mRNA_H-elongata_contig64529.14040.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig64529.14040.1 vs. uniprot
Match: D8LTF8_ECTSI (Steroid-5-alpha-reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTF8_ECTSI) HSP 1 Score: 130 bits (327), Expect = 9.340e-36 Identity = 59/74 (79.73%), Postives = 66/74 (89.19%), Query Frame = 1
Query: 16 AGFLINYQSDGILRRLRGPGETGYKIPRGGMFEYISGANYFGECLEWCGFAIAGWSLPALAFALYTIANISPRA 237
AG IN QSDGILRRLR PGETGYKIP+GGMF Y+SGANYFGEC+ W GFAIAGWSLPA AFALYT++N++PRA
Sbjct: 162 AGMFINCQSDGILRRLRRPGETGYKIPQGGMFAYVSGANYFGECVGWIGFAIAGWSLPATAFALYTLSNLAPRA 235
BLAST of mRNA_H-elongata_contig64529.14040.1 vs. uniprot
Match: A0A7R9YDD7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDD7_9STRA) HSP 1 Score: 121 bits (303), Expect = 3.000e-32 Identity = 57/76 (75.00%), Postives = 61/76 (80.26%), Query Frame = 1
Query: 16 AGFLINYQSDGILRRLRGPGETGYKIPRGGMFEYISGANYFGECLEWCGFAIAGWSLPALAFALYTIANISPRAFQ 243
AG LIN QSDGILR LR PGETGYKIPRGGMFEYISGA+YFGE LEW GFA+A W L A AFA +T NI PRA+
Sbjct: 153 AGLLINVQSDGILRNLRKPGETGYKIPRGGMFEYISGAHYFGEILEWIGFAMASWRLRAAAFAFFTACNIGPRAYH 228
BLAST of mRNA_H-elongata_contig64529.14040.1 vs. uniprot
Match: A0A1S3KCQ5_LINUN (3-oxo-5-alpha-steroid 4-dehydrogenase (NADP(+)) n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3KCQ5_LINUN) HSP 1 Score: 120 bits (302), Expect = 7.020e-32 Identity = 54/75 (72.00%), Postives = 60/75 (80.00%), Query Frame = 1
Query: 19 GFLINYQSDGILRRLRGPGETGYKIPRGGMFEYISGANYFGECLEWCGFAIAGWSLPALAFALYTIANISPRAFQ 243
G +N SD +LR LR PGETGYKIPRGGMFEY+SGAN+FGECLEW GFAIA WSLPALAF ++T N PRAF
Sbjct: 177 GMFVNIHSDHVLRNLRKPGETGYKIPRGGMFEYVSGANFFGECLEWTGFAIACWSLPALAFCIFTWLNTGPRAFH 251
BLAST of mRNA_H-elongata_contig64529.14040.1 vs. uniprot
Match: A0A7S2XZJ2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZJ2_9STRA) HSP 1 Score: 119 bits (299), Expect = 1.310e-31 Identity = 55/81 (67.90%), Postives = 62/81 (76.54%), Query Frame = 1
Query: 1 IRLSIAGFLINYQSDGILRRLRGPGETGYKIPRGGMFEYISGANYFGECLEWCGFAIAGWSLPALAFALYTIANISPRAFQ 243
I L +AGF IN SDGILR+LR +GYKIPRGGMFEY+SGAN+FGE +EW GF AGWSLPA AFA +T NI PRA Q
Sbjct: 152 ITLFLAGFAINMHSDGILRKLRTNNSSGYKIPRGGMFEYVSGANFFGEIVEWTGFTFAGWSLPATAFAFFTFCNIGPRAIQ 232
BLAST of mRNA_H-elongata_contig64529.14040.1 vs. uniprot
Match: A0A6P4ZD89_BRABE (3-oxo-5-alpha-steroid 4-dehydrogenase (NADP(+)) n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4ZD89_BRABE) HSP 1 Score: 119 bits (297), Expect = 3.590e-31 Identity = 55/81 (67.90%), Postives = 66/81 (81.48%), Query Frame = 1
Query: 1 IRLSIAGFLINYQSDGILRRLRGPGETGYKIPRGGMFEYISGANYFGECLEWCGFAIAGWSLPALAFALYTIANISPRAFQ 243
I L +AG +IN +D ILR LR PGETGYKIP+GGMF Y+SGANYFGE +EW GFAIA WSLPA AFA++T +NI PRA++
Sbjct: 167 IVLFLAGMVINLHADHILRNLRKPGETGYKIPQGGMFTYVSGANYFGEIVEWTGFAIACWSLPAAAFAVFTASNIGPRAYR 247
BLAST of mRNA_H-elongata_contig64529.14040.1 vs. uniprot
Match: A0A8B7YL18_ACAPL (3-oxo-5-alpha-steroid 4-dehydrogenase (NADP(+)) n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7YL18_ACAPL) HSP 1 Score: 119 bits (297), Expect = 3.750e-31 Identity = 54/79 (68.35%), Postives = 62/79 (78.48%), Query Frame = 1
Query: 7 LSIAGFLINYQSDGILRRLRGPGETGYKIPRGGMFEYISGANYFGECLEWCGFAIAGWSLPALAFALYTIANISPRAFQ 243
L +G IN SD ILR LR PGETGYKIP GGMFEY+SGAN+FGE +EW GFAIA WSLP LAFA++T NI PRA++
Sbjct: 171 LFFSGMAINIHSDSILRNLRKPGETGYKIPHGGMFEYVSGANFFGEAVEWSGFAIACWSLPGLAFAIFTACNIGPRAYR 249
BLAST of mRNA_H-elongata_contig64529.14040.1 vs. uniprot
Match: UPI0018D62504 (3-oxo-5-alpha-steroid 4-dehydrogenase 1-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D62504) HSP 1 Score: 119 bits (297), Expect = 3.750e-31 Identity = 54/79 (68.35%), Postives = 64/79 (81.01%), Query Frame = 1
Query: 7 LSIAGFLINYQSDGILRRLRGPGETGYKIPRGGMFEYISGANYFGECLEWCGFAIAGWSLPALAFALYTIANISPRAFQ 243
L G IN QSD ILR LR PGETGYKIP+GGMFEYISGAN+FGE +EW GFA+A WSLP+LAF ++T +NI PRA++
Sbjct: 171 LFFTGMAINIQSDSILRNLRKPGETGYKIPKGGMFEYISGANFFGEVVEWTGFALACWSLPSLAFLVFTASNIGPRAYR 249
BLAST of mRNA_H-elongata_contig64529.14040.1 vs. uniprot
Match: UPI00071210C7 (3-oxo-5-alpha-steroid 4-dehydrogenase n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI00071210C7) HSP 1 Score: 118 bits (296), Expect = 4.130e-31 Identity = 55/79 (69.62%), Postives = 62/79 (78.48%), Query Frame = 1
Query: 7 LSIAGFLINYQSDGILRRLRGPGETGYKIPRGGMFEYISGANYFGECLEWCGFAIAGWSLPALAFALYTIANISPRAFQ 243
L IAG IN+QSD ILR LR G +GYKIP GGMFEY+SGANYFGEC+EW G+A W+L ALAFA +TIANI PRA Q
Sbjct: 159 LFIAGLSINWQSDAILRSLRADGSSGYKIPHGGMFEYVSGANYFGECIEWIGYACLCWNLGALAFAFFTIANIGPRALQ 237
BLAST of mRNA_H-elongata_contig64529.14040.1 vs. uniprot
Match: A0A497DW51_9BACT (3-oxo-5-alpha-steroid 4-dehydrogenase n=2 Tax=Candidatus Aminicenantes bacterium TaxID=2052149 RepID=A0A497DW51_9BACT) HSP 1 Score: 117 bits (293), Expect = 9.460e-31 Identity = 52/77 (67.53%), Postives = 65/77 (84.42%), Query Frame = 1
Query: 7 LSIAGFLINYQSDGILRRLRGPGETGYKIPRGGMFEYISGANYFGECLEWCGFAIAGWSLPALAFALYTIANISPRA 237
L I GF++N SD +LRRLR PGE GYKIPRGG+FEY+S ANYFGE +EW G+A+A WSLP LAFA++T+AN++PRA
Sbjct: 151 LFIGGFILNVYSDHLLRRLRKPGENGYKIPRGGLFEYVSCANYFGEIIEWFGWALATWSLPGLAFAIWTVANLAPRA 227
BLAST of mRNA_H-elongata_contig64529.14040.1 vs. uniprot
Match: A0A2G9UF28_TELCI (3-oxo-5-alpha-steroid 4-dehydrogenase n=1 Tax=Teladorsagia circumcincta TaxID=45464 RepID=A0A2G9UF28_TELCI) HSP 1 Score: 113 bits (283), Expect = 1.010e-30 Identity = 52/75 (69.33%), Postives = 59/75 (78.67%), Query Frame = 1
Query: 19 GFLINYQSDGILRRLRGPGETGYKIPRGGMFEYISGANYFGECLEWCGFAIAGWSLPALAFALYTIANISPRAFQ 243
G LIN SD ILR LR PGE GYKIPRGGMFEYISGAN+FGE +EW GFA+ SLPA++FA++T NI PRA Q
Sbjct: 26 GMLINIHSDSILRNLRKPGEVGYKIPRGGMFEYISGANFFGEIVEWTGFAVMSGSLPAISFAIFTACNIGPRAIQ 100 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig64529.14040.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig64529.14040.1 >prot_H-elongata_contig64529.14040.1 ID=prot_H-elongata_contig64529.14040.1|Name=mRNA_H-elongata_contig64529.14040.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=84bp IRLSIAGFLINYQSDGILRRLRGPGETGYKIPRGGMFEYISGANYFGECLback to top mRNA from alignment at H-elongata_contig64529:1786..3205+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig64529.14040.1 ID=mRNA_H-elongata_contig64529.14040.1|Name=mRNA_H-elongata_contig64529.14040.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1420bp|location=Sequence derived from alignment at H-elongata_contig64529:1786..3205+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig64529:1786..3205+ >mRNA_H-elongata_contig64529.14040.1 ID=mRNA_H-elongata_contig64529.14040.1|Name=mRNA_H-elongata_contig64529.14040.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=504bp|location=Sequence derived from alignment at H-elongata_contig64529:1786..3205+ (Himanthalia elongata Himel1 dioecious)back to top |