prot_H-elongata_contig6429.14017.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig6429.14017.1 vs. uniprot
Match: A0A6H5JIS9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIS9_9PHAE) HSP 1 Score: 125 bits (313), Expect = 3.870e-33 Identity = 61/140 (43.57%), Postives = 90/140 (64.29%), Query Frame = 0
Query: 1 MDFFQTVAPTSAAASVNIVLAVTNELGYPVNHLDTAQAVMQAELDCTVYMKLPGGFSSLSGNIVRLEKALYGRRQSGLLWNSLLVKTFVMRHGMEQCKTDPCMFRKFRDGKVVLILVVHVDDMTVAGTENEVSELHPVLN 140
+DFF + +P ++AS+ ++LAV NE G +NH D QA A LD V++++P G+ S IV+ E+A+YG +QSG W T V +G EQCK DPC+FRK D VV+++V++VDD+ VAG++ + EL LN
Sbjct: 35 VDFFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLRIPAGYGDKSHKIVQAERAIYGLKQSGRQWGYHAADTLV-ENGFEQCKADPCVFRKMVDEVVVMVIVIYVDDILVAGSDEDCEELLASLN 173
BLAST of mRNA_H-elongata_contig6429.14017.1 vs. uniprot
Match: A0A6H5JU90_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU90_9PHAE) HSP 1 Score: 123 bits (308), Expect = 7.590e-30 Identity = 62/140 (44.29%), Postives = 88/140 (62.86%), Query Frame = 0
Query: 1 MDFFQTVAPTSAAASVNIVLAVTNELGYPVNHLDTAQAVMQAELDCTVYMKLPGGFSSLSGNIVRLEKALYGRRQSGLLWNSLLVKTFVMRHGMEQCKTDPCMFRKFRDGKVVLILVVHVDDMTVAGTENEVSELHPVLN 140
+D+F + +P ++AS+ ++LAV NE G +NH D QA A LD V++KLP G S I + E+A+YG +QSG W T V +G EQCK DPC+FRK D VV+I+V++VDD+ VAG++ + EL LN
Sbjct: 477 VDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLV-ENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLN 615
BLAST of mRNA_H-elongata_contig6429.14017.1 vs. uniprot
Match: A0A6H5JTV6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTV6_9PHAE) HSP 1 Score: 123 bits (308), Expect = 7.750e-30 Identity = 62/140 (44.29%), Postives = 88/140 (62.86%), Query Frame = 0
Query: 1 MDFFQTVAPTSAAASVNIVLAVTNELGYPVNHLDTAQAVMQAELDCTVYMKLPGGFSSLSGNIVRLEKALYGRRQSGLLWNSLLVKTFVMRHGMEQCKTDPCMFRKFRDGKVVLILVVHVDDMTVAGTENEVSELHPVLN 140
+D+F + +P ++AS+ ++LAV NE G +NH D QA A LD V++KLP G S I + E+A+YG +QSG W T V +G EQCK DPC+FRK D VV+I+V++VDD+ VAG++ + EL LN
Sbjct: 616 VDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLV-ENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLN 754
BLAST of mRNA_H-elongata_contig6429.14017.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 123 bits (308), Expect = 7.850e-30 Identity = 62/140 (44.29%), Postives = 88/140 (62.86%), Query Frame = 0
Query: 1 MDFFQTVAPTSAAASVNIVLAVTNELGYPVNHLDTAQAVMQAELDCTVYMKLPGGFSSLSGNIVRLEKALYGRRQSGLLWNSLLVKTFVMRHGMEQCKTDPCMFRKFRDGKVVLILVVHVDDMTVAGTENEVSELHPVLN 140
+D+F + +P ++AS+ ++LAV NE G +NH D QA A LD V++KLP G S I + E+A+YG +QSG W T V +G EQCK DPC+FRK D VV+I+V++VDD+ VAG++ + EL LN
Sbjct: 816 VDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLV-ENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLN 954
BLAST of mRNA_H-elongata_contig6429.14017.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 123 bits (308), Expect = 7.980e-30 Identity = 62/140 (44.29%), Postives = 88/140 (62.86%), Query Frame = 0
Query: 1 MDFFQTVAPTSAAASVNIVLAVTNELGYPVNHLDTAQAVMQAELDCTVYMKLPGGFSSLSGNIVRLEKALYGRRQSGLLWNSLLVKTFVMRHGMEQCKTDPCMFRKFRDGKVVLILVVHVDDMTVAGTENEVSELHPVLN 140
+D+F + +P ++AS+ ++LAV NE G +NH D QA A LD V++KLP G S I + E+A+YG +QSG W T V +G EQCK DPC+FRK D VV+I+V++VDD+ VAG++ + EL LN
Sbjct: 1195 VDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLV-ENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLN 1333
BLAST of mRNA_H-elongata_contig6429.14017.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 123 bits (308), Expect = 7.990e-30 Identity = 62/140 (44.29%), Postives = 88/140 (62.86%), Query Frame = 0
Query: 1 MDFFQTVAPTSAAASVNIVLAVTNELGYPVNHLDTAQAVMQAELDCTVYMKLPGGFSSLSGNIVRLEKALYGRRQSGLLWNSLLVKTFVMRHGMEQCKTDPCMFRKFRDGKVVLILVVHVDDMTVAGTENEVSELHPVLN 140
+D+F + +P ++AS+ ++LAV NE G +NH D QA A LD V++KLP G S I + E+A+YG +QSG W T V +G EQCK DPC+FRK D VV+I+V++VDD+ VAG++ + EL LN
Sbjct: 1215 VDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLV-ENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDEDCEELLASLN 1353
BLAST of mRNA_H-elongata_contig6429.14017.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 123 bits (308), Expect = 8.010e-30 Identity = 62/140 (44.29%), Postives = 88/140 (62.86%), Query Frame = 0
Query: 1 MDFFQTVAPTSAAASVNIVLAVTNELGYPVNHLDTAQAVMQAELDCTVYMKLPGGFSSLSGNIVRLEKALYGRRQSGLLWNSLLVKTFVMRHGMEQCKTDPCMFRKFRDGKVVLILVVHVDDMTVAGTENEVSELHPVLN 140
+D+F + +P ++AS+ ++LAV NE G +NH D QA A LD V++KLP G S I + E+A+YG +QSG W T V +G EQCK DPC+FRK D VV+I+V++VDD+ VAG++ + EL LN
Sbjct: 1358 VDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLV-ENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLN 1496
BLAST of mRNA_H-elongata_contig6429.14017.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE) HSP 1 Score: 121 bits (303), Expect = 3.520e-29 Identity = 60/135 (44.44%), Postives = 86/135 (63.70%), Query Frame = 0
Query: 1 MDFFQTVAPTSAAASVNIVLAVTNELGYPVNHLDTAQAVMQAELDCTVYMKLPGGFSSLSGNIVRLEKALYGRRQSGLLWNSLLVKTFVMRHGMEQCKTDPCMFRKFRDGKVVLILVVHVDDMTVAGTENEVSEL 135
+D+F + +P ++AS+ ++LAV NE G +NH D QA A LD V++KLP G S I + E+A+YG +QSG W T V +G EQCK DPC+FRK D VV+I+V++VDD+ VAG++ + EL
Sbjct: 370 VDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHEIAKAERAIYGLKQSGRQWGYHAADTLV-ENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEEL 503
BLAST of mRNA_H-elongata_contig6429.14017.1 vs. uniprot
Match: A0A6H5KFN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFN5_9PHAE) HSP 1 Score: 119 bits (299), Expect = 4.640e-29 Identity = 59/134 (44.03%), Postives = 85/134 (63.43%), Query Frame = 0
Query: 1 MDFFQTVAPTSAAASVNIVLAVTNELGYPVNHLDTAQAVMQAELDCTVYMKLPGGFSSLSGNIVRLEKALYGRRQSGLLWNSLLVKTFVMRHGMEQCKTDPCMFRKFRDGKVVLILVVHVDDMTVAGTENEVSE 134
+D+F + +P ++AS+ ++LAV NE G +NH D QA A LD V++KLP G S I + E+A+YG +QSG W T V +G EQCK DPC+FRK D VV+I+V++VDD+ VAG++ + E
Sbjct: 116 VDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLV-ENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEE 248
BLAST of mRNA_H-elongata_contig6429.14017.1 vs. uniprot
Match: A0A6H5JQW4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQW4_9PHAE) HSP 1 Score: 120 bits (302), Expect = 5.050e-29 Identity = 62/140 (44.29%), Postives = 89/140 (63.57%), Query Frame = 0
Query: 1 MDFFQTVAPTSAAASVNIVLAVTNELGYPVNHLDTAQAVMQAELDCTVYMKLPGGFSSLSGNIVRLEKALYGRRQSGLLWNSLLVKTFVMRHGMEQCKTDPCMFRKFRDGKVVLILVVHVDDMTVAGTENEVSELHPVLN 140
+D+F++ +P ++AS+ ++LAV NE G +NH D QA A LD V+ +LP G S IV+ E+A+YG +QSG W T V +G EQCK DPC+FRK D VV+I+V++VDD+ VAG++ + EL LN
Sbjct: 925 VDYFRSSSPCPSSASIMLMLAVANEKGMNLNHWDVKQASPHATLDEEVFPRLPAGCGDKSHQIVKAERAIYGLKQSGRQWGYHAADTLV-ENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLN 1063 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6429.14017.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig6429.14017.1 ID=prot_H-elongata_contig6429.14017.1|Name=mRNA_H-elongata_contig6429.14017.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=141bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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