prot_H-elongata_contig6440.14028.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig6440.14028.1
Unique Nameprot_H-elongata_contig6440.14028.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length148
Homology
BLAST of mRNA_H-elongata_contig6440.14028.1 vs. uniprot
Match: D8LMG4_ECTSI (Ubiquitin-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMG4_ECTSI)

HSP 1 Score: 140 bits (353), Expect = 7.930e-40
Identity = 87/142 (61.27%), Postives = 100/142 (70.42%), Query Frame = 0
Query:    1 NKEDDGVSLVGSQLPAFRDEPKSGGQGLCLNTNLVKKITVRESGKV-AD-GNLRQVAPVTVVFNLPDGSQLTHRLYFGNLQFQLGQTVEVLKGFVESEIGIPMSRQQELYLGSTLMMDPMSLLDYPEINGTGDVFIAVGGKM 140
            ++EDD V+ VGS       E KS GQGL L+TNLV+    RE   V AD G  RQVA VTVVF+LPDGSQ        + +FQLGQTVEVLK FVESE GIPMS Q ELYLGS LMMDPM+LLDYPE++G G+V I V G+M
Sbjct:   20 DEEDDVVAFVGSPRFTRNAEMKSSGQGLYLDTNLVRGSVSREVQDVHADNGFQRQVAVVTVVFDLPDGSQ-------ADQEFQLGQTVEVLKSFVESEFGIPMSCQ-ELYLGSVLMMDPMTLLDYPEVDGAGNVLIVVEGEM 153          
BLAST of mRNA_H-elongata_contig6440.14028.1 vs. uniprot
Match: F0YBA1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YBA1_AURAN)

HSP 1 Score: 94.7 bits (234), Expect = 7.320e-22
Identity = 64/147 (43.54%), Postives = 83/147 (56.46%), Query Frame = 0
Query:    3 EDDGVSLVGSQLPAFRDEPKS--GGQGLCLNTNLVKKITVRESGKVADGNLRQVAPVTVVFNLPDGSQLTHRLYFGNLQFQLGQTVEVLKGFVESEIGIPMSRQQELYLGSTLMMDPMSLLDYPEINGTGDVFIAVGGKMTIQEGKK 147
            +DD V+ VGS LP+   EPK+  G +GL ++  +  +   R   +         A V VVF LPDGS+       G   F++G TVEVLK FVE E  IPM   Q LYL  TLM+DP+SL DYP I+   D F+ VGG++  Q  KK
Sbjct:   22 DDDYVTAVGSALPSAA-EPKAALGLRGLDISAVVKSERNPRPCAEHERVERALDAQVLVVFELPDGSE-------GEKHFKMGHTVEVLKSFVEEEFEIPMG-VQSLYLDETLMLDPLSLSDYPAIDPARDCFVRVGGEIPEQAQKK 159          
BLAST of mRNA_H-elongata_contig6440.14028.1 vs. uniprot
Match: A0A6V1REP9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1REP9_HETAK)

HSP 1 Score: 86.7 bits (213), Expect = 3.160e-18
Identity = 52/96 (54.17%), Postives = 62/96 (64.58%), Query Frame = 0
Query:   52 RQVAPVTVVFNLPDGSQLTHRLYFGNLQFQLGQTVEVLKGFVESEIGIPMSRQQELYLGSTLMMDPMSLLDYPEINGTGDVFIAVGGKMTIQEGKK 147
            RQ   VTVVF LPDGS         + +F LGQTVE LK +VE E  IPM  QQEL L   ++MDPMSLLDY EIN   +VFI+V G++  +E KK
Sbjct:  123 RQQTTVTVVFELPDGST-------ADKEFMLGQTVEFLKSYVEGEFDIPMG-QQELLLNGKVLMDPMSLLDYSEINPNEEVFISVQGELG-EESKK 209          
BLAST of mRNA_H-elongata_contig6440.14028.1 vs. uniprot
Match: A0A7S2RY85_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RY85_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 2.780e-16
Identity = 46/97 (47.42%), Postives = 61/97 (62.89%), Query Frame = 0
Query:   52 RQVAPVTVVFNLPDGSQLTHRLYFGNLQFQLGQTVEVLKGFVESEIGIPMSRQQELYLGSTL--MMDPMSLLDYPEINGTGDVFIAVGGKMTIQEGK 146
            R   PV VVF+LPDGSQ+ H+       FQ+GQT+EVLK FV SE GIPM  Q +L+L      +MDP++LLDY +I+   +V + V G M +   K
Sbjct:   47 RATEPVIVVFDLPDGSQVEHK-------FQMGQTIEVLKSFVASECGIPMGGQ-DLFLEGLQQPLMDPLTLLDYSQIDPASEVLVRVEGTMHMSAKK 135          
BLAST of mRNA_H-elongata_contig6440.14028.1 vs. uniprot
Match: A0A7S2HLV2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HLV2_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 1.230e-15
Identity = 46/116 (39.66%), Postives = 72/116 (62.07%), Query Frame = 0
Query:   27 GLCLNTNLVKKITVRESGKVADGNL--RQVAPVTVVFNLPDGSQLTHRLYFGNLQFQLGQTVEVLKGFVESEIGIPMSRQQELYLGST--LMMDPMSLLDYPEINGTGDVFIAVGG 138
            GL L+    K+   + S +  +  +  R     T++F LPDGS + +       +FQ+GQTV+VLK ++ SE+GIPM+ QQ LYL ++  +++DPM+LLDYPEI+   ++ I V G
Sbjct:   54 GLGLDLTQAKQPNDQGSDQTREAQIERRNNTVATILFELPDGSMVQN-------EFQMGQTVQVLKSYIASEVGIPMA-QQSLYLETSTDMLLDPMTLLDYPEIDPMDEILIRVEG 161          
BLAST of mRNA_H-elongata_contig6440.14028.1 vs. uniprot
Match: A0A8J2SIH4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SIH4_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 2.030e-15
Identity = 56/144 (38.89%), Postives = 76/144 (52.78%), Query Frame = 0
Query:    4 DDGVSLVGSQLPAFRDEPKSGGQGLCLNTNLVKKITVRESGKVADGNLRQVAPVTVVFNLPDGSQLTHRLYFGNLQFQLGQTVEVLKGFVESEIGIPMSRQQELYLGSTLMMDPMSLLDYPEINGTGDVFIAVGGKMTIQEGKK 147
            DD ++ +  +L +   EPK    G+ +  +L K     E+ +  D   R  APV VVF LPDGS+       G   F+LGQTVEVLK FVE E  I MS  + LYLG   M DP SL D+P ++      + V G++  +  KK
Sbjct:   12 DDLLATISPKLISPGAEPKPRSIGIDM-ASLAKSERNAENTEEDDIIKRLDAPVLVVFELPDGSE-------GEKTFKLGQTVEVLKAFVEDEFEIDMSASR-LYLGDEEMPDPFSLSDFPSVSPRKACVVRVAGEVPERAQKK 146          
BLAST of mRNA_H-elongata_contig6440.14028.1 vs. uniprot
Match: A0A7S2D6F3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D6F3_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 1.440e-14
Identity = 44/96 (45.83%), Postives = 59/96 (61.46%), Query Frame = 0
Query:   51 LRQVAPVTVVFNLPDGSQLTHRLYFGNLQFQLGQTVEVLKGFVESEIGIPMSRQQELYL----GSTLMMDPMSLLDYPEINGTGDVFIAVGGKMTI 142
            +    PV VVF+LPDGS +         +F +GQ+VEVLK ++ SE GI M  QQ L+L    GS L+MDPMSL DYP+I+   +  I V G+M +
Sbjct:   27 MEATTPVLVVFDLPDGSSVES-------EFAIGQSVEVLKSYIASECGIQMGDQQ-LFLEAADGSVLLMDPMSLSDYPQISAGSENIIRVEGEMEM 114          
BLAST of mRNA_H-elongata_contig6440.14028.1 vs. uniprot
Match: A0A482RPU6_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RPU6_9ARCH)

HSP 1 Score: 74.3 bits (181), Expect = 4.140e-14
Identity = 48/105 (45.71%), Postives = 65/105 (61.90%), Query Frame = 0
Query:   26 QGLCLNTNLVKKITVRESGKVADGNLRQVAPVTVVFNLPDGSQLTHRLYFGNLQFQLGQTVEVLKGFVESEIGIPMSRQQELYLGST--LMMDPMSLLDYPEING 128
            +G+ LN  L  +   R +  VA     Q   + VVF+LPDGSQ       G   F+LGQ+VEVLK FVESE GIPM+ Q+ ++L S+   M++P+SLLDY E+ G
Sbjct:   50 RGMSLNLTLAAEAKARLNDPVAV----QEEFINVVFDLPDGSQ-------GEGNFKLGQSVEVLKSFVESEYGIPMATQR-MFLNSSEKQMLNPLSLLDYAEVKG 142          
BLAST of mRNA_H-elongata_contig6440.14028.1 vs. uniprot
Match: A0A8K1CTH2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTH2_PYTOL)

HSP 1 Score: 52.0 bits (123), Expect = 1.090e-5
Identity = 37/112 (33.04%), Postives = 54/112 (48.21%), Query Frame = 0
Query:   25 GQGLCLNTNLVKKITVRESGKVADGNLRQVAPVTVVFNLPDGSQLTHRLYFGNLQFQLGQTVEVLKGFVESEIGIPMSRQQELYLGSTLMMDPMSLLDYPEINGTGDVFIAV 136
            G  L L     ++    E  K+ D    Q   + V F LPD S +T         F+ GQTV+VLK ++E E+ I  S  Q L+L   LM+DP+SL D+  +     + + V
Sbjct:   10 GLSLALAHEDHREEAQEEESKLDDIIALQEEQIKVKFVLPDDSTITQA-------FKKGQTVQVLKCYLEEELEIQQSTAQ-LFLNDRLMLDPLSLTDFKGVENARTIEVHV 113          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6440.14028.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LMG4_ECTSI7.930e-4061.27Ubiquitin-like domain-containing protein n=1 Tax=E... [more]
F0YBA1_AURAN7.320e-2243.54Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A6V1REP9_HETAK3.160e-1854.17Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2RY85_9STRA2.780e-1647.42Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2HLV2_9STRA1.230e-1539.66Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A8J2SIH4_9STRA2.030e-1538.89Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2D6F3_9STRA1.440e-1445.83Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A482RPU6_9ARCH4.140e-1445.71Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A8K1CTH2_PYTOL1.090e-533.04Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 52..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6440contigH-elongata_contig6440:4111..5658 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6440.14028.1mRNA_H-elongata_contig6440.14028.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig6440 4111..5658 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig6440.14028.1 ID=prot_H-elongata_contig6440.14028.1|Name=mRNA_H-elongata_contig6440.14028.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=148bp
NKEDDGVSLVGSQLPAFRDEPKSGGQGLCLNTNLVKKITVRESGKVADGN
LRQVAPVTVVFNLPDGSQLTHRLYFGNLQFQLGQTVEVLKGFVESEIGIP
MSRQQELYLGSTLMMDPMSLLDYPEINGTGDVFIAVGGKMTIQEGKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029071Ubiquitin-like_domsf