mRNA_H-elongata_contig11815.1402.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig11815.1402.1 vs. uniprot
Match: D8LIG7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIG7_ECTSI) HSP 1 Score: 425 bits (1092), Expect = 5.760e-137 Identity = 273/513 (53.22%), Postives = 311/513 (60.62%), Query Frame = 1
Query: 1 MAGVAGSEDEDFLDSYYDVVVLSTGLGSSILAAALAKSGKRVLHLDRNDYYGDQTASFSFLKLLDWVE-----RHRWRGGE----GMPAEPSTDPN---YDLGSVGKAIARAHVREEINQKEKTKNRTAPAAMGAEGVPESDGERRDEVVEEGTKNATGKSADTCGSIAADRVDDDKGKQEMESIPQSSREKENDDVGADRTNDVEENADK----------RYRSLELRLLPLFHHGCRTRAGAPSDACSQERLEQKAAEDAAAAATAASGRYV--RPVAPSHPAWIGRRAPRKVSKGGEISGKRLEDEELHPAFWGYRVEQRPDPAELVRLSRSFNLDLTSKVVLATGAAVDALVSSGVASYLEFKDMPAVPCSKADVFGTKLLTPLEKRRLMRFLLFASDWGLQRAGEDVTARNEAGLGRGRSLRRPQNREVASGDFDAGAHAGRPFREFLKSCGLPERVRAMVTHALALLPGGEGVVGGEDAGTREGNSVPSGLDENDATTEEGLEAVCR 1467
M G AG D D+L+ YYD +VLSTGLGSSILAAALAK+GK VL+LD ++YYG +ASFSF +LLDW E H +GG G ST+ D AIARAH R E+ K R A G E + + R D G ++ EE A R ++L L LLPL +HGCRTRAGAPSDAC ER +K AEDAAAA SGR++ R PSHPAW GRR P GG + G E+E +HP+FWGYR E+RP A+LVRLSRSFNLDLTS+V+LATG AVDALV+SGVASYLEFKDM +ADVFGTKLLTPLEKRRLM+FLLFASDWGLQR GEDV +RNEAGLGRGRSLRRPQNRE ASGDFDA AHAG+PF FL+ CGLPERVRAM+THALALLPGG+ GGE G ATTEEGLEAV R
Sbjct: 1 MNGAAGDVD-DYLEDYYDAIVLSTGLGSSILAAALAKAGKSVLYLDCHEYYGQDSASFSFTQLLDWAEANGRKHHGGKGGVAGDGGQTCAISTNQAAKMVDSADAWTAIARAHARNELK-----KEREMKATAGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQTEQQR-----DGGEEKEPTAEEAAXXXXXXXXAAAARLQTLNLHLLPLSYHGCRTRAGAPSDACVPERERRKVAEDAAAA----SGRFLGGRQPQPSHPAWAGRRDPTMRGDGGAVGG---EEEGVHPSFWGYRTERRPGAADLVRLSRSFNLDLTSQVLLATGPAVDALVNSGVASYLEFKDM------QADVFGTKLLTPLEKRRLMKFLLFASDWGLQRRGEDVLSRNEAGLGRGRSLRRPQNREAASGDFDAEAHAGKPFSGFLRGCGLPERVRAMITHALALLPGGD--EGGEGGG---------------ATTEEGLEAVYR 472
BLAST of mRNA_H-elongata_contig11815.1402.1 vs. uniprot
Match: A0A7S3YJR1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YJR1_HETAK) HSP 1 Score: 123 bits (309), Expect = 1.980e-29 Identity = 72/167 (43.11%), Postives = 97/167 (58.08%), Query Frame = 1
Query: 925 SRSFNLDLTSKVVLATGAAVDALVSSGVASYLEFKDMPA------------------VPCSKADVFGTKLLTPLEKRRLMRFLLFASDWGLQRAGEDVTARNEAGLGRGRSLRRPQNREVAS-----GDFDAGAH--AGRPFREFLKSCGLPERVRAMVTHALALLP 1350
SR F+LDL+ ++ L G AVD +V SG+ Y+EFK + VPC K DV +K+L+ +EKR LMRFL + +WG + GEDVT +NE LG+GR + RPQN+E A+ DAG AGRPF EFL +C L R++ +V +AL L P
Sbjct: 1 SRRFSLDLSPRLTLGAGLAVDTMVRSGIGRYMEFKSIDGLFLCKEEGDASSEETFSRVPCLKGDVVKSKMLSVVEKRLLMRFLQYCMEWGQVQQGEDVTTQNERELGQGRMITRPQNKEQATKARGAAALDAGPFLAAGRPFAEFLAACKLTPRLQRLVLYALVLAP 167
BLAST of mRNA_H-elongata_contig11815.1402.1 vs. uniprot
Match: W7U8Q6_9STRA (Rab proteins geranylgeranyltransferase component a 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U8Q6_9STRA) HSP 1 Score: 114 bits (286), Expect = 2.410e-23 Identity = 86/235 (36.60%), Postives = 116/235 (49.36%), Query Frame = 1
Query: 901 DPAELVRLSRSFNLDLTSKVVLATGAAVDALVSSGVASYLEFKDMPA----------------------------------------------VPCSKADVFGTKLLTPLEKRRLMRFLLFASDWGLQ-RAGEDVTARNEAGLGRGRSLRRPQNREVASGDFDAGAHAGRPFREFLKSCGLPERVRAMVTHALALLPG-GEGVVGGEDAGTREGNSVPSGLDENDATTEEGLEAV 1461
D L+ SR FNLDL+ V++A G + L+SSGVASYLEF+ + A VPCSK DVF + LL EKR+LM+FL +DWG + ++G+ RNE LG+ RSL+RPQN+ S + + A+ RP R+FL+ + E ++ +V HALALL G GEG G D G R+ TTEEGL +
Sbjct: 210 DAESLIARSRDFNLDLSPVVLMAGGDMIAPLLSSGVASYLEFRPLYALFIASPSASAIRPSWKGTHQSEASESASTGENSSGPGVSRSVAFHPVPCSKPDVFSSHLLPAKEKRQLMKFLQAVADWGFRAQSGKSAQHRNEVELGQARSLQRPQNK--VSVELETDAYLQRPLRDFLEHSKMDEHLQWVVWHALALLLGPGEGGREGGDEGERQ------------VTTEEGLRRI 430
BLAST of mRNA_H-elongata_contig11815.1402.1 vs. uniprot
Match: A0A1E1XQB3_9ACAR (Putative gdp dissociation inhibitor n=2 Tax=Amblyomma TaxID=6942 RepID=A0A1E1XQB3_9ACAR) HSP 1 Score: 113 bits (283), Expect = 5.240e-23 Identity = 135/469 (28.78%), Postives = 205/469 (43.71%), Query Frame = 1
Query: 31 DFLDSYYDVVVLSTGLGSSILAAALAKSGKRVLHLDRNDYYGDQTASFSFLKLLDW-VERHRWRGGEGMPAEPSTDPNYDLGSVGKAIARAH-----VREEINQKEKTKNRTAPAAMGA--EGVPESDGERRDEVVEEGTKNATGKSADTCGSIAADRVDDDKGKQEMESIPQSSREKENDDVGADRTNDVEENADKRYRSLELRLLPLFHHGCRTRAGAPSDACSQE---RLEQKAAEDAAAAATAASGRYVRPVAPSHPAWIGRRAPRKVSK------GGEISGKRLEDEELHPAFWGYRVEQRPDPAELVRLSRSFNLDLTSKVVLATGAAVDALVSSGVASYLEFK-----------DMPAVPCSKADVFGTKLLTPLEKRRLMRFLLFASDWGLQRAGEDVTARNEAGLGRGRSLRRPQNREVASGDFDAGAHAGRPFREFLKSCGLPERVRAMVTHALALLPG 1353
D L + +DV+V+ TG+ SI+AAA+A+ G+RVLHLD+ +YG AS++F L +W + +H P+EPS G A++H V+E IN EK + P+ A + + + + VEE ++ + +SA D+V A+ + +A S+ L L HG G P+ A S E A+E A ++ A G A H + ++ + GG +SG EE P +V+++ +LV LSR FNLDL K++ + G V+ L+SS +A Y EFK + VPCS+ADVF +K +T +EKR LM+FL F ++ Q+ E G F+ GRPF EFL+S L + V V HA+A++ G
Sbjct: 2 DDLPADHDVIVIGTGMPESIVAAAVARIGQRVLHLDKEAHYGSLWASYNFSSLREWMIAQH-----VPAPSEPSAQVPLGPGERLMVTAQSHSAVTNVQEIINVPEKLPDSPLPSPEPALVQQLQTASADEVSRAVEEPARSVSTESA-------------------------------TDEVVANCPCPL--SAGSTEHSIGTAELSL--HGS---DGPPTAAGSDEVSGAYHTVASEGAGSSVDATYGS-----ATQHTEGVSDGVIEELHEQPAGPSGGNMSGS---PEEKEPV----KVKEQWSLEKLVNLSRKFNLDLAPKLLFSRGPLVELLISSNIARYAEFKALTRILTLHNGGLQQVPCSRADVFTSKNVTVVEKRMLMKFLTFCKEF-------------------------EQHAEEYRG-FE-----GRPFLEFLQSKQLSKNVEHYVLHAIAMVDG 384
BLAST of mRNA_H-elongata_contig11815.1402.1 vs. uniprot
Match: UPI001455834C (rab proteins geranylgeranyltransferase component A 2-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI001455834C) HSP 1 Score: 109 bits (272), Expect = 1.310e-21 Identity = 120/469 (25.59%), Postives = 193/469 (41.15%), Query Frame = 1
Query: 37 LDSYYDVVVLSTGLGSSILAAALAKSGKRVLHLDRNDYYGDQTASFSFLKLLDWVERHRWRGGEGMPAEPSTDPN---------------------YDLGSVGKAIARAHVREEINQKEKTKNRTAPAAMGAEGVPESDGERRDEVVEEGTKNATGKSADTCGSIAADRVDDDKGKQEMESIPQSSREKENDDVGADRTNDVEENADKRYRSLELRLLPLFHHGCRTRAGAPSDACSQERLEQKAAEDAAAAATAASGRYVRPVAPSHPAWIGRRAPRKVSKGGEISGKRLEDEELHPAFWGYRVEQRPDPAELVRLSRSFNLDLTSKVVLATGAAVDALVSSGVASYLEFK-----------DMPAVPCSKADVFGTKLLTPLEKRRLMRFLLFASDWGLQRAGEDVTARNEAGLGRGRSLRRPQNREVASGDFDAGAHAGRPFREFLKSCGLPERVRAMVTHALALL 1347
L + YD +VL TGL SILAAALA+ G RVLHLDRNDYY A+F LLDW++R++ A S D D+ +V +VR+ + + P + + VPE+ G + ++ + + D + ++ ++ ++ + P AD++ E A L+P P Q + + + +AA+ A + G A P +G+ A G+ SG + E+ R E A++ ++ R FN+DL K++ G+ V+ LV+S ++ Y EFK + VPCS+ADVF +K ++ LEKR LMR + F+ ++ +D E + RE RPF EFLKS L ++ V H++A++
Sbjct: 6 LPTEYDEIVLGTGLQESILAAALARIGHRVLHLDRNDYYSGSWATFHLRSLLDWIDRNKALQESDGTANSSNDQTTTSESDVSSQLREGECFLDLPQDVRTVTDLDVTCYVRDGVELPSLERVIVPPRVLDEDQVPEAQGAEGQNAPQIAPESPSTSNQDELQAEGGEQAATNQNQESSQVTP------------ADQSGSAEGAAGG--------LVP------------PGQDEGQSAEQGQRSNEAASGAVSGQG-----AAEQEPGSLGQEAE------GQGSGDQRSPAEVQRVAASNRTEWTW--AKIDQMWRKFNIDLAPKLMFCRGSMVELLVTSRISRYAEFKAVSRILTVIDDKLEQVPCSRADVFSSKYVSVLEKRMLMRVIEFSMNY------QDRLDEYE------------EYRE-------------RPFEEFLKSRKLTPTLQHFVMHSIAMV 398
BLAST of mRNA_H-elongata_contig11815.1402.1 vs. uniprot
Match: UPI0006B1096A (rab proteins geranylgeranyltransferase component A 2-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B1096A) HSP 1 Score: 108 bits (269), Expect = 3.090e-21 Identity = 134/482 (27.80%), Postives = 198/482 (41.08%), Query Frame = 1
Query: 28 EDFLDSYYDVVVLSTGLGSSILAAALAKSGKRVLHLDRNDYYGDQTASFSFLKLLDWVERHRWRGGEGMPAEPSTDPNYDLGSVGKAIARAHVREEINQKEKTKNRTA-----PAAMGAEGVPES-----DGERRDEVVEEGTKNA--------TGKSADTCGSIAADRVDDDKGKQEMESIPQSSREKENDDV-----GADRTNDV---EENADKRYRSLELRLLPLFHHGCRTRAGAPSDACSQERLEQKAAEDAAAAATAASGRYVRPVAPSHPAWIGRRAPRKVSKGGEISGKRLEDEELHPAFWGYRVEQRPDPAE-----LVRLSRSFNLDLTSKVVLATGAAVDALVSSGVASYLEFK-----------DMPAVPCSKADVFGTKLLTPLEKRRLMRFLLFASDWGLQRAGEDVTARNEAGLGRGRSLRRPQNREVASGDFDAGAHAGRPFREFLKSCGLPERVRAMVTHALALL 1347
+D L S +DV++L TG+ SILAAA A+ GK VLHLDRN YYG A+F+F +L +W E+H+ +P +T D + + + Q K + + A+ VPE D + V+ G +N+ S D+ ++V + G+ E+ I + +E E+ V RTNDV E N D TR D S + L Q E + T++ ++ V + R + E S + D L P+ +PD E L R FNLDL K++L+ G V L+SS +A Y EFK + VPCS+ADVF TK ++ +EKR LM+ L F + Q+ E+ F+ GRPF EFLKS L V + +A+A++
Sbjct: 2 DDDLPSNFDVIILGTGMPESILAAAAARIGKTVLHLDRNHYYGGSWANFNFDQLTEWTEKHKV-----IPPHETTTSLIDE-RWAECLTEEETAVPLPQYPKNIQNVSCITCIRESASAKSVPEEKVFSQDDLEKTNVIPSGNENSENTEISHLAASSGDSFSPTDNEQVAEAVGETELSGITHNLQESESSRVTFLGASTSRTNDVSNQEGNGDHV-----------------TREHQEEDTISPD-LGQSLEEALFGSNTSSDNTLIQNVGEREDSVNDVLEDRNHNIRSEESAEMCHDLNLEPS--------KPDKKEWTLEDLHTQRRKFNLDLAPKLLLSKGPLVGLLISSNIARYAEFKCATRVLTYINNHLEQVPCSRADVFATKHVSVVEKRMLMKLLTFCLQF--QKHPEEYRG------------------------FE-----GRPFVEFLKSRKLTPSVVHYICYAIAMV 420
BLAST of mRNA_H-elongata_contig11815.1402.1 vs. uniprot
Match: UPI001403FA90 (rab proteins geranylgeranyltransferase component A 1 n=1 Tax=Amblyraja radiata TaxID=386614 RepID=UPI001403FA90) HSP 1 Score: 105 bits (262), Expect = 2.250e-20 Identity = 105/386 (27.20%), Postives = 164/386 (42.49%), Query Frame = 1
Query: 31 DFLDSYYDVVVLSTGLGSSILAAALAKSGKRVLHLDRNDYYGDQTASFSFLKLLDWVERHRWRGGEGMPAEPSTDPNYDLGSVGKAIARAHVREEINQKEKTKNRTAPAAMGAEGVPESDGERRDEVVEEGTKNATGKSADTCGSIAADRVDDDKGKQEMESIPQSSREKENDDVGADRTNDVEENA------DKRYRSLELRLLPLFHHGCRTRAGAPSDACSQERLEQKAAEDAAAAATAASGRYVRPVAPSHPAWIGRRAPRKVSKGGEISGKRLEDEELHPAFWGYRVEQRPDPAELVRLSRSFNLDLTSKVVLATGAAVDALVSSGVASYLEFKDM-----------PAVPCSKADVFGTKLLTPLEKRRLMRFLLFASDW 1137
D L + DVVVL TGL +I+AAA ++ GK+VLH+DRN+YYG ASFSF LL W+E R + + N + K I +++Q EKT A + E D VVEEG + D+ +IA + K + + ND EEN D + ++ + + PS S+ + ++ AA A S + + + ++S + + + + +++++ R FN+DLTSK + A G+ VD L+ S V+ Y EFK++ VPCS+ADVF +K L+ +EKR LM+FL F ++
Sbjct: 8 DSLPAELDVVVLGTGLQEAIIAAAYSRIGKKVLHVDRNNYYGGDWASFSFSGLLSWIEECRGQ----------STSNAGVNWKDK-ILEGEDAIQLDQIEKTIENVEVFCF-ASTITEED------VVEEGALENKQSNVDSDSAIANGALTSQDEKDQTSKV----------------MNDEEENPENIKDPDSLLSTKDVSTEIIQPEDIPSSTDVPSPTTSETSVAKELI-----AADADSSKI---------------KTNNIEQAPDVSSQEVTKQTKKMTY-----------SQIIKNGRKFNIDLTSKFLYARGSLVDLLIKSNVSRYAEFKNINRILAVQEGKVQQVPCSRADVFASKRLSMIEKRMLMKFLTFCLEY 328
BLAST of mRNA_H-elongata_contig11815.1402.1 vs. uniprot
Match: B5Y4L4_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y4L4_PHATC) HSP 1 Score: 104 bits (260), Expect = 3.740e-20 Identity = 134/472 (28.39%), Postives = 188/472 (39.83%), Query Frame = 1
Query: 25 DEDFLDSYYDVVVLSTGLGSSILAAALAKSGKRVLHLDRNDYYGDQTASFSFLKLLDWVERHRWRGGE--GMPAEPSTDPNYDLGSVGKAIARAHVREEINQKEKTKNRTAPAAMGAEGVPESDGERRDEVVEEGTKNATGKSADTCGSIAADRVDDDKGKQEMESIPQSSREKENDDVGADRTNDVEENADKRYRSLELRLLPLFHHGCRTRAGAPSDACSQERLEQKAAEDAAAAATAASGRYVRPVAPSHPAWIGRRAPRKVSKGGEISGKRLEDEELHPAFWGYRVEQRPDPAELVRLSRSFNLDLTSKVVLATGAAVDALVSSGVASYLEFKDMPA-------------VPCSKADVFGTKLLTPLEKRRLMRFLLFASDWGLQRA----------GEDVTARNEAGLGRGRSLRRPQNREVASGDFDA---GAHAGRPFREFLKSCG-LPERVRAMVTHALALLPG 1353
DE+ L YD ++ TGL SILA+ALA+ GK VLH D +DYYG+ A ++ L +++ +G E G TD + + K ++ +I+ E+ R D VE+GT T T SI+ R L L LL PS S + Q AA AA +Y++ K G +S +++R L SR F +D T ++ A+GA+V+ L+ SGVA YLEFK + VPCSK DVF +KLL+P++KRRLM+FL A D+G A + V + NE L +GRSL RPQN+ V + D A A F E+L+S L ++ +V HALAL G
Sbjct: 24 DEEGLLLEYDAIICGTGLTQSILASALARHGKSVLHCDTSDYYGELDAVWT----LPYLQEKLGKGHELKGKMVTVRTDDSTCIPLSPKGGLQSF---QIHSLER---------------------RNDFTVEQGTAVVTPYGNGTIISISP-------------------------------------------RGLFLDLLVSLDTWKLANGKNPSVHIS---IPQSAASTGAA-----FQKYLK------------------EKLGIVS-----------------IDERDAHLILDERSRGFAVDATPGLLYASGASVEGLLKSGVADYLEFKSLEGLLWLENSDSCLEPVPCSKNDVFASKLLSPMDKRRLMKFLQLALDYGTAHALAEEEASAENNKQVLSLNERYLNQGRSLARPQNKAVLADDIRALQEFIQADMKFHEYLESKQRLSPKLCRIVRHALALESG 381
BLAST of mRNA_H-elongata_contig11815.1402.1 vs. uniprot
Match: UPI00138F9F79 (rab proteins geranylgeranyltransferase component A 1 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138F9F79) HSP 1 Score: 103 bits (257), Expect = 1.200e-19 Identity = 130/489 (26.58%), Postives = 203/489 (41.51%), Query Frame = 1
Query: 28 EDFLDSYYDVVVLSTGLGSSILAAALAKSGKRVLHLDRNDYYGDQTASFSFLKLLDWVERHR--WRGGEGMPAEPSTDPNYDLGSVGKAIARAHVREEINQKEKTKNRTAPAAMGAEGVPESDGERRDEVVEEGTKNATGKSADTCGSIAADRVDDDKGKQEMESIPQSSREKENDDVGADRTNDVEENADKRYRSLELRLLPLFHHGCRTRAGAPSDACSQERL-EQKAAEDAAAAATAASGRYVRPVAP---------SHPAWIGRRAPRKVSKGGEISGKRLEDE-------ELHP-----------AFWGYRVEQRPDPA--------ELVRLSRSFNLDLTSKVVLATGAAVDALVSSGVASYLEFK-----------DMPAVPCSKADVFGTKLLTPLEKRRLMRFLLFASDWGLQRAGEDVTARNEAGLGRGRSLRRPQNREVASGDFDAGAHAGRPFREFLKSCGLPERVRAMVTHALALL 1347
EDF + YD +VL TGL +++AAAL++ G +VLHLDRNDYY Q ASF+F LL W++R++ + P T+ + K A N K K+ RT P D ++ D + E K AT K D++ D++ QE E+ KE D+ V +N + ++ L ++ + A + C E + E+ D + +G V P S P+ V + + R++ + E P +F R ++R PA +L R FN+DL K++L+ GA V++L+S+ ++ Y EFK M AVPCS++DVF +KL+ +EKR LM+FL F D N + + +PF EFLKS + ++ V HA+A++
Sbjct: 2 EDF-PTEYDAIVLGTGLPEAVVAAALSRIGLKVLHLDRNDYYSSQWASFTFDGLLKWIQRNQEILEDDDSGPVTVVTEDEIQYFLIPKTAKAAQ-----NIKVKSYFRTEKKQN-----PVQDKKQTDPITLE--KEATEK----------DKIGDERTDQENET-----GNKEITDIAPC----VRDNVTAAFPAMHGSLAQNENNEITGESAAETTFCLHENVSEESTIVDDSTQIEQGAGNNVSVTQPGSQIDEAETSSPSVGDGEGQSHVEGSFDTNFSRIDSQPSQGIGSEQPPTSGQTPPPSQASFPISRPQRRAKPAVNSDMTYSDLEPYHRQFNIDLAPKLLLSRGALVESLISANISHYAEFKAVNQILTFLEGSMEAVPCSRSDVFSSKLIPVIEKRLLMKFLTFCLD---------------------------HNEHLE----EYKPFEDKPFVEFLKSRRMTPNLQHFVIHAIAMV 427
BLAST of mRNA_H-elongata_contig11815.1402.1 vs. uniprot
Match: A0A2B4S0H1_STYPI (Rab proteins geranylgeranyltransferase component A 1 n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4S0H1_STYPI) HSP 1 Score: 102 bits (255), Expect = 1.710e-19 Identity = 120/477 (25.16%), Postives = 199/477 (41.72%), Query Frame = 1
Query: 28 EDFLDSYYDVVVLSTGLGSSILAAALAKSGKRVLHLDRNDYYGDQTASFSFLKLLDWVERHRWRG-GEGMPAEPSTD---PNYDLG-------SVGKAIARAHVREEINQKEKTKNRTAPAAMGAEGVPESDGERRDEVVEEGTKNATGKSADTCGSIAADRVDDDKGKQEMESIPQSSREKENDDVGA---DRTNDVEENADKRYRSLELRL--LPLFHHGCRTRAG-------APSDACSQERLEQKAAEDAAAAATAASGRYVRPVAPSHPAWIGRRAPRKVSKGGEISGKRLED---EELHPAFWGYRVEQRPDPAELVRLSRSFNLDLTSKVVLATGAAVDALVSSGVASYLEFK-----------DMPAVPCSKADVFGTKLLTPLEKRRLMRFLLFASDWGLQRAGEDVTARNEAGLGRGRSLRRPQNREVASGDFDAGAHAGRPFREFLKSCGLPERVRAMVTHALALL 1347
ED L +DV+VL TG S++AA+L++ G +VLHLDRNDYY Q A+F+F LL W+E ++ G G + D P+ + G S I+ VR ++K KT+ + V G+K DT IAA + K + E P S E + V + +N+ E+ D+ RL + C ++ G + ++ ++ ++ E+ A + G+ V V+P + +G E D ++L P +W R FN+D++ K++ + G V+AL+S+ ++ Y EFK + VPCS+ADVF + ++ +EKR LM+FL F D+ Q+ + A+ +PF EFL+S L ++ + HA+A++
Sbjct: 3 EDKLPEEFDVIVLGTGFPESVVAASLSRVGLKVLHLDRNDYYSGQWATFTFDNLLKWIELNQGENHGSGSDKSGTHDNEPPSLESGTFSVPVPSHSDTISNVMVRSYFSEK-KTEQ---------------------DFVLSGSKE------DTTLEIAASSTEAQKSDETKEVKPDPSGENNSSKVTTGVEESSNEAEDFRDRPANDSNERLDTSDINSTTCSSQLGESNGTPHSEEESSDKDLKDENHDEELPAVTDSRDGQDVSFVSP-------------LRQGREKKPAICPDMTYDDLKP-YW-----------------RRFNIDVSPKLLFSRGPLVEALISANISHYAEFKTVTRILTYMNGQVEEVPCSRADVFSSSAISVVEKRMLMKFLTFCLDFKQQQEQYE-------------------------------AYENKPFGEFLQSRRLTPNLQHFIIHAIAMV 389 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11815.1402.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig11815.1402.1 >prot_H-elongata_contig11815.1402.1 ID=prot_H-elongata_contig11815.1402.1|Name=mRNA_H-elongata_contig11815.1402.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=490bp MAGVAGSEDEDFLDSYYDVVVLSTGLGSSILAAALAKSGKRVLHLDRNDYback to top mRNA from alignment at H-elongata_contig11815:3584..8561+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig11815.1402.1 ID=mRNA_H-elongata_contig11815.1402.1|Name=mRNA_H-elongata_contig11815.1402.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4978bp|location=Sequence derived from alignment at H-elongata_contig11815:3584..8561+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig11815:3584..8561+ >mRNA_H-elongata_contig11815.1402.1 ID=mRNA_H-elongata_contig11815.1402.1|Name=mRNA_H-elongata_contig11815.1402.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2940bp|location=Sequence derived from alignment at H-elongata_contig11815:3584..8561+ (Himanthalia elongata Himel1 dioecious)back to top |