prot_H-elongata_contig64310.14021.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig64310.14021.1
Unique Nameprot_H-elongata_contig64310.14021.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length161
Homology
BLAST of mRNA_H-elongata_contig64310.14021.1 vs. uniprot
Match: D7FRV9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV9_ECTSI)

HSP 1 Score: 201 bits (512), Expect = 4.130e-60
Identity = 95/158 (60.13%), Postives = 117/158 (74.05%), Query Frame = 0
Query:    4 KEWDHVTIVTAAWKNATINPTFTALEVMESTGMLGPNVRLFRNRSLLTDVRAMLCADGLAFSRSSLSLMIFPHTRARFFFVPAVCGNGLFRIMKKSP-KAFVDNTTLLFLEKPDAEIHGIRWREDAPEYTVFNKWRDDPEQLLEIVEYGGIETLERCS 160
            K+WD+VT +TAAW    INPTF+ LEVM   G LG NVRL +NRSLL DVR MLCAD LA SRSS+S + F H+RA  FFVP  CGNG FR M++ P KA  DNTTLL LEKPDAE++G  W  ++P+Y+V+  W D PEQLLE+  +GGIE +++CS
Sbjct:  290 KDWDNVTFLTAAWNQKAINPTFSILEVMAKAGTLGDNVRLLKNRSLLEDVREMLCADALATSRSSMSFLTFAHSRATTFFVPTPCGNGGFRRMRRPPVKATFDNTTLLLLEKPDAEVYGTAWPGNSPKYSVYQAWHDTPEQLLEMATFGGIEGVQKCS 447          
BLAST of mRNA_H-elongata_contig64310.14021.1 vs. uniprot
Match: D7FRV8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV8_ECTSI)

HSP 1 Score: 191 bits (484), Expect = 3.260e-57
Identity = 88/161 (54.66%), Postives = 117/161 (72.67%), Query Frame = 0
Query:    1 MKAKEWDHVTIVTAAWKNATINPTFTALEVMESTGMLGPNVRLFRNRSLLTDVRAMLCADGLAFSRSSLSLMIFPHTRARFFFVPAVCGNGLFRIMKKSP-KAFVDNTTLLFLEKPDAEIHGIRWREDAPEYTVFNKWRDDPEQLLEIVEYGGIETLERCS 160
            + AK+WD+VT +TAAW++  +NPTF  LE+M   G+LG NV LF NR+LLTD++ MLCAD LA SRSS+S + F H+RA  FFVP  CGNG FR MK  P KA  DNTTLL LEK ++E+ G+ WR++  +Y+V+  W D P QLLE+  Y GI+ L++C+
Sbjct:  151 LAAKDWDNVTFLTAAWEDRALNPTFLTLEMMADAGVLGENVHLFNNRTLLTDMKEMLCADALATSRSSMSFLTFAHSRATTFFVPTPCGNGGFRRMKDVPVKATFDNTTLLLLEKRESEVFGVDWRQNGSDYSVYKNWLDSPHQLLEMTTYKGIKGLQKCT 311          
BLAST of mRNA_H-elongata_contig64310.14021.1 vs. uniprot
Match: A0A6H5JNM4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNM4_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 3.570e-23
Identity = 53/157 (33.76%), Postives = 97/157 (61.78%), Query Frame = 0
Query:    3 AKEWDHVTIVTAAWKNATINPTFTALEVMESTGMLGPNVRLFRNRSLLTDVRAMLCADGLAFSRSSLSLMIFPHTRARFFFVPAVCGNGLFRIMKKSPKAFVDNTTLLFLEKPDAEIHGIRWREDAPEYTVFNKWRDDPEQLLEIVEYGGIETLERC 159
            +K+WD+++++T+   +  +NPT++ +  +   G LG NV + ++RS   D++AMLCAD LA S S+LS ++  H+RA+ FF+P  C    + +       FV N +++ L++P  E++GI WR  +  YTV++ W D    ++E+V    ++ ++RC
Sbjct:  283 SKKWDYLSVLTSG-PDKQLNPTYSVIAELNRQGFLGTNVEMHKDRSFWEDLQAMLCADSLALSHSTLSNLLLAHSRAKRFFLPWGCEPQPWTLKLNR---FV-NASMICLQRP--EVYGIDWRTTSDAYTVYDSW-DPNSNMMEMVVSDAVKGVQRC 431          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig64310.14021.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FRV9_ECTSI4.130e-6060.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FRV8_ECTSI3.260e-5754.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JNM4_9PHAE3.570e-2333.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig64310contigH-elongata_contig64310:840..3140 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig64310.14021.1mRNA_H-elongata_contig64310.14021.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig64310 840..3170 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig64310.14021.1 ID=prot_H-elongata_contig64310.14021.1|Name=mRNA_H-elongata_contig64310.14021.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=161bp
MKAKEWDHVTIVTAAWKNATINPTFTALEVMESTGMLGPNVRLFRNRSLL
TDVRAMLCADGLAFSRSSLSLMIFPHTRARFFFVPAVCGNGLFRIMKKSP
KAFVDNTTLLFLEKPDAEIHGIRWREDAPEYTVFNKWRDDPEQLLEIVEY
GGIETLERCS*
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