prot_H-elongata_contig64229.14010.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig64229.14010.1
Unique Nameprot_H-elongata_contig64229.14010.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length316
Homology
BLAST of mRNA_H-elongata_contig64229.14010.1 vs. uniprot
Match: D8LHG4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHG4_ECTSI)

HSP 1 Score: 395 bits (1014), Expect = 9.860e-128
Identity = 214/329 (65.05%), Postives = 253/329 (76.90%), Query Frame = 0
Query:    1 GSFTPGDEVNVRVKWQEKIFGPREIIAISKG-----KDRRQRGAITIRSPSSRLERHYAGHVEDMRQEHVDPLESLSEVMLFTYTDKDGFVPPSDSEGSR---LMNGDGGPYSHLEEAVVNIPRNPASYSMETTD----GSRGVEEVWMAGSRDKKSGVRVSETAAAIQAHLKREDKFKVMYIMAAVDVDVPNAKRITKAGAAAVAARGRGGSGSFWGGGQDEV-IHIHERVICSIKAHQNGTLEVAPGFSEEEPESGDEGAFLTDHTVKVMDKEGARLTIYRFTSPSGGVFSYTVENDAELGGGVEEIEAWEAEESSKELWRKAARQQ 316
            GSF PGDE ++RVKWQEK+FGP +++ +S G     K ++QR      +  SRLER YAGH+ED+R++ VDPLESLSEVMLFTYTDKDGFVPPSD  G+    L  GDGGP+S LEEAV ++PR  AS  +ET      G RG      +G R+ ++GV  S+TAA IQAHL REDK+KVMYIMAAVDVDV  A ++ K+ AAA       G GS W  G+D V IH HE+V+CSIKAHQNGTLE+APGFS EEPESGDEGAFLTDHT+KVMDKEGARLT YRFTSPSGGVFSYTVEND+E GGGVEEIEAWEAEE+S++LW+KA+RQQ
Sbjct:   58 GSFLPGDEADIRVKWQEKVFGPEDVVTLSSGQRRGGKSQQQRAVGPPDNALSRLERDYAGHLEDLRRDGVDPLESLSEVMLFTYTDKDGFVPPSDKAGAAEGGLTTGDGGPFSCLEEAVTSMPRTVASSLLETAKTAAGGGRGXXXXXASG-RNSRAGV--SDTAAVIQAHLAREDKYKVMYIMAAVDVDVREATKVAKSRAAAP------GGGSRWRQGEDGVGIHAHEQVVCSIKAHQNGTLEIAPGFSAEEPESGDEGAFLTDHTLKVMDKEGARLTTYRFTSPSGGVFSYTVENDSEPGGGVEEIEAWEAEEASRDLWKKASRQQ 377          
BLAST of mRNA_H-elongata_contig64229.14010.1 vs. uniprot
Match: A0A7S1XTY5_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XTY5_9STRA)

HSP 1 Score: 111 bits (278), Expect = 1.410e-23
Identity = 103/326 (31.60%), Postives = 142/326 (43.56%), Query Frame = 0
Query:   15 WQEKIFGPREIIAISK-GKDRRQRGAITIRSPSSRLERHYAGHVEDMRQEHVDPLES-----------LSEVMLFTYTDKDGFVPPSDSEGSRLMNGDGGPYSHLEEAVVNIPRNPASYSMETTDGSRGVEEVWMAGSRDKKSGVRVSETAAA----IQAHLKREDKFKVMYIMAAVDVDVPNAKRITKAGAAAVAAR---------GRGGSGSFWGGGQDE-----VIHIHERVICSIKAHQNGTLEVAPGFSEEEPESGDEGA-FLTDHTVKVMDKEGARLTIYRFTSPSGGVFSYTVENDAELGGGVE--EIEAWEAEESSKE 307
            WQEK FGP E+I  +   K      A        R     A H  +   E  + L S             + ML+TYTD D FV P D+   R                ++I ++  SY+M   +             R K S    S+T  A    +QA L R++ +KVMYIMAAV+VD   A+ + K   AA   R            G+G   G   +E      +  H  V+C IK + +G +EV PGFSE + ES DEG  F+ D  +K   ++G +LT +RF +  G +F Y VEN  E+    E   IEA E E   K+
Sbjct:   66 WQEKKFGPHELIKYNAPNKPHNPTRAEQTYYSMFRRRNWQAKHSGEGTSEEDEALSSARLHGDVTAPDFRQAMLYTYTDGDSFVSP-DAINKRSTTS------------ISIHKSNISYAMTYLN------------QRTKGSSENASDTIPAQVQKLQAALDRQEPYKVMYIMAAVEVDPKEAEELLKKERAAKTTRPIIRRSTIQNLPGAGKLAGPSSEERRPYKALKAHHEVLCQIKLYTSGKMEVQPGFSEAQAESDDEGGGFVDDVALKTQLEQGPKLTTFRFQTAEGRIFEYAVENVNEVDNDDELINIEAHEREIEKKQ 366          
BLAST of mRNA_H-elongata_contig64229.14010.1 vs. uniprot
Match: A0A7S2BNE2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BNE2_9STRA)

HSP 1 Score: 100 bits (250), Expect = 5.280e-20
Identity = 79/219 (36.07%), Postives = 109/219 (49.77%), Query Frame = 0
Query:   74 VMLFTYTDKDGFVPPSDSEGSRLMNGDGGPYSHLEEAVVNIPRNPASYSMETTDGSRGVEEVWMAGSRDKKSGVRVSETAAAIQAHLKREDKFKVMYIMAAVDVDVPNAKR-ITKAGAAAVAARGRGGSGSFWGGGQDEVIHIHERVICSIKAHQNGTLEVAPGFSEEEPESGDEGAFLTDHTVKVMDKEGARLTIY--RFTSPS----GGVFSYTVEN 285
            V LFTY D D F P  +         + GP   L EA+ NI  N AS                            +S  A+++ AHL R+  +KVMY+MAAV VD+  A+  I K  A  +               +D  I + E V+C+IK H+ G+LEV PGFSEEEPES D+G F +  ++K++ + GARLT +  R +SP      GV+ YT+EN
Sbjct:   36 VHLFTYVDTDSFSPSEEKVPRTNSMVEPGP---LAEAMGNI-NNKAS----------------------------LSAGASSVHAHLTRDGMYKVMYLMAAVPVDLSKAEAAIDKKDADRL---------------RDRNI-VQEHVLCAIKFHKKGSLEVTPGFSEEEPESDDDGPFRSAGSLKIIAERGARLTTFTLRVSSPIDGSVAGVYQYTIEN 206          
BLAST of mRNA_H-elongata_contig64229.14010.1 vs. uniprot
Match: A0A2R5GPF1_9STRA (Meckel syndrome type 1 protein-like n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GPF1_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 4.460e-17
Identity = 83/279 (29.75%), Postives = 124/279 (44.44%), Query Frame = 0
Query:   15 WQEKIFGPREIIAISKGKDRRQRGAITIRSPSSRLERHYAGHVEDMRQEHVDPLESLSEVMLFTYTDKDGFVPPSDSEGSRLMNGDGGPYSHLEEAVVNIP----RNPASYSMETTDGSRGVEEVWMAGSRDKKSGVRVSETAAAIQAHLKREDKFKVMYIMAAVDVDVPNAKRITKAGAAAVAARGRGGSGSFWGGGQDEVIHIHERVICSIKAHQNGTL-EVAPGFSEEEPESGDEGAFLTDHTVKVMDKEGARLTIYRFTSPSGGVFSYTVENDAE 288
            WQEK FGPRE++     +D      +      + +E  Y   +   R+   D L+    VMLFTYTDKDGFVP ++     +   +    + + E++V IP    R       E  D   G ++   A S ++ SG    E +A  +    RE  FKV Y+MAAVDVD    + + K              G F+           E V+C++K  ++G+L E+ PGFS     +    A   D      D      T YRF +P G ++ Y++ N+AE
Sbjct:  149 WQEKKFGPRELVRYLGSEDEEGNAGMG----RTAIEAEYLEQIARRRRFGEDLLQDAERVMLFTYTDKDGFVPKNEMT-KFVTTSENFSLNPVAESIVTIPGTGGRVAEGREHERDDAFDGADDGDYA-SLERTSGT--GEVSAGQRVF--RESPFKVFYLMAAVDVDAAKLRSLRKE------------DGKFY-----------EVVLCTVKVKRDGSLVEMQPGFSASPSTTAALRARTNDE-----DSGPPPTTWYRFKTPFGSLYEYSLINEAE 389          
BLAST of mRNA_H-elongata_contig64229.14010.1 vs. uniprot
Match: A0A7R9Y8G3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y8G3_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 6.580e-15
Identity = 60/170 (35.29%), Postives = 86/170 (50.59%), Query Frame = 0
Query:  125 TTDGSRGVEEVWMAGSRDKKSGV----RVSETAAAIQAHLKREDKFKVMYIMAAVDVDVPNAKRITKAGAAAVAARGRGGSGSFWGGGQDEVIHIHERVICSIKAHQNGTLEVAPGFSEEEPESGDE-GAFLTDHTVKVMDKEGARLTIYRFTSPSGGVFSYTVENDAEL 289
            T+  S+    V M     + SG     RV + A  IQA L RE+ +K MYIMAAV+VD   A  + K        RG+           DE +  H +V+  ++ + +G LEV PG SE+ PES D+ G +L D         GA+L  YRF + +G +F Y +EN+ E+
Sbjct:    4 TSAASKSTLAVAMTYMNRRTSGAFEHHRVPKQAQKIQAALLREEPYKAMYIMAAVEVDAKKAAELVKE----QQRRGKRRVVPSMIDFGDE-LDCHHQVLAQLRLYPSGKLEVYPGLSEDTPESDDDHGGYLDDDACDRAAAVGAKLVTYRFQTGNGRLFEYAIENENEV 168          
BLAST of mRNA_H-elongata_contig64229.14010.1 vs. uniprot
Match: A0A7S2K7H6_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K7H6_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 1.240e-9
Identity = 51/191 (26.70%), Postives = 92/191 (48.17%), Query Frame = 0
Query:  104 YSHLEEAVVNIPRNPASYSMETTDG---SRGVEEVWMAGSRDKKSGVRVSETAAAIQAHLKREDKFKVMYIMAAVDVDVPNAKRITKAGAAAVAARGRGGSGSFWGGGQDEVIH---IHERVICSIKAHQNGTLEVAPGFSEEEPESGDEGAFLTDHTVKV-MDKEGA-RLTIYRFTSPSGGVFSYTVEND 286
            Y++ +  V NI  NP   + ETT     +  +  +    +     G+ ++++AA +Q  L   +  + MY+MAAVD  +   ++                      GG+ +  +    H++V+C++K H+NG LEV PGFS     S DE   +    + + +D + A R+T + FTSP G ++ Y++ N+
Sbjct:  116 YNNRDGFVPNIESNPNLTTSETTKHLPLTEAIPSLQRRQNTGNSGGMPLTKSAAHVQNRLTEGNIIETMYVMAAVDTKMSKWEK----------------------GGKFDTTNDPDYHQQVLCALKLHKNGLLEVTPGFS-----SIDERLQINPSLLTLPLDMDPAHRITTFTFTSPEGSLYEYSIINE 279          
BLAST of mRNA_H-elongata_contig64229.14010.1 vs. uniprot
Match: A0A7S2RYJ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RYJ1_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 4.130e-9
Identity = 54/173 (31.21%), Postives = 83/173 (47.98%), Query Frame = 0
Query:   15 WQEKIFGPREIIAISKGKDRRQRGAITIRSPSSRLERHYAGHVEDMRQEHVDPLESLSEVMLFTYTDKDGFVPPSDSEGSRLMN-GDGGPYSHLEEAVVNIPRNPASYSMETTDGSRGVEEVWMAGSRDKK-----SGVRVSETA---AAIQAHLKREDKFKVMYIMAAVDVD 178
            WQEK FGPRE+      +D        I+       +    + E++ Q+       LS+VMLFTYTDKDGFVP  +SE ++ +   +    + + E+++ IP N      +  D      EV+  G   +      + VR S+ +    +    + RE  FKV Y+MAAVD+D
Sbjct:   15 WQEKKFGPRELQKYMPSEDSHAHARTAIQVEYREQLKRRLRYGENLWQD-------LSQVMLFTYTDKDGFVP--NSEFTKFVTTSEEFVLNSVAESIITIPENGGKIVQQDEDDEN---EVYSDGDEHENDSNINNAVRRSKNSLNEVSAGQRIFRETPFKVFYLMAAVDID 175          
BLAST of mRNA_H-elongata_contig64229.14010.1 vs. uniprot
Match: A0A7S4J0B0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J0B0_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 4.940e-9
Identity = 31/75 (41.33%), Postives = 44/75 (58.67%), Query Frame = 0
Query:  215 IHERVICSIKAHQNGTLEVAPGFSEEEPESGD----EGAFLTDHTVKVMDKEGARLTIYRFTSPSGGVFSYTVEN 285
            +HE V+C ++ H +G LEV PGFSE EPE  D    +  F++D T       G  LT + F+SP G  + YT+E+
Sbjct:    7 LHEEVLCVVRYHSSGLLEVKPGFSEVEPEEDDLYYHDRIFISDATCTTRRSVGPCLTTFCFSSPQGSTYEYTLEH 81          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig64229.14010.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LHG4_ECTSI9.860e-12865.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1XTY5_9STRA1.410e-2331.60Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S2BNE2_9STRA5.280e-2036.07Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A2R5GPF1_9STRA4.460e-1729.75Meckel syndrome type 1 protein-like n=1 Tax=Hondae... [more]
A0A7R9Y8G3_9STRA6.580e-1535.29Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S2K7H6_9STRA1.240e-926.70Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2RYJ1_9STRA4.130e-931.21Hypothetical protein (Fragment) n=1 Tax=labyrinthu... [more]
A0A7S4J0B0_9STRA4.940e-941.33Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig64229contigH-elongata_contig64229:544..3409 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig64229.14010.1mRNA_H-elongata_contig64229.14010.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig64229 544..3409 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig64229.14010.1 ID=prot_H-elongata_contig64229.14010.1|Name=mRNA_H-elongata_contig64229.14010.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=316bp
GSFTPGDEVNVRVKWQEKIFGPREIIAISKGKDRRQRGAITIRSPSSRLE
RHYAGHVEDMRQEHVDPLESLSEVMLFTYTDKDGFVPPSDSEGSRLMNGD
GGPYSHLEEAVVNIPRNPASYSMETTDGSRGVEEVWMAGSRDKKSGVRVS
ETAAAIQAHLKREDKFKVMYIMAAVDVDVPNAKRITKAGAAAVAARGRGG
SGSFWGGGQDEVIHIHERVICSIKAHQNGTLEVAPGFSEEEPESGDEGAF
LTDHTVKVMDKEGARLTIYRFTSPSGGVFSYTVENDAELGGGVEEIEAWE
AEESSKELWRKAARQQ
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