTCPSSTTTMKLGIERILRQRFPNI----------GEIVAQSEVASVTTIPLEERCESLLEEIRPAIIGLGGSISVSRVENNQVFLLYQGPDKIKYGIELAL 437
BLAST of mRNA_H-elongata_contig6464.14058.1 vs. uniprot
Match: A0A4D9CNN7_9STRA (NifU domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CNN7_9STRA) HSP 1 Score: 223 bits (569), Expect = 1.800e-61 Identity = 162/428 (37.85%), Postives = 235/428 (54.91%), Query Frame = 2
Query: 2 RGLHDMLYGDDEDHG--ATDSGESSEYLESFDGKSIYEVSQWLKDNADSKLAAVYAMVGRDEAVKFVGVSRNVVLSVAAHVANEDEDNVTSLKVRSFKFPKREKMEACKKHWIENCAFT---PIGNIEGRE-----WSTTSKDAQDAMSPAQREAYEENKLKMRKAIADPSLVDEMEQMSSED----------IDRRKRLEAAVEDDDWSNVIDGQTRLTEDEKSTEDTKTSVEVPTATIISPFDSNGMPMGVGPDGMAVALSPEAVHPTSSATFESNHLEFTLENVDKVLDEVRPYLVADGGNVRVMGVDIESKIVKLALQGACGTCPSSTTTMKMGIERVLKENFPDMDGVEQVDEAG------GDAMAEATVAVVEAILEPLR---PAMVAMRAKVQVLSASD-GDVKLSYSGHRKVAYGVEMAL 1195
+GLH+ LYGDD+ HG A +G +S G + + +LKD D++LAAVY + +++VGV+RNVV+++ H+ + V S+ + SF++PKRE+M A + W+E A T P GN E W+ + ++ ++ A+ + K K+R A+ADP+L DE+E + E+ RR +L+AAVE+ DWS +I+GQTR T E + + + + I SPF G G TS T ++ LE T ENVD+VL+EVRPYL+ADGGN+ V+ +D ++ + L LQGACG+CPSSTTTMKMG+ERVL+E F + VE V +A G + E T A+ + E LR PA+ + A + S+ G VKL Y G KV GV AL
Sbjct: 87 KGLHEFLYGDDDAHGTRAPPAGSTSTSFTRAQGP--FPAASFLKDLQDTRLAAVYGVYDASGTLRYVGVTRNVVMALEGHLQAHGPEVVASVALESFRYPKREEMAAVQASWLEEVAATGQNPEGNRSEGEGGSGGWAKSIREVVES-GAGLGGAHADTKTKLRTAMADPTLQDELEDLDEEEEYXXXXXXXRSARRAQLKAAVEESDWSGMIEGQTRSTIPEGTRD---AAAKEGGGEIASPFREGGA-------GSPSXXXXXXXXXTSLPTEDT--LELTPENVDRVLEEVRPYLIADGGNIEVVRIDQVARDIFLRLQGACGSCPSSTTTMKMGVERVLREKFTQLGSVEAVSDAPLSVDETGSPLTE-TAALERKLEEKLREILPAIRGLGASASIGGVSEEGVVKLVYQGPEKVKMGVVYAL 498
BLAST of mRNA_H-elongata_contig6464.14058.1 vs. uniprot
Match: A0A0C9S224_9SPER (TSA: Wollemia nobilis Ref_Wollemi_Transcript_21987_1714 transcribed RNA sequence n=2 Tax=Araucariaceae TaxID=25664 RepID=A0A0C9S224_9SPER) HSP 1 Score: 213 bits (542), Expect = 4.500e-58 Identity = 155/414 (37.44%), Postives = 219/414 (52.90%), Query Frame = 2
Query: 5 GLHDMLYGDD--EDHGATDSGESSEYLESFDGKSIYEVSQWLKDNADSKLAAVYAMVGRDEAVKFVGVSRNVVLSVAAHVANEDEDNVTSLKVRSF---KFPKREKMEACKKHWIENCAFTPIGNIEGREW-STTSKDAQDAMSPAQREAYEENKLKMRKAIADPSLVDEMEQMSSEDIDRRKRLEAAVEDDDWSNVIDGQTRLTEDEKSTEDTKTSVEVPTATIISPFDSNGMPMGVGPDGMAVALSPEAVHPTSSATFESNHLEFTLENVDKVLDEVRPYLVADGGNVRVMGVDIESKIVKLALQGACGTCPSSTTTMKMGIERVLKENFPD-MDGVEQVDEAGGDAMAEATVAVVEAILEPLRPAMVAMRAKVQVLSASDGDVKLSYSGHRKVAYGVEMALLDN-PLIRTV 1222
GLH LYGD E H +++ E DG SI ++ + K VYA+ + +++VG SRNVVLS+ +H+ S++V+ F R K+E KK W+E P +++ W S D+ AMS +R+ YEE KLK+RKA+ + +L D++E + RR L +A E DDWS VIDGQT+ T + +++ ++SPF NG G S + + + T +NVD VL++VRPYL+ADGGNV V V E ++ L LQGACGTCPSSTTTMKMGIERVLKE F D + + QVD+ ATVA V + L+ LRPA+ V+V+S GD + Y+G + G++ A+ D P I+ V
Sbjct: 83 GLHGFLYGDKGAELHSLQTQQITAKAGED-DGSSIMPFQAYVSARDNLKFGGVYAIYDTQDQIQYVGYSRNVVLSLKSHLERVGPSRCCSVRVKMFTDSSILSRGKLEEEKKRWLEVYGVPPGNSVDKELWESGKGIDSVRAMSEEERKEYEEKKLKLRKAMGE-NLYDDVEGEDEDSRVRRLNLLSATEGDDWSGVIDGQTKETLQQGDPQNSN---------VVSPFSGNGNENG------------------KSGLYSAATYDLTAQNVDLVLNDVRPYLIADGGNVEVASV--EDGVISLRLQGACGTCPSSTTTMKMGIERVLKEKFGDALREIRQVDQED----MSATVASVNSHLDMLRPAIHNYGGSVEVISIEAGDCHVKYNGPGPIGMGIKAAIKDKFPDIKNV 461
BLAST of mRNA_H-elongata_contig6464.14058.1 vs. uniprot
Match: B8LLX0_PICSI (GIY-YIG domain-containing protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=B8LLX0_PICSI) HSP 1 Score: 208 bits (529), Expect = 3.090e-56 Identity = 151/406 (37.19%), Postives = 214/406 (52.71%), Query Frame = 2
Query: 5 GLHDMLYGD--DEDHGATDSGESSEYLESFDGKSIYEVSQWLKDNADSKLAAVYAMVGRDEAVKFVGVSRNVVLSVAAHVANEDEDNVTSLKVRSFKFPK---REKMEACKKHWIENCAFTPIGNIEGREWSTTSKDAQDAMSPAQREAYEENKLKMRKAIADPSLVDEMEQMSSEDIDRRKRLEAAVEDDDWSNVIDGQTRLTEDEKSTE-DTKTSVEVPTATIISPFDSNGMPMGVGPDGMAVALSPEAVHPTSSATFESNHLEFTLENVDKVLDEVRPYLVADGGNVRVMGVDIESKIVKLALQGACGTCPSSTTTMKMGIERVLKENFPD-MDGVEQVDEAGGDAMAEATVAVVEAILEPLRPAMVAMRAKVQVLSASDGDVKLSYSGHRKVAYGVEMALLD 1201
GLH LYG+ E HG+ +++ E DG SI ++ + A VYA+ ++ +++VG +RNVV+S+ +H+ S++V+ F P R ++E K W++ P + + W + AMS +R+ YEE KLK+RKA+ + +L DE+E E RR L A E DDWS VID QT+ T +EK E + E A I SPF NG ++S + + + T ENVD VL++VRPYLVADGGNV V V E ++ L LQGACGTCPSSTTTMKMGIERVLKE F D + + QVD+ ATV V + L+ LRPA+ V+V+S + Y+G ++ G++ A+ D
Sbjct: 75 GLHGFLYGEKGSEVHGSQTQQITAKPGED-DGSSIIPFEDYVNTRGNLNFAGVYAIYNNEDQIQYVGYARNVVMSLKSHMDKVGPSRCCSVRVKIFTDPSLLSRGRLEQEKNKWLDEYGLPPGNSTDQDLWDCGRVLSIKAMSEEERKDYEEKKLKLRKAMGE-NLYDEVEGEDEESSIRRLNLLRATEGDDWSGVIDRQTKETLEEKCEETQNNNNNEQTNAGIASPFSDNGK--------------------STSGLYSAVTHDLTPENVDLVLNDVRPYLVADGGNVEVASV--EDGVISLRLQGACGTCPSSTTTMKMGIERVLKEKFGDVLKEIRQVDQQN----IHATVVSVNSHLDMLRPAIHNYGGSVEVISIEGEICHVKYNGPDQIGVGIQAAIKD 452
BLAST of mRNA_H-elongata_contig6464.14058.1 vs. uniprot
Match: A0A7S2SCE1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SCE1_9STRA) HSP 1 Score: 202 bits (515), Expect = 8.740e-55 Identity = 142/415 (34.22%), Postives = 207/415 (49.88%), Query Frame = 2
Query: 2 RGLHDMLYGDDEDHGA--TDSGESSEYLESFDGKSIYEVSQWLKDNADSKLAAVYAMVGRDEAVKFVGVSRNVVLSVAAHVANEDEDNVTSLKVRSFKFPKREKMEACKKHWIENCAFTPIGNIEGREWSTTSKDAQD-AMSPAQREAYEENKLKMRKAIADPSLVDEMEQMSSEDIDRRKRLEAAVEDDDWSNVIDGQTRLTEDEKSTEDTKTSVEVPTATIISPFDSNGMPMGVGPDGMAVALSPEAVHPTSSATFESNHLEFTLENVDKVLDEVRPYLVADGGNVRVMGVDIESKIVKLALQGACGTCPSSTTTMKMGIERVLKENFPDMDGVEQVDEAGGDAMAEATVAVVEAILEPLRPAMVAMRAKVQVLS--ASDGDVKLSYSGHRKVAYGVEMALLDNPLIRTVEFE 1231
+GLH LY D+ H A T G +S E+ V +W K+AAVYA+ + ++VG++R++ +S+AAH+ + V S +V + FP + ME + W+ + + + G WS+T+ A+ A PA AYE+ KLK+RKA+AD +L D D DWS + QT ++ G + AT + L+FT+EN+D+VLDEVRPYLVADGGN++V+ ++ E + + + LQGACG+CPSSTTTMKMG+ERVLKE +PD+ V V E D AE + A VEA L L PA+ + V V S A+ G V+L Y G + + G++ AL D+ + V F
Sbjct: 70 KGLHSFLYSDEASHEASTTQDGVASVADETR------LVEEWAAAFGAKKVAAVYAVFDTEGVARYVGITRHLTMSLAAHLREKSPSVVHSARVTTVSFPSKAAMEEVQAAWMAEYGLS-VEALNGDSWSSTTASARAVAEDPADMAAYEDTKLKLRKAMADTTLAD-----------------GEQGDSDWSQAVSDQTS--------------------------EATG----------------------NQATASAGGLDFTMENIDQVLDEVRPYLVADGGNIKVLSIEPEPRNIIVELQGACGSCPSSTTTMKMGVERVLKEQWPDLGEVVSVSETA-DLAAELSTADVEAKLAQLLPAITGLGGAVTVASVDAASGKVELEYKGPKALRGGIDQALRDDKRVTEVLFS 411
BLAST of mRNA_H-elongata_contig6464.14058.1 vs. uniprot
Match: A0A176VPP8_MARPO (NifU domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VPP8_MARPO) HSP 1 Score: 204 bits (519), Expect = 1.210e-54 Identity = 157/423 (37.12%), Postives = 223/423 (52.72%), Query Frame = 2
Query: 2 RGLHDMLYGDDEDHGATDSGESSEYLESF-------DGKSIYEVSQWLKDNADSKLAAVYAMVGRDEAVKFVGVSRNVVLSVAAHVANEDEDNVTSLKVRSFKFPK---REKMEACKKHWIENCAFTPIGNI-EGREWSTTSKDAQ-DAMSPAQREAYEENKLKMRKAIADPSLVDEMEQMSSEDIDRRKRLEAAVEDDDWSNVIDGQTRLTEDEKSTEDTKTSVEVPTATIISPFDSNGMPMGVGPDGMAVALSPEAVHPTSSATFESNHLEFTLENVDKVLDEVRPYLVADGGNVRVMGVDIESKIVKLALQGACGTCPSSTTTMKMGIERVLKENFPD-MDGVEQVDEAGGDAMAEATVAVVEAILEPLRPAMVAMRAKVQVLSASD--GDVKLSYSGHRKVAYGVEMALLDN-PLIRTV 1222
+GLH LYG+ G D S ++ F DG +I +++ K + VY + + ++FVG SRNVVLS+ H A + S++V+ F R K+E +K W+ A P GN E W +S A M+ +R+ YEE KLKMRKA+ + +L D+++ + R +L A E DDWS+VIDGQT+ T + E P A I+SPF ++ + + + ++ E T+ENVD VL+EVRPYL+ADGGNV V V + +V L LQGACGTCPSSTTTMKMGIERVL E F + + GV QVD+ AT+ V + L+ LRPA++ V+V+S S G+V + Y G + G++ A+ D P I+TV
Sbjct: 91 KGLHGFLYGE----GGADIHTSG--IKEFAGRQGEDDGTTILGFEEYVAAREAVKFSGVYGVHNSNGGLEFVGYSRNVVLSLKTHRARVGAEKCASVRVKLFSVASIVSRAKLEEERKMWLMFAAEIPPGNSHENHLWEGSSAAAPLQHMTEEERKEYEEKKLKMRKAMGE-NLYDDVDGEDDDAKTIRMKLLQATEGDDWSSVIDGQTKQTIKPPPIAFDEVVDEAPAAQIVSPFSTS----------------------SKGSLYSADSYELTVENVDIVLNEVRPYLIADGGNVEV--VSLTDGVVSLRLQGACGTCPSSTTTMKMGIERVLNEKFGESLKGVVQVDQQE----IGATLGGVNSHLDMLRPAIINYGGSVEVVSVSPCRGEVVVKYKGPAPIGMGIQAAIKDKFPDIKTV 478
BLAST of mRNA_H-elongata_contig6464.14058.1 vs. uniprot
Match: A0A1X6PEC1_PORUM (NifU domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PEC1_PORUM) HSP 1 Score: 196 bits (499), Expect = 3.490e-53 Identity = 134/354 (37.85%), Postives = 184/354 (51.98%), Query Frame = 2
Query: 191 FVGVSRNVVLSVAAHVANEDEDNVTSLKVRSFKFPKREKMEACKKHWIENCA-FTPIGN-IEGREWSTTSKDAQDAMSPAQREAYEENKLKMRKAIADPSLVDEMEQMS--------------SEDIDRRKRLEAAVEDDDWSNVIDGQTRLTEDEKSTEDTKTSVEVPTATIISPFDSNGMPMGVGPDGMAVALSPEAVHPTSSATFESNHLEFTLENVDKVLDEVRPYLVADGGNVRVMGVDIESKIVKLALQGACGTCPSSTTTMKMGIERVLKENFPDMDGVEQVDEAGGDAMAEATVAVVEAILEPLRPAMVAMRAKVQVLSASDGDVKLSYSGHRKVAYGVEMALLDN 1204
FVG+SRNV +V AHVA SL V+++ +P R +M+AC+ W+ + A P GN ++W+++++D + EA E KLK+RKA+AD +LVDE E E RR L +AV +DDWS ID QT T + P A + LE T +NVD+VLD+VRPYL++DGGN+ V+ VD S V L L+GACG+C SSTTTMKMG+ERVL+E FP + V V EA VA VEA L+ +R A+ + V L+A++G+V L YSG K+AYG+E+ L D+
Sbjct: 2 FVGISRNVQAAVRAHVATRGRTEAASLVVKTWDYPSRSEMDACRDEWLADAAPDVPPGNGAAAQQWASSARDVSAVLGRDAGEA--EKKLKLRKAMADMTLVDEAEAADRAXXXXXXXXXXXXGEADARRSNLVSAVTEDDWSGEIDAQTAAT------------LSPPRAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAPTLELTPDNVDRVLDDVRPYLLSDGGNISVVSVDARSAAVVLRLEGACGSCASSTTTMKMGVERVLREAFPGLGDVSAVSEAPATPFG---VAAVEAALDNVRGALNGLGGSVSCLTAANGEVVLLYSGPPKLAYGIELMLRDS 338 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6464.14058.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig6464.14058.1 >prot_H-elongata_contig6464.14058.1 ID=prot_H-elongata_contig6464.14058.1|Name=mRNA_H-elongata_contig6464.14058.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=409bp MLYGDDEDHGATDSGESSEYLESFDGKSIYEVSQWLKDNADSKLAAVYAMback to top mRNA from alignment at H-elongata_contig6464:1358..7281- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig6464.14058.1 ID=mRNA_H-elongata_contig6464.14058.1|Name=mRNA_H-elongata_contig6464.14058.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5924bp|location=Sequence derived from alignment at H-elongata_contig6464:1358..7281- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig6464:1358..7281- >mRNA_H-elongata_contig6464.14058.1 ID=mRNA_H-elongata_contig6464.14058.1|Name=mRNA_H-elongata_contig6464.14058.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2454bp|location=Sequence derived from alignment at H-elongata_contig6464:1358..7281- (Himanthalia elongata Himel1 dioecious)back to top |