prot_H-elongata_contig64429.14031.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig64429.14031.1
Unique Nameprot_H-elongata_contig64429.14031.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length506
Homology
BLAST of mRNA_H-elongata_contig64429.14031.1 vs. uniprot
Match: D8LHL0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHL0_ECTSI)

HSP 1 Score: 298 bits (762), Expect = 3.320e-85
Identity = 245/632 (38.77%), Postives = 308/632 (48.73%), Query Frame = 0
Query:    1 IQAGPGKIGTELLMEPQHGHVRVELQQAKDKPGKDGNGDGDSCGGSGF--FWMSDEELFLHLMRYVGAADLRILSAFNSYVHL------------VTICRAAAATAVPRSPS---------PVDVAATEGSRRSTIVWRQNDTRPAL-ATVVHAVPRAMAA-------MAGSAG-----GPRGSRRREEEDGDG-----VPSETKVPFSLVNLVVHADQRRAPLRTFHFADAPPTLTL--------------RLDAQPRRVGEGKV----------IGSWEQEKQGL---------ERGRTEKENEKVDSSSTE-------------------RCCATCETLPVIRIDDGGISR-----GASAATRGGGRRDRAGRYAGTKANDGXXXXXXXXEANKQLHTLLQNVLEETYNVPVPWAISKEDLIPPATSFASERQAPASRFANRVRHAGTYPPVAASAGLRTPE--------------APSTLVGPSGALPSGLADGGRWFARTVGDGAILLTFLPAWEAWRAEVAQRASVRRKKRSTVAATDVAAEEARKDERRRV---------------GGEDVDDSSLGLFLFLVRMGNFGLPIEPQTAVLRYVRKILLAHIPISYHREMAFKPAQR 505
             +AG G IGTEL MEPQHGHV VE QQ          G  DS G      FWMSD+ELF +L+RYV AADLRILSAF SY++L            +   R  AATA   S +         P    A  G RR  +  RQ+ +  A  A+ +   PR  ++        +GS       G  GS+R    DG       V SE  VP SL+NLVVHADQRRAPLR FHFADA P+L                ++  +P R G G            +G     K+G+         E+G  E++  K D+                       R CATCE LPV++ID+ G ++     G+ A   GG       R      ++G         AN+Q+H LL+ VLE+T NV VPWAI+  DLIPP+    +   + +S      R  G       +AG  +P               AP TL G SG LPS LA  GRWF+RT+GDGAILLTFLPA + WR EV+ R   RR           A  EARK  + +                GG + +D SLGLFLFLVR G+FGLPIEPQ+A LR +R+ILLAHIP S+H+ MAFKPA+R
Sbjct:  324 FEAGHGIIGTELRMEPQHGHVWVERQQ----------GTKDSAGXXXXXSFWMSDKELFQNLIRYVDAADLRILSAFKSYIYLQHKSEAAARMSPIARARDHAATAAKSSAAAAHNSGWDIPGASRAGPGGRRGGVCSRQSSSGSAGGASGMETYPRRQSSPGRVPQSRSGSGXXXXXFGGXGSKRGGARDGGAGDDADVLSEVAVPVSLINLVVHADQRRAPLRMFHFADALPSLPXXXXXXXAHNTPSPRKIRQRPSRGGPGXXXXGGARDSGEVGQLPTTKEGVVMGRGVGAGEKGAEEQQGRKDDAGRQRETVENDDGGCXXXXXXPAARHCATCEALPVVQIDNNGDNKDGDGAGSPAVGDGGQGXXXXXRGRAGSVHEGDL------SANEQMHGLLEKVLEDTQNVSVPWAITSSDLIPPSIYLVANSSSGSSSGIAASRVGGGRSGGHCNAGPASPPTXXXXXXXXXVPGLAPPTLKGASGPLPSELAMRGRWFSRTIGDGAILLTFLPALDEWRKEVSARLEQRR-----------ALREARKTRKWKKSGRKGPGRGGACAGKGGNEDEDDSLGLFLFLVRSGDFGLPIEPQSAKLRDIRRILLAHIPRSHHQAMAFKPARR 928          
BLAST of mRNA_H-elongata_contig64429.14031.1 vs. uniprot
Match: A0A836C7M7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7M7_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 6.670e-10
Identity = 103/423 (24.35%), Postives = 139/423 (32.86%), Query Frame = 0
Query:    1 IQAGPGKIGTELLMEPQHGHVRVELQQAKDKPGKDGNGDGDSCGGSGFFWMSDEELFLHLMRYVGAADLRILSAFNSYVHLVTICRAAAATAVPRSPSP------VDVAATEGSRRSTIVWRQNDTRPALATVVHAVPRAMAAMAGSAGGPRGSRRREEEDGDGVPSETKVPFSLVNLVVHADQRRAPLRTFHFA-DAPPTLTLRLDAQPRRVGEGKVIGSWEQEKQGLERGRTEKENEKVDSSSTERCCATCETLPVIRIDDGGISRGASA----ATRGGGRRDRAGRYAGTKANDGXXXXXXXXEANKQLHTLLQNVLEETYNVPVPWAISKEDLIPPATSFASERQAPASRFANRVRHAGTYPPVAASAGLRTPEAPSTLVGPSGALPSGLADGGRWFARTVGDGAILLTFLPAWEAWRA 412
              A  G  GTEL MEPQ+G V  +             G GDS       W++D + F  L RYV AADL +LSAFN++  +  +C A                  +D++                                            +R  +    D V     VP S+++L+VHA+    PL+ FHFA  A   LT                     E QG          +          CATC     + + D     GAS     +       DR    +G  AND          AN+QL+ +++  L  T+    PWA S                     F                             G  G+LP      GRWFAR    GA+LLTFLPA++ W A
Sbjct: 1176 FSAPGGVFGTELFMEPQYGFVVADAAAG---------GAGDSAEPR---WINDRDFFELLWRYVHAADLCVLSAFNTFGAVKALCSAXXXXXXXXXXXXXXXXGLLDLSEHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGVDFNSADAV----SVPLSMLHLLVHAEAHEVPLQMFHFACRARGALTAA-------------------EHQGAA--------DSXXXXXXXXXCATCSRHRNVVVSDDAQFFGASLQRAPSAEAAAALDREPAVSGASAND--------MLANRQLYAMVEKALRMTHTAEAPWAFSXXXXXXXXXXXXXXXXXXLPLFP----------------------------GEFGSLPETYVRSGRWFARAADHGALLLTFLPAYDEWSA 1519          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig64429.14031.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHL0_ECTSI3.320e-8538.77Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C7M7_9STRA6.670e-1024.35Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 212..232

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig64429contigH-elongata_contig64429:80..3138 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig64429.14031.1mRNA_H-elongata_contig64429.14031.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig64429 80..3138 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig64429.14031.1 ID=prot_H-elongata_contig64429.14031.1|Name=mRNA_H-elongata_contig64429.14031.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=506bp
IQAGPGKIGTELLMEPQHGHVRVELQQAKDKPGKDGNGDGDSCGGSGFFW
MSDEELFLHLMRYVGAADLRILSAFNSYVHLVTICRAAAATAVPRSPSPV
DVAATEGSRRSTIVWRQNDTRPALATVVHAVPRAMAAMAGSAGGPRGSRR
REEEDGDGVPSETKVPFSLVNLVVHADQRRAPLRTFHFADAPPTLTLRLD
AQPRRVGEGKVIGSWEQEKQGLERGRTEKENEKVDSSSTERCCATCETLP
VIRIDDGGISRGASAATRGGGRRDRAGRYAGTKANDGGGGGEDDDEANKQ
LHTLLQNVLEETYNVPVPWAISKEDLIPPATSFASERQAPASRFANRVRH
AGTYPPVAASAGLRTPEAPSTLVGPSGALPSGLADGGRWFARTVGDGAIL
LTFLPAWEAWRAEVAQRASVRRKKRSTVAATDVAAEEARKDERRRVGGED
VDDSSLGLFLFLVRMGNFGLPIEPQTAVLRYVRKILLAHIPISYHREMAF
KPAQR*
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