mRNA_H-elongata_contig64210.14007.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig64210.14007.1 vs. uniprot
Match: A0A6H5JS50_9PHAE (PKS_ER domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JS50_9PHAE) HSP 1 Score: 112 bits (281), Expect = 1.210e-24 Identity = 55/80 (68.75%), Postives = 63/80 (78.75%), Query Frame = 2
Query: 29 MRSVVCTTWGPPSALNVQDTGGPPPPAGEGEVAIAVHACAVNFSDVLVIQGKYQVKPKLPFVPGGEVAGVVTDVGEGCTR 268
MR VC WGPPS+L+++D G P P G+GEVAIAV ACAVNF D+LV+QGKYQ KPKLPF PGGE+AGVVT VG G R
Sbjct: 1 MRWCVCKQWGPPSSLSIED-GPPLPQPGKGEVAIAVSACAVNFPDLLVVQGKYQTKPKLPFAPGGEIAGVVTAVGAGSAR 79
BLAST of mRNA_H-elongata_contig64210.14007.1 vs. uniprot
Match: A0A538FJN0_9ACTN (NADPH:quinone oxidoreductase family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538FJN0_9ACTN) HSP 1 Score: 100 bits (248), Expect = 3.170e-20 Identity = 53/103 (51.46%), Postives = 70/103 (67.96%), Query Frame = 2
Query: 29 MRSVVCTTWGPPSALNVQDTGGPPPPAGEGEVAIAVHACAVNFSDVLVIQGKYQVKPKLPFVPGGEVAGVVTDVGEGC---TRSESVLTATGDGYVVVFAVLD 328
M++++C T+GPP +L V++ P P G G+V I VHACAVNF D+L+IQ KYQ KP+LPF PGGEVAGV+ VGEG + VL +TG G + V+D
Sbjct: 1 MKALLCKTFGPPESLVVEEVEDPRP--GPGQVVIDVHACAVNFPDLLIIQDKYQFKPQLPFSPGGEVAGVIGAVGEGVGGVAVGDRVLASTGWGGLAEKVVID 101
BLAST of mRNA_H-elongata_contig64210.14007.1 vs. uniprot
Match: A0A317E298_9PROT (NADPH:quinone oxidoreductase n=2 Tax=Zavarzinia aquatilis TaxID=2211142 RepID=A0A317E298_9PROT) HSP 1 Score: 99.8 bits (247), Expect = 4.110e-20 Identity = 49/94 (52.13%), Postives = 65/94 (69.15%), Query Frame = 2
Query: 29 MRSVVCTTWGPPSALNVQDTGGPPPPAGEGEVAIAVHACAVNFSDVLVIQGKYQVKPKLPFVPGGEVAGVVTDVGE---GCTRSESVLTATGDG 301
M+ ++C +GPP +L ++D GP P G+GEV + +HA VNF DVL+IQGKYQ KP++PF PGGE AGVVT+VGE G + V+ TG G
Sbjct: 1 MKQLLCKAYGPPESLMLED--GPAPALGKGEVRVRLHAAGVNFPDVLIIQGKYQFKPEMPFAPGGEAAGVVTEVGERVSGFAVGDRVIVMTGWG 92
BLAST of mRNA_H-elongata_contig64210.14007.1 vs. uniprot
Match: A0A8D5WMW7_9PROT (Alcohol dehydrogenase n=1 Tax=Alphaproteobacteria bacterium SO-S41 TaxID=2829083 RepID=A0A8D5WMW7_9PROT) HSP 1 Score: 99.4 bits (246), Expect = 6.350e-20 Identity = 54/103 (52.43%), Postives = 67/103 (65.05%), Query Frame = 2
Query: 29 MRSVVCTTWGPPSALNVQDTGGPPPPAGEGEVAIAVHACAVNFSDVLVIQGKYQVKPKLPFVPGGEVAGVVTDVGEGCTR---SESVLTATGDGYVVVFAVLD 328
MR+V+C +GPP +L V+D P P AG+G+ I+V A VNF DVL+IQ KYQ KP LPF PGGEVAG+V +VGEG T + VL +TG G V D
Sbjct: 1 MRAVLCKEYGPPDSLVVEDV--PSPKAGKGQYVISVKAAGVNFPDVLIIQNKYQFKPALPFSPGGEVAGIVKEVGEGVTHLKPGDRVLGSTGWGGFAEEVVAD 101
BLAST of mRNA_H-elongata_contig64210.14007.1 vs. uniprot
Match: UPI0019AF0637 (NADPH:quinone oxidoreductase family protein n=1 Tax=Arcicella sp. TaxID=1872628 RepID=UPI0019AF0637) HSP 1 Score: 97.8 bits (242), Expect = 2.040e-19 Identity = 46/94 (48.94%), Postives = 64/94 (68.09%), Query Frame = 2
Query: 29 MRSVVCTTWGPPSALNVQDTGGPPPPAGEGEVAIAVHACAVNFSDVLVIQGKYQVKPKLPFVPGGEVAGVVTDVGEGCTR---SESVLTATGDG 301
M++V+C T+GPP L V++ P A G+V I+V AC VNF D L+IQGKYQ+KP +PF PGGEV+G++ ++GEG T + V + TG G
Sbjct: 1 MKAVLCKTYGPPETLVVEEVASPS--ASRGKVVISVKACGVNFPDTLIIQGKYQIKPPMPFSPGGEVSGIIKEIGEGVTHLKVGDKVFSLTGFG 92
BLAST of mRNA_H-elongata_contig64210.14007.1 vs. uniprot
Match: A0A520HCG6_9BURK (NADPH:quinone oxidoreductase family protein n=1 Tax=Variovorax sp. TaxID=1871043 RepID=A0A520HCG6_9BURK) HSP 1 Score: 97.1 bits (240), Expect = 4.130e-19 Identity = 49/94 (52.13%), Postives = 61/94 (64.89%), Query Frame = 2
Query: 29 MRSVVCTTWGPPSALNVQDTGGPPPPAGEGEVAIAVHACAVNFSDVLVIQGKYQVKPKLPFVPGGEVAGVVTDVGEGCTR---SESVLTATGDG 301
M++V+C +GPPS L V+D P P G G + IA AC VNF D L+IQG+YQ KP PF PGGEVAGVV ++GEG T + V+ AT G
Sbjct: 1 MKAVLCRAFGPPSVLRVEDVPSPRP--GAGRIVIATRACGVNFPDTLIIQGRYQFKPDFPFSPGGEVAGVVKELGEGVTGLRIGDRVIAATTHG 92
BLAST of mRNA_H-elongata_contig64210.14007.1 vs. uniprot
Match: E8U6G2_DEIML (NADPH:quinone reductase n=1 Tax=Deinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946 / LB-34) TaxID=709986 RepID=E8U6G2_DEIML) HSP 1 Score: 96.7 bits (239), Expect = 5.270e-19 Identity = 48/77 (62.34%), Postives = 56/77 (72.73%), Query Frame = 2
Query: 29 MRSVVCTTWGPPSALNVQDTGGPPPPAGEGEVAIAVHACAVNFSDVLVIQGKYQVKPKLPFVPGGEVAGVVTDVGEG 259
M +VVC WGPP +L V+ P P AG GEV +AV A +VNF DVL+IQGKYQV+P+LPF PG E AGVV VGEG
Sbjct: 1 MDAVVCRAWGPPESLVVESQ--PEPVAGAGEVVLAVRAASVNFPDVLMIQGKYQVRPELPFTPGAEAAGVVLSVGEG 75
BLAST of mRNA_H-elongata_contig64210.14007.1 vs. uniprot
Match: A0A4V1RWE2_9BACT (NADPH:quinone oxidoreductase family protein n=3 Tax=Spirosoma TaxID=107 RepID=A0A4V1RWE2_9BACT) HSP 1 Score: 96.7 bits (239), Expect = 5.350e-19 Identity = 47/94 (50.00%), Postives = 63/94 (67.02%), Query Frame = 2
Query: 29 MRSVVCTTWGPPSALNVQDTGGPPPPAGEGEVAIAVHACAVNFSDVLVIQGKYQVKPKLPFVPGGEVAGVVTDVGEGCTR---SESVLTATGDG 301
M++++C +GPP L + D P AG G+V I V AC VNF D L+I+GKYQ+KP +PF PGGEVAG+VT+VGEG + + V + TG G
Sbjct: 1 MKAILCEQYGPPEQLVLTDVA--QPKAGAGQVVIQVEACGVNFPDTLIIEGKYQIKPPMPFSPGGEVAGIVTEVGEGVSHLRAGDRVFSLTGYG 92
BLAST of mRNA_H-elongata_contig64210.14007.1 vs. uniprot
Match: A0A6G9AW29_9BACT (NADPH:quinone oxidoreductase family protein n=2 Tax=Spirosoma TaxID=107 RepID=A0A6G9AW29_9BACT) HSP 1 Score: 96.3 bits (238), Expect = 7.240e-19 Identity = 48/94 (51.06%), Postives = 64/94 (68.09%), Query Frame = 2
Query: 29 MRSVVCTTWGPPSALNVQDTGGPPPPAGEGEVAIAVHACAVNFSDVLVIQGKYQVKPKLPFVPGGEVAGVVTDVGEGCTR---SESVLTATGDG 301
M++V+C +GPP L V++ P AG+G+V I+V AC VNF D L+I+GKYQ KP PF PGGEVAG+V +VGEG T ++V + TG G
Sbjct: 1 MKAVLCKQFGPPETLVVEEIESPK--AGKGQVVISVKACGVNFPDTLMIEGKYQFKPSFPFSPGGEVAGIVKEVGEGVTHLNVGDNVFSLTGHG 92
BLAST of mRNA_H-elongata_contig64210.14007.1 vs. uniprot
Match: A0A534U5N6_9DELT (NADPH:quinone oxidoreductase family protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534U5N6_9DELT) HSP 1 Score: 96.3 bits (238), Expect = 7.650e-19 Identity = 51/94 (54.26%), Postives = 63/94 (67.02%), Query Frame = 2
Query: 29 MRSVVCTTWGPPSALNVQDTGGPPPPAGEGEVAIAVHACAVNFSDVLVIQGKYQVKPKLPFVPGGEVAGVVTDVGEGCTRSE---SVLTATGDG 301
M++V+C +GPP +L V+D P P GEV +AV A VNF DVL+IQ KYQ +P LPF PGGEVAGVVT +GEG T E V+ +TG G
Sbjct: 1 MKAVLCKEYGPPDSLVVEDVASPTP--NRGEVLLAVRAAGVNFPDVLIIQNKYQFRPPLPFAPGGEVAGVVTALGEGVTTLEIGDRVIGSTGWG 92 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig64210.14007.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig64210.14007.1 >prot_H-elongata_contig64210.14007.1 ID=prot_H-elongata_contig64210.14007.1|Name=mRNA_H-elongata_contig64210.14007.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=104bp MRSVVCTTWGPPSALNVQDTGGPPPPAGEGEVAIAVHACAVNFSDVLVIQback to top mRNA from alignment at H-elongata_contig64210:2..1458- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig64210.14007.1 ID=mRNA_H-elongata_contig64210.14007.1|Name=mRNA_H-elongata_contig64210.14007.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1457bp|location=Sequence derived from alignment at H-elongata_contig64210:2..1458- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig64210:2..1458- >mRNA_H-elongata_contig64210.14007.1 ID=mRNA_H-elongata_contig64210.14007.1|Name=mRNA_H-elongata_contig64210.14007.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=624bp|location=Sequence derived from alignment at H-elongata_contig64210:2..1458- (Himanthalia elongata Himel1 dioecious)back to top |