prot_H-elongata_contig64446.14032.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig64446.14032.1
Unique Nameprot_H-elongata_contig64446.14032.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length128
Homology
BLAST of mRNA_H-elongata_contig64446.14032.1 vs. uniprot
Match: D7FU31_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU31_ECTSI)

HSP 1 Score: 233 bits (594), Expect = 4.190e-76
Identity = 114/123 (92.68%), Postives = 120/123 (97.56%), Query Frame = 0
Query:    1 SKEIESTKSAKARGSNLRVHYKHMREVAHLIKGMKLSKSKQYLQDVLDYKRAVPFTMFTGGVGRHPQGKLPISKDYMGDPSTKTVPGNKHKHTFVSPGSKCRWPQKATRIVLDLVRNAESNAE 123
            SKEIE TKSAKARGSNLRVH+KHMREVAHLIKGMKLSK+K YLQDVL+YKRAVPFTMFTGGVGRH QGKLPI+KDYMGDPS+KTVPGNKHKHTFVSPGSKCRWPQKATRIVLDLV+NAESNAE
Sbjct:    5 SKEIEGTKSAKARGSNLRVHFKHMREVAHLIKGMKLSKAKVYLQDVLEYKRAVPFTMFTGGVGRHAQGKLPIAKDYMGDPSSKTVPGNKHKHTFVSPGSKCRWPQKATRIVLDLVKNAESNAE 127          
BLAST of mRNA_H-elongata_contig64446.14032.1 vs. uniprot
Match: A0A6V1UCU8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UCU8_HETAK)

HSP 1 Score: 132 bits (333), Expect = 9.610e-37
Identity = 69/120 (57.50%), Postives = 86/120 (71.67%), Query Frame = 0
Query:    5 ESTKSAKARGSNLRVHYKHMREVAHLIKGMKLSKSKQYLQDVLDYKRAVPFTMFTGGVGRHPQGKLPISKDYMGDPSTKTVPGNKHKHTFVSPGSKCRWPQKATRIVLDLVRNAESNAEV 124
            E  KS+KA+GS+LRVH+KHMREVAH IKGMKL+K+K +L+DVL +K+AV FT FTGG+G H QGKL                         +PG+KCRWPQKAT+IVLDL++NAE+NAEV
Sbjct:    9 EPEKSSKAKGSHLRVHFKHMREVAHNIKGMKLAKAKAFLEDVLQFKQAVTFTKFTGGIGHHAQGKL-----------------------RKAPGNKCRWPQKATKIVLDLLKNAEANAEV 105          
BLAST of mRNA_H-elongata_contig64446.14032.1 vs. uniprot
Match: A0A5D6XKD7_9STRA (Uncharacterized protein n=25 Tax=Oomycota TaxID=4762 RepID=A0A5D6XKD7_9STRA)

HSP 1 Score: 131 bits (329), Expect = 3.870e-36
Identity = 68/117 (58.12%), Postives = 82/117 (70.09%), Query Frame = 0
Query:    8 KSAKARGSNLRVHYKHMREVAHLIKGMKLSKSKQYLQDVLDYKRAVPFTMFTGGVGRHPQGKLPISKDYMGDPSTKTVPGNKHKHTFVSPGSKCRWPQKATRIVLDLVRNAESNAEV 124
            ++AKARGS+LRVH+KH REV+H IKGM LSK+K +L  VLDYK+AVPFT FTGG GRH QGKL  +                       PG KC+WPQKAT+I+LDLV+NAE+NAEV
Sbjct:   13 RAAKARGSHLRVHFKHCREVSHAIKGMPLSKAKSFLSAVLDYKQAVPFTKFTGGCGRHAQGKLRNA-----------------------PGDKCKWPQKATKIILDLVKNAEANAEV 106          
BLAST of mRNA_H-elongata_contig64446.14032.1 vs. uniprot
Match: W7TUF4_9STRA (60s ribosomal protein l17-2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUF4_9STRA)

HSP 1 Score: 129 bits (323), Expect = 2.570e-35
Identity = 69/125 (55.20%), Postives = 86/125 (68.80%), Query Frame = 0
Query:    1 SKEIES-TKSAKARGSNLRVHYKHMREVAHLIKGMKLSKSKQYLQDVLDYKRAVPFTMFTGGVGRHPQGKLPISKDYMGDPSTKTVPGNKHKHTFVSPGSKCRWPQKATRIVLDLVRNAESNAEV 124
            S+EI+   K+AKARGS+LRVH+KH+REV+H I G ++ K+KQ+L+DVL YKRAVPFT F GG+GRH QGKL                          PGS+C WPQKAT+IVLD++ NAESNAEV
Sbjct:    5 SREIDDPNKAAKARGSHLRVHFKHVREVSHTITGWQVGKAKQFLEDVLQYKRAVPFTRFKGGIGRHAQGKL-----------------------LSVPGSQCAWPQKATKIVLDMLTNAESNAEV 106          
BLAST of mRNA_H-elongata_contig64446.14032.1 vs. uniprot
Match: A0A485L8A8_9STRA (Aste57867_17649 protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A485L8A8_9STRA)

HSP 1 Score: 128 bits (322), Expect = 4.420e-35
Identity = 67/118 (56.78%), Postives = 80/118 (67.80%), Query Frame = 0
Query:    7 TKSAKARGSNLRVHYKHMREVAHLIKGMKLSKSKQYLQDVLDYKRAVPFTMFTGGVGRHPQGKLPISKDYMGDPSTKTVPGNKHKHTFVSPGSKCRWPQKATRIVLDLVRNAESNAEV 124
            T+SAKARG +LRVHYKH REV H IKG  L+K+K++L DVL+ K AVPFT +TGG GRH QGKL                         +PG KCRWPQKATRI+LDLV+NAE+NAE+
Sbjct:   12 TRSAKARGRHLRVHYKHCREVCHTIKGYSLAKAKKFLGDVLEMKAAVPFTKYTGGPGRHAQGKL-----------------------LNAPGDKCRWPQKATRIILDLVKNAEANAEL 106          
BLAST of mRNA_H-elongata_contig64446.14032.1 vs. uniprot
Match: A0A067CFI1_SAPPC (50S ribosomal protein L22 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CFI1_SAPPC)

HSP 1 Score: 125 bits (315), Expect = 4.910e-34
Identity = 64/118 (54.24%), Postives = 82/118 (69.49%), Query Frame = 0
Query:    7 TKSAKARGSNLRVHYKHMREVAHLIKGMKLSKSKQYLQDVLDYKRAVPFTMFTGGVGRHPQGKLPISKDYMGDPSTKTVPGNKHKHTFVSPGSKCRWPQKATRIVLDLVRNAESNAEV 124
            ++SAK+RGS+LRVH+KH REV H IKG+ + K+K++L+ VL+ K AVPFT FTGGVGRH QGK                       T  +PG KCRWPQKAT+I+LDLV+NAE+NAE+
Sbjct:   12 SRSAKSRGSHLRVHFKHCREVCHTIKGLPVGKAKKFLEAVLEKKAAVPFTKFTGGVGRHAQGK-----------------------TLNAPGDKCRWPQKATKIILDLVKNAEANAEL 106          
BLAST of mRNA_H-elongata_contig64446.14032.1 vs. uniprot
Match: A0A7S1TQM1_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQM1_9STRA)

HSP 1 Score: 124 bits (311), Expect = 1.980e-33
Identity = 67/117 (57.26%), Postives = 80/117 (68.38%), Query Frame = 0
Query:    8 KSAKARGSNLRVHYKHMREVAHLIKGMKLSKSKQYLQDVLDYKRAVPFTMFTGGVGRHPQGKLPISKDYMGDPSTKTVPGNKHKHTFVSPGSKCRWPQKATRIVLDLVRNAESNAEV 124
            KSAKARGS+LRVH+KH REV   I+GMKLSK+K +L+DVL+YK+ VPFT FTGGVGRH Q K                          +PGSK RWPQKA++IVLDL+ NAE+NAEV
Sbjct:   13 KSAKARGSHLRVHFKHCREVTTTIRGMKLSKAKAFLEDVLEYKQIVPFTKFTGGVGRHAQAK-----------------------NMKAPGSKGRWPQKASKIVLDLLTNAEANAEV 106          
BLAST of mRNA_H-elongata_contig64446.14032.1 vs. uniprot
Match: A0A3R7JUX4_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JUX4_9STRA)

HSP 1 Score: 124 bits (311), Expect = 2.090e-33
Identity = 64/117 (54.70%), Postives = 81/117 (69.23%), Query Frame = 0
Query:    8 KSAKARGSNLRVHYKHMREVAHLIKGMKLSKSKQYLQDVLDYKRAVPFTMFTGGVGRHPQGKLPISKDYMGDPSTKTVPGNKHKHTFVSPGSKCRWPQKATRIVLDLVRNAESNAEV 124
            ++AKARGS+LRVH+KH REV+H IKGM L+K+K +LQ V +YK+AVPFT FTGG GRH QGKL                         + G KC+WPQKAT+I+LDL++NAE+NAEV
Sbjct:   13 RAAKARGSHLRVHFKHCREVSHAIKGMPLNKAKSFLQAVTEYKQAVPFTKFTGGCGRHAQGKL-----------------------RGAAGDKCKWPQKATKIILDLLKNAEANAEV 106          
BLAST of mRNA_H-elongata_contig64446.14032.1 vs. uniprot
Match: A0A2D4CDQ7_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CDQ7_PYTIN)

HSP 1 Score: 131 bits (329), Expect = 7.320e-33
Identity = 68/117 (58.12%), Postives = 82/117 (70.09%), Query Frame = 0
Query:    8 KSAKARGSNLRVHYKHMREVAHLIKGMKLSKSKQYLQDVLDYKRAVPFTMFTGGVGRHPQGKLPISKDYMGDPSTKTVPGNKHKHTFVSPGSKCRWPQKATRIVLDLVRNAESNAEV 124
            ++AKARGS+LRVH+KH REV H IKGM LSK+K +LQ VL+YK+AVPFT FTGG GRH QGKL  +                       PG KC+WPQKAT+I+LDLV+NAE+NAEV
Sbjct: 1558 RAAKARGSHLRVHFKHCREVCHAIKGMPLSKAKSFLQAVLEYKQAVPFTKFTGGCGRHAQGKLRNA-----------------------PGDKCKWPQKATKIILDLVKNAEANAEV 1651          
BLAST of mRNA_H-elongata_contig64446.14032.1 vs. uniprot
Match: F0WNJ9_9STRA (60S ribosomal protein L172 putative n=2 Tax=Albugo TaxID=65356 RepID=F0WNJ9_9STRA)

HSP 1 Score: 122 bits (306), Expect = 1.220e-32
Identity = 61/117 (52.14%), Postives = 80/117 (68.38%), Query Frame = 0
Query:    8 KSAKARGSNLRVHYKHMREVAHLIKGMKLSKSKQYLQDVLDYKRAVPFTMFTGGVGRHPQGKLPISKDYMGDPSTKTVPGNKHKHTFVSPGSKCRWPQKATRIVLDLVRNAESNAEV 124
            ++AKARG ++RVH+KH REVAH IK M L K+K++L DVLDYK+AVPFT FTGG GRH QGKL                         + G KC+WPQK+T+++LDL++NAE+NAE+
Sbjct:   13 RAAKARGQHIRVHFKHCREVAHAIKNMNLIKAKRFLSDVLDYKQAVPFTKFTGGCGRHAQGKL-----------------------RGAAGDKCKWPQKSTKVILDLLKNAEANAEM 106          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig64446.14032.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FU31_ECTSI4.190e-7692.68Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6V1UCU8_HETAK9.610e-3757.50Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A5D6XKD7_9STRA3.870e-3658.12Uncharacterized protein n=25 Tax=Oomycota TaxID=47... [more]
W7TUF4_9STRA2.570e-3555.2060s ribosomal protein l17-2 n=2 Tax=Monodopsidacea... [more]
A0A485L8A8_9STRA4.420e-3556.78Aste57867_17649 protein n=4 Tax=Aphanomyces TaxID=... [more]
A0A067CFI1_SAPPC4.910e-3454.2450S ribosomal protein L22 n=4 Tax=Saprolegniaceae ... [more]
A0A7S1TQM1_9STRA1.980e-3357.26Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A3R7JUX4_9STRA2.090e-3354.70Uncharacterized protein n=2 Tax=Phytophthora kerno... [more]
A0A2D4CDQ7_PYTIN7.320e-3358.12Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]
F0WNJ9_9STRA1.220e-3252.1460S ribosomal protein L172 putative n=2 Tax=Albugo... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001063Ribosomal protein L22/L17PFAMPF00237Ribosomal_L22coord: 12..124
e-value: 4.1E-16
score: 59.1
IPR036394Ribosomal protein L22/L17 superfamilyGENE3D3.90.470.10coord: 1..127
e-value: 1.8E-36
score: 127.3
IPR036394Ribosomal protein L22/L17 superfamilySUPERFAMILY54843Ribosomal protein L22coord: 3..124
NoneNo IPR availablePANTHERPTHR11593:SF10RIBOSOMAL PROTEIN L17coord: 3..69
NoneNo IPR availablePANTHERPTHR11593:SF10RIBOSOMAL PROTEIN L17coord: 98..124
IPR005721Ribosomal protein L22/L17, eukaryotic/archaealPANTHERPTHR1159360S RIBOSOMAL PROTEIN L17coord: 98..124
IPR005721Ribosomal protein L22/L17, eukaryotic/archaealPANTHERPTHR1159360S RIBOSOMAL PROTEIN L17coord: 3..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig64446contigH-elongata_contig64446:1405..3311 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig64446.14032.1mRNA_H-elongata_contig64446.14032.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig64446 1405..3311 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig64446.14032.1 ID=prot_H-elongata_contig64446.14032.1|Name=mRNA_H-elongata_contig64446.14032.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=128bp
SKEIESTKSAKARGSNLRVHYKHMREVAHLIKGMKLSKSKQYLQDVLDYK
RAVPFTMFTGGVGRHPQGKLPISKDYMGDPSTKTVPGNKHKHTFVSPGSK
CRWPQKATRIVLDLVRNAESNAEVIKT*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001063Ribosomal_L22
IPR036394Ribosomal_L22/L17_sf
IPR005721Ribosomal_L22/L17_euk/arc