prot_H-elongata_contig64199.14006.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig64199.14006.1
Unique Name	prot_H-elongata_contig64199.14006.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	117

Homology

[Close]

BLAST of mRNA_H-elongata_contig64199.14006.1 vs. uniprot
Match: A0A7R9W7V1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W7V1_9STRA)

HSP 1 Score: 177 bits (449), Expect = 2.620e-54
Identity = 89/108 (82.41%), Postives = 100/108 (92.59%), Query Frame = 0

Query:    8 QVIANMTVGKDVAMLFTDVINCIQTENIELKKLVYLYLINYAKTQPELTLLAVNTFVKDANDPNPLIRALAVRTMGCIRVEKITEYLCEPLRKALRDDVSHDSKTPRV 115
            +VIA+MTVGKDV+MLFTDV+NC+QT NIELKKLVYLYLINYAK+QPELTLLAVNTFVKDANDPNPLIRALAVRTMGCIRV++ITEYLCEPL +ALRD+  +  KT  V
Sbjct:   51 KVIASMTVGKDVSMLFTDVLNCVQTGNIELKKLVYLYLINYAKSQPELTLLAVNTFVKDANDPNPLIRALAVRTMGCIRVDRITEYLCEPLSRALRDEDPYVRKTAAV 158

[Close]

BLAST of mRNA_H-elongata_contig64199.14006.1 vs. uniprot
Match: A0A7S2EVX9_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EVX9_TRICV)

HSP 1 Score: 177 bits (449), Expect = 2.780e-54
Identity = 89/108 (82.41%), Postives = 100/108 (92.59%), Query Frame = 0

Query:    8 QVIANMTVGKDVAMLFTDVINCIQTENIELKKLVYLYLINYAKTQPELTLLAVNTFVKDANDPNPLIRALAVRTMGCIRVEKITEYLCEPLRKALRDDVSHDSKTPRV 115
            +VIA+MTVGKDV+MLFTDV+NC+QT NIELKKLVYLYLINYAK+QPELTLLAVNTFVKDANDPNPLIRALAVRTMGCIRV++ITEYLCEPL +ALRD+  +  KT  V
Sbjct:   10 KVIASMTVGKDVSMLFTDVLNCVQTGNIELKKLVYLYLINYAKSQPELTLLAVNTFVKDANDPNPLIRALAVRTMGCIRVDRITEYLCEPLSRALRDEDPYVRKTAAV 117

[Close]

BLAST of mRNA_H-elongata_contig64199.14006.1 vs. uniprot
Match: A0A836CH70_9STRA (Coatomer protein complex, beta sub-unit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH70_9STRA)

HSP 1 Score: 188 bits (478), Expect = 2.570e-53
Identity = 97/108 (89.81%), Postives = 101/108 (93.52%), Query Frame = 0

Query:    8 QVIANMTVGKDVAMLFTDVINCIQTENIELKKLVYLYLINYAKTQPELTLLAVNTFVKDANDPNPLIRALAVRTMGCIRVEKITEYLCEPLRKALRDDVSHDSKTPRV 115
            +VIANMTVGKDV+MLFTDVINCIQTENIELKKLVYLYLINYAKTQPELTLLAVNTFVKDA DPNPLIRALAVRTMGCIRVEKITEYLCEPLR+ALRDD  +  KT  V
Sbjct:   46 KVIANMTVGKDVSMLFTDVINCIQTENIELKKLVYLYLINYAKTQPELTLLAVNTFVKDAKDPNPLIRALAVRTMGCIRVEKITEYLCEPLRRALRDDDPYVRKTAAV 153

[Close]

BLAST of mRNA_H-elongata_contig64199.14006.1 vs. uniprot
Match: A0A482RX86_9ARCH (Adaptin_N domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RX86_9ARCH)

HSP 1 Score: 174 bits (441), Expect = 1.850e-52
Identity = 87/108 (80.56%), Postives = 97/108 (89.81%), Query Frame = 0

Query:    8 QVIANMTVGKDVAMLFTDVINCIQTENIELKKLVYLYLINYAKTQPELTLLAVNTFVKDANDPNPLIRALAVRTMGCIRVEKITEYLCEPLRKALRDDVSHDSKTPRV 115
            QVIANMTVGKDV+ LF DVINCIQT+N+ELKKLVYLYLINYAK+QP+L LLAVNTFVKDANDPNPLIRALA+RTMGCIRVEKITEYLCEPL + L+D+  +  KT  V
Sbjct:   22 QVIANMTVGKDVSTLFPDVINCIQTDNLELKKLVYLYLINYAKSQPDLALLAVNTFVKDANDPNPLIRALAIRTMGCIRVEKITEYLCEPLSRCLKDEDPYVRKTAAV 129

[Close]

BLAST of mRNA_H-elongata_contig64199.14006.1 vs. uniprot
Match: A0A6H5J742_9PHAE (B2-adapt-app_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J742_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 2.090e-52
Identity = 96/103 (93.20%), Postives = 97/103 (94.17%), Query Frame = 0

Query:   13 MTVGKDVAMLFTDVINCIQTENIELKKLVYLYLINYAKTQPELTLLAVNTFVKDANDPNPLIRALAVRTMGCIRVEKITEYLCEPLRKALRDDVSHDSKTPRV 115
            MTVGKDVAMLFTDVINCIQTENIELKKLVYLYLINYAKTQPELTLLAVNTFVKDANDPNPLIRALAVRTMGCIRVEKITEYLCEPLRKALRDD  +  KT  V
Sbjct:    1 MTVGKDVAMLFTDVINCIQTENIELKKLVYLYLINYAKTQPELTLLAVNTFVKDANDPNPLIRALAVRTMGCIRVEKITEYLCEPLRKALRDDDPYVRKTAAV 103

[Close]

BLAST of mRNA_H-elongata_contig64199.14006.1 vs. uniprot
Match: A0A7S3MAA3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MAA3_9STRA)

HSP 1 Score: 173 bits (439), Expect = 9.930e-52
Identity = 85/108 (78.70%), Postives = 98/108 (90.74%), Query Frame = 0

Query:    8 QVIANMTVGKDVAMLFTDVINCIQTENIELKKLVYLYLINYAKTQPELTLLAVNTFVKDANDPNPLIRALAVRTMGCIRVEKITEYLCEPLRKALRDDVSHDSKTPRV 115
            +VIANMT+GKDV+ LFTDVINCIQT+N+ELKKLVYLYLINYAK+QP+L LLAVNTFVKDANDPNPLIRALA+RTMGCIRV+KITEYLCEPL + L+D+  +  KT  V
Sbjct:   45 KVIANMTIGKDVSTLFTDVINCIQTDNLELKKLVYLYLINYAKSQPDLALLAVNTFVKDANDPNPLIRALAIRTMGCIRVDKITEYLCEPLSRCLKDEDPYVRKTAAV 152

[Close]

BLAST of mRNA_H-elongata_contig64199.14006.1 vs. uniprot
Match: A0A812ZXS6_SYMMI (Ap2b1 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812ZXS6_SYMMI)

HSP 1 Score: 171 bits (432), Expect = 1.090e-51
Identity = 84/108 (77.78%), Postives = 96/108 (88.89%), Query Frame = 0

Query:    8 QVIANMTVGKDVAMLFTDVINCIQTENIELKKLVYLYLINYAKTQPELTLLAVNTFVKDANDPNPLIRALAVRTMGCIRVEKITEYLCEPLRKALRDDVSHDSKTPRV 115
            +VIANMTVGKDV+ LFTDV+NCIQT+N+ELKKLVYLYLINYAK+QPEL +LAVNTFVKDANDPNPLIRAL++RTMGCIRV  ITEYLCEPL + LRD+  +  KT  V
Sbjct:   43 KVIANMTVGKDVSTLFTDVVNCIQTDNLELKKLVYLYLINYAKSQPELAMLAVNTFVKDANDPNPLIRALSIRTMGCIRVNTITEYLCEPLSRCLRDEDPYVRKTAAV 150

[Close]

BLAST of mRNA_H-elongata_contig64199.14006.1 vs. uniprot
Match: A0A7S2H873_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H873_9STRA)

HSP 1 Score: 177 bits (449), Expect = 1.250e-51
Identity = 89/108 (82.41%), Postives = 100/108 (92.59%), Query Frame = 0

Query:    8 QVIANMTVGKDVAMLFTDVINCIQTENIELKKLVYLYLINYAKTQPELTLLAVNTFVKDANDPNPLIRALAVRTMGCIRVEKITEYLCEPLRKALRDDVSHDSKTPRV 115
            +VIA+MTVGKDV+MLFTDV+NC+QT NIELKKLVYLYLINYAK+QPELTLLAVNTFVKDANDPNPLIRALAVRTMGCIRV++ITEYLCEPL +ALRD+  +  KT  V
Sbjct:   48 KVIASMTVGKDVSMLFTDVLNCVQTGNIELKKLVYLYLINYAKSQPELTLLAVNTFVKDANDPNPLIRALAVRTMGCIRVDRITEYLCEPLSRALRDEDPYVRKTAAV 155

[Close]

BLAST of mRNA_H-elongata_contig64199.14006.1 vs. uniprot
Match: A0A816A959_9BILA (Hypothetical protein n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A816A959_9BILA)

HSP 1 Score: 168 bits (426), Expect = 1.710e-50
Identity = 82/108 (75.93%), Postives = 96/108 (88.89%), Query Frame = 0

Query:    8 QVIANMTVGKDVAMLFTDVINCIQTENIELKKLVYLYLINYAKTQPELTLLAVNTFVKDANDPNPLIRALAVRTMGCIRVEKITEYLCEPLRKALRDDVSHDSKTPRV 115
            +VIA+MTVGKDV+ LF DV+NC+QT+N+ELKKLVYLYL+NYAKTQPE+ +LAVNTF KD NDPNPLIRALAVRTMGCIRVEKITE+LCEPLRK L+D+  +  KT  V
Sbjct:   12 KVIASMTVGKDVSQLFPDVVNCMQTDNLELKKLVYLYLMNYAKTQPEMAILAVNTFAKDCNDPNPLIRALAVRTMGCIRVEKITEHLCEPLRKCLKDEDPYVRKTAAV 119

[Close]

BLAST of mRNA_H-elongata_contig64199.14006.1 vs. uniprot
Match: A0A813QRU4_ADIRI (Hypothetical protein n=1 Tax=Adineta ricciae TaxID=249248 RepID=A0A813QRU4_ADIRI)

HSP 1 Score: 168 bits (426), Expect = 1.760e-50
Identity = 82/108 (75.93%), Postives = 96/108 (88.89%), Query Frame = 0

Query:    8 QVIANMTVGKDVAMLFTDVINCIQTENIELKKLVYLYLINYAKTQPELTLLAVNTFVKDANDPNPLIRALAVRTMGCIRVEKITEYLCEPLRKALRDDVSHDSKTPRV 115
            +VIA+MTVGKDV+ LF DV+NC+QT+N+ELKKLVYLYL+NYAKTQPE+ +LAVNTF KD NDPNPLIRALAVRTMGCIRVEKITE+LCEPLRK L+D+  +  KT  V
Sbjct:   35 KVIASMTVGKDVSQLFPDVVNCMQTDNLELKKLVYLYLMNYAKTQPEMAILAVNTFAKDCNDPNPLIRALAVRTMGCIRVEKITEHLCEPLRKCLKDEDPYVRKTAAV 142

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig64199.14006.1 vs. uniprot

BLAST of mRNA_H-elongata_contig64199.14006.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7R9W7V1_9STRA	2.620e-54	82.41	Hypothetical protein (Fragment) n=1 Tax=Pseudictyo...	[more]
A0A7S2EVX9_TRICV	2.780e-54	82.41	Hypothetical protein (Fragment) n=1 Tax=Trieres ch...	[more]
A0A836CH70_9STRA	2.570e-53	89.81	Coatomer protein complex, beta sub-unit n=1 Tax=Tr...	[more]
A0A482RX86_9ARCH	1.850e-52	80.56	Adaptin_N domain-containing protein (Fragment) n=1...	[more]
A0A6H5J742_9PHAE	2.090e-52	93.20	B2-adapt-app_C domain-containing protein n=2 Tax=E...	[more]
A0A7S3MAA3_9STRA	9.930e-52	78.70	Hypothetical protein (Fragment) n=1 Tax=Spumella e...	[more]
A0A812ZXS6_SYMMI	1.090e-51	77.78	Ap2b1 protein (Fragment) n=1 Tax=Symbiodinium micr...	[more]
A0A7S2H873_9STRA	1.250e-51	82.41	Hypothetical protein (Fragment) n=1 Tax=Helicothec...	[more]
A0A816A959_9BILA	1.710e-50	75.93	Hypothetical protein n=1 Tax=Adineta steineri TaxI...	[more]
A0A813QRU4_ADIRI	1.760e-50	75.93	Hypothetical protein n=1 Tax=Adineta ricciae TaxID...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002553	Clathrin/coatomer adaptor, adaptin-like, N-terminal	PFAM	PF01602	Adaptin_N	coord: 8..106 e-value: 1.2E-32 score: 113.2
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 4..112 e-value: 3.3E-44 score: 153.3
IPR026739	AP complex subunit beta	PANTHER	PTHR11134	ADAPTER-RELATED PROTEIN COMPLEX, BETA SUBUNIT	coord: 8..112
None	No IPR available	PANTHER	PTHR11134:SF31	AP-1 COMPLEX SUBUNIT BETA-1	coord: 8..112
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 6..106

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig64199	contig	H-elongata_contig64199:443..1673 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig64199.14006.1	mRNA_H-elongata_contig64199.14006.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig64199 443..1673 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig64199.14006.1 ID=prot_H-elongata_contig64199.14006.1|Name=mRNA_H-elongata_contig64199.14006.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=117bp
VLVPVLVQVIANMTVGKDVAMLFTDVINCIQTENIELKKLVYLYLINYAK
TQPELTLLAVNTFVKDANDPNPLIRALAVRTMGCIRVEKITEYLCEPLRK
ALRDDVSHDSKTPRVP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002553	Clathrin/coatomer_adapt-like_N
IPR011989	ARM-like
IPR026739	AP_beta
IPR016024	ARM-type_fold