mRNA_H-elongata_contig64042.13993.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig64042.13993.1
Unique NamemRNA_H-elongata_contig64042.13993.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig64042.13993.1 vs. uniprot
Match: D7FT31_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT31_ECTSI)

HSP 1 Score: 252 bits (643), Expect = 1.850e-80
Identity = 119/148 (80.41%), Postives = 132/148 (89.19%), Query Frame = 1 
Query:    1 RMLRESTVQVSVPTGFIFHETRCGSTLVANMLASVETNVMWSESTGPWKLLHTCPKCPKSQIVPWLKIIMSAMSRSAHHNHFYFKFQSSEDIDAATTAFPTVPWIFIFREPVEVMMSRLGAQRIGMEGMEKEVAARVRYRLSAPAKIP 444
            R+L ESTV +  PTGFIFHETRCGSTLVANMLASVETNVMWSESTGPWK++HTCPKC K QIVPWL++IM AM+RSA H+HFYFKFQSSEDIDA T+A+P  PWIFIFREP+EVMMSRLGAQRIGMEGMEKEVAARV   +  P+KIP
Sbjct:  129 RLLEESTVPIPPPTGFIFHETRCGSTLVANMLASVETNVMWSESTGPWKVMHTCPKCHKEQIVPWLRVIMDAMARSARHDHFYFKFQSSEDIDAVTSAYPDTPWIFIFREPIEVMMSRLGAQRIGMEGMEKEVAARVERGMK-PSKIP 275
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BLAST of mRNA_H-elongata_contig64042.13993.1 vs. uniprot
Match: A0A6H5KRY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRY1_9PHAE)

HSP 1 Score: 249 bits (635), Expect = 1.040e-77
Identity = 118/147 (80.27%), Postives = 130/147 (88.44%), Query Frame = 1 
Query:    1 RMLRESTVQVSVPTGFIFHETRCGSTLVANMLASVETNVMWSESTGPWKLLHTCPKCPKSQIVPWLKIIMSAMSRSAHHNHFYFKFQSSEDIDAATTAFPTVPWIFIFREPVEVMMSRLGAQRIGMEGMEKEVAARVRYRLSAPAKI 441
            R+L ESTV +  PTGFIFHETRCGSTLVANMLASVETNVMWSESTGPWK++HTCPKC K QIVPWL++IM AM+RSA H HFYFKFQSSEDIDA T+A+P  PWIFIFREP+EVMMSRLGAQRIGMEGMEKEVAARV   +  P+KI
Sbjct:  262 RLLEESTVPIPPPTGFIFHETRCGSTLVANMLASVETNVMWSESTGPWKVMHTCPKCHKEQIVPWLRVIMDAMTRSARHKHFYFKFQSSEDIDAVTSAYPDTPWIFIFREPIEVMMSRLGAQRIGMEGMEKEVAARVERGMK-PSKI 407
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BLAST of mRNA_H-elongata_contig64042.13993.1 vs. uniprot
Match: A0A835ZJN2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJN2_9STRA)

HSP 1 Score: 129 bits (325), Expect = 2.300e-34
Identity = 59/124 (47.58%), Postives = 84/124 (67.74%), Query Frame = 1 
Query:   91 MLASVETNVMWSESTGPWKLLHTCPKCPKSQIVPWLKIIMSAMSRSAHH--------NHFYFKFQSSEDIDAATTAFPTVPWIFIFREPVEVMMSRLGAQRIGMEGMEKEVAARVRYRLSAPAK 438
            MLAS+  N++WSESTGPWK+LHTC  C   Q+  +++++++ M R+           +  +FK QSSE +D  + AFP VPW+F+FREPVEVMMSR+GAQRIGMEG   +VA +++      A+
Sbjct:    1 MLASIPHNLVWSESTGPWKVLHTCKDCQTEQLAKYMRLVVTLMGRAPRDPLVGEERPSRLFFKLQSSEGVDVLSLAFPEVPWMFLFREPVEVMMSRMGAQRIGMEGTHDDVAQKLQQMAGKQAQ 124
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BLAST of mRNA_H-elongata_contig64042.13993.1 vs. uniprot
Match: A0A4D9CT70_9STRA (JmjC domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CT70_9STRA)

HSP 1 Score: 114 bits (286), Expect = 9.930e-27
Identity = 58/117 (49.57%), Postives = 78/117 (66.67%), Query Frame = 1 
Query:   37 PTGFIFHETRCGSTLVANMLASVETNVMWSESTGPWKLLHTCPK--CPKSQIVPWLKIIMSAMSRSAHHNHFYFKFQSSE--DIDAATTAFPTVPWIFIFREPVEVMMSRLGAQRIG 375
            PTGFIFHE+R GSTLVANMLASV TN+++SE + P  ++H C    C +   V  L++ + AM RS HH+HF+ KF SS   D+D    AFP  PW +I+R+PVE+++S     R G
Sbjct:  213 PTGFIFHESRVGSTLVANMLASVPTNLVYSEPSVPAHVIHLCKSAGCSEETTVRLLRMAILAMGRSHHHDHFFIKFSSSTVVDMDLILKAFPETPWAYIYRDPVEIIVSNFQRGRGG 329
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BLAST of mRNA_H-elongata_contig64042.13993.1 vs. uniprot
Match: A0A7S3ZKE9_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZKE9_9STRA)

HSP 1 Score: 107 bits (266), Expect = 2.240e-24
Identity = 52/119 (43.70%), Postives = 80/119 (67.23%), Query Frame = 1 
Query:    7 LRESTVQVSVPTGFIFHETRCGSTLVANMLASVETNVMWSESTGPWKLLHTCPKCPKSQIVPWLKIIMSAMSRSA--HHNHFYFKFQSSE--DIDAATTAFPTVPWIFIFREPVEVMMS 351
            +R+  ++   P+GF+FHE+R GSTLVANMLA+V TN+++SES  P  +L+ C  C K +    L+ +++ M  S   +H H +FKFQS+   +I +   AFP  PW+F++R+PV+ MMS
Sbjct:  168 MRKKNIKPVKPSGFVFHESRVGSTLVANMLAAVPTNIVYSESAPPPAVLNHCRSCSKQRKTDILQKLIALMGASPTNYHTHLFFKFQSATVPNIRSLLDAFPETPWLFVYRDPVQTMMS 286
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BLAST of mRNA_H-elongata_contig64042.13993.1 vs. uniprot
Match: A0A7S2PP86_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PP86_9STRA)

HSP 1 Score: 104 bits (259), Expect = 7.020e-24
Identity = 58/125 (46.40%), Postives = 80/125 (64.00%), Query Frame = 1 
Query:    7 LRESTVQVSVPTGFIFHETRCGSTLVANMLASV--ETNVMWSESTGPWKLLHTCP--KCPKSQIVPWLKIIMSAMSRSAH--HNHFYFKFQS--SEDIDAATTAFPTVPWIFIFREPVEVMMSRL 357
            L    V+V  PTGF+FHE+RCGSTLVAN LA+   E + +++EST P  +L  CP  +C K +       ++  M R+      H +FKFQS  S +ID A  AFP+VPWI+++R+PV+VMMS L
Sbjct:  179 LESQDVKVLQPTGFVFHESRCGSTLVANSLAAFAPERSRVYTESTPPSSVLVACPSGQCNKGKQADLFSDVLYLMGRTTDLKEEHLFFKFQSITSLNIDVARLAFPSVPWIYVYRDPVQVMMSHL 303
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BLAST of mRNA_H-elongata_contig64042.13993.1 vs. uniprot
Match: A0A6H5JFB5_9PHAE (JmjC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFB5_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 9.100e-24
Identity = 51/112 (45.54%), Postives = 74/112 (66.07%), Query Frame = 1 
Query:   37 PTGFIFHETRCGSTLVANMLASVETNVMWSESTGPWKLLHTCPK--CPKSQIVPWLKIIMSAMSRSAHHNHFYFKFQSSED--IDAATTAFPTVPWIFIFREPVEVMMSRLG 360
            PTGF+FH +RCGSTL AN++ S   N+++SES  P  ++  C +  C + Q V  L+ ++ AM +++ H H +FKFQSS+   I     AFP  PW+F++R+PV VMMS LG
Sbjct:  153 PTGFVFHMSRCGSTLTANLMGSSPHNIVYSESKPPVAVMSLCDQVGCTEEQRVAALRTVILAMGKTSFHKHMFFKFQSSQTRFIHYYRKAFPNTPWVFVYRDPVPVMMSLLG 264
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BLAST of mRNA_H-elongata_contig64042.13993.1 vs. uniprot
Match: D7FTH5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTH5_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 1.400e-22
Identity = 53/112 (47.32%), Postives = 74/112 (66.07%), Query Frame = 1 
Query:   37 PTGFIFHETRCGSTLVANMLASVETNVMWSESTGPWKLLHTC--PKCPKSQIVPWLKIIMSAMSRSAH---HNHFYFKFQSSEDIDAATTAFPTVPWIFIFREPVEVMMSRL 357
            P GFI+HETRCGSTLVANMLA++  + ++SES  P + +  C    C +  +V   +  M+ M R  +   H H YFKFQ+S+ I   + A+P VPW+F+FR+PVEVM+S L
Sbjct:  198 PKGFIYHETRCGSTLVANMLATLAPSRVFSESKPPTQTIRECLTAGCDRHLLVKMFRNTMALMGRRRNGEQHEHLYFKFQNSKQI---SEAYPEVPWVFVFRDPVEVMVSNL 306
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BLAST of mRNA_H-elongata_contig64042.13993.1 vs. uniprot
Match: A0A7R9U551_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U551_9STRA)

HSP 1 Score: 102 bits (253), Expect = 2.680e-22
Identity = 50/109 (45.87%), Postives = 70/109 (64.22%), Query Frame = 1 
Query:   37 PTGFIFHETRCGSTLVANMLASVETNVMWSESTGPWKLLHTCPKCPKSQIVPWLKIIMSAMSRSAHHNHFYFKFQSSEDIDAATT--AFPTVPWIFIFREPVEVMMSRL 357
            P GF+FHE+R GSTL+ANMLA+V   ++W+ES  P   L  CP+CP  Q +  L+ +M  M  S+ H   +FKFQS+     AT   AFP  P++F+FR PV+ +MS +
Sbjct:  158 PAGFVFHESRVGSTLIANMLAAVPRFLVWTESKPPATALLYCPQCPAEQRLEILRKVMRLMCSSSFHTACFFKFQSATTPAMATVLAAFPKTPYVFLFRNPVQTLMSHM 266
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BLAST of mRNA_H-elongata_contig64042.13993.1 vs. uniprot
Match: D7G7C8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7C8_ECTSI)

HSP 1 Score: 100 bits (248), Expect = 1.020e-21
Identity = 51/118 (43.22%), Postives = 72/118 (61.02%), Query Frame = 1 
Query:    7 LRESTVQVSVPTGFIFHETRCGSTLVANMLASVETNVMWSESTGPWKLLHTCPKCPKSQIVPWLKIIMSAMSRSAH-HNHFYFKFQSSEDIDAATTAFPTVPWIFIFREPVEVMMSRL 357
            +RE   +   P GF++HETR GSTLVANMLA V +N++ SES      +  C  C + Q V  L+ IM+ +    + H H +FKFQ S  +     A+P V W+++FR+PVEVM+S L
Sbjct:  100 MREHPEEFLQPNGFVYHETRTGSTLVANMLAHVPSNLVVSESNMAEDPVRRCSHCTEMQKVTLLREIMTLLGNGRNGHKHLFFKFQDSTTLPLMMKAYPEVGWVYLFRDPVEVMVSNL 217
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig64042.13993.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT31_ECTSI1.850e-8080.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRY1_9PHAE1.040e-7780.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZJN2_9STRA2.300e-3447.58Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9CT70_9STRA9.930e-2749.57JmjC domain-containing protein n=3 Tax=Monodopsida... [more]
A0A7S3ZKE9_9STRA2.240e-2443.70Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S2PP86_9STRA7.020e-2446.40Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A6H5JFB5_9PHAE9.100e-2445.54JmjC domain-containing protein n=2 Tax=Ectocarpus ... [more]
D7FTH5_ECTSI1.400e-2247.32Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7R9U551_9STRA2.680e-2245.87Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
D7G7C8_ECTSI1.020e-2143.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig64042contigH-elongata_contig64042:209..3048 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score251.1
Seed ortholog evalue3.2e-64
Seed eggNOG ortholog2880.D7FT31
EggNOG free text desc.Sulfotransferase family
EggNOG OGs2D2H3@1,2SMVN@2759
Ec32 ortholog descriptionMembrane-localised P-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-04_002630.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons4
Model size453
Cds size450
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig64042.13993.1prot_H-elongata_contig64042.13993.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig64042 212..3048 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931026.5294237-UTR-H-elongata_contig64042:208..2111622931026.5294237-UTR-H-elongata_contig64042:208..211Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig64042 209..211 +
1691679667.2274926-UTR-H-elongata_contig64042:208..2111691679667.2274926-UTR-H-elongata_contig64042:208..211Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig64042 209..211 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931026.5443404-CDS-H-elongata_contig64042:211..3271622931026.5443404-CDS-H-elongata_contig64042:211..327Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64042 212..327 +
1691679667.241183-CDS-H-elongata_contig64042:211..3271691679667.241183-CDS-H-elongata_contig64042:211..327Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64042 212..327 +
1622931026.5609992-CDS-H-elongata_contig64042:1162..12831622931026.5609992-CDS-H-elongata_contig64042:1162..1283Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64042 1163..1283 +
1691679667.2625299-CDS-H-elongata_contig64042:1162..12831691679667.2625299-CDS-H-elongata_contig64042:1162..1283Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64042 1163..1283 +
1622931026.5759811-CDS-H-elongata_contig64042:1960..20591622931026.5759811-CDS-H-elongata_contig64042:1960..2059Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64042 1961..2059 +
1691679667.2758183-CDS-H-elongata_contig64042:1960..20591691679667.2758183-CDS-H-elongata_contig64042:1960..2059Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64042 1961..2059 +
1622931026.589847-CDS-H-elongata_contig64042:2934..30481622931026.589847-CDS-H-elongata_contig64042:2934..3048Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64042 2935..3048 +
1691679667.284756-CDS-H-elongata_contig64042:2934..30481691679667.284756-CDS-H-elongata_contig64042:2934..3048Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64042 2935..3048 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig64042.13993.1

>prot_H-elongata_contig64042.13993.1 ID=prot_H-elongata_contig64042.13993.1|Name=mRNA_H-elongata_contig64042.13993.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=150bp
MLRESTVQVSVPTGFIFHETRCGSTLVANMLASVETNVMWSESTGPWKLL
HTCPKCPKSQIVPWLKIIMSAMSRSAHHNHFYFKFQSSEDIDAATTAFPT
VPWIFIFREPVEVMMSRLGAQRIGMEGMEKEVAARVRYRLSAPAKIPLC*
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mRNA from alignment at H-elongata_contig64042:209..3048+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig64042.13993.1 ID=mRNA_H-elongata_contig64042.13993.1|Name=mRNA_H-elongata_contig64042.13993.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2840bp|location=Sequence derived from alignment at H-elongata_contig64042:209..3048+ (Himanthalia elongata Himel1 dioecious)
CGAATGCTCCGAGAAAGCACGGTACAGGTTTCTGTGCCGACGGGTTTCAT
CTTCCACGAGACGCGGTGCGGTTCGACCCTCGTGGCCAACATGCTCGCGT
CGGTGGAGACCAATGTCATGTGAGCGTAGCGCATCGTAGCGGTTTTGACC
GCCCCGGTTATCCTCTTGGTGCCGTGGGTAGTTGTAAAGATAACGTAGCG
TGTTTGACTCGTCGATTTTCCTCTTGGTGTCGCGGGAGTTGACGAGTGCT
ATTCTACAGTATATCTCCTAGTTTTTCCGGGTTTCTATATCTATGTGCGT
TTTTTGTGTGCCGTTTCAACCGAAGCGTCGGAGTGACGACACACAGATAA
AAAGCTTGATTTTTCGTACTGTACCGGACAGCAGTACCGGTCCCCTTAAT
CTTTGGCGTGAAACGCCCAATTTTTTACCTAGTCTTTGAATTTTGTCCCC
CCCCCCCCTCCCGACCTCTCTTTAATGTAATTTGTGTCAGTCATTTTTTT
GTCCCATCTGTGTGTGTCGATTTGTAGAAAGTGTTTTTCTTATGTCTCTG
TTTCACACCAGTTCGCTGGCTGTACTGGCTGTATATGTTTCTCTCTTTCT
CTATCTACTTCTCTGTGTATTTTACGTTAACCGATCGGGCCCCATACGGG
GTTTCCTAACAGCTTCTGGGATGTTGGATAGGGGTAAACGAAAAAGAAGC
AAGAAATACACAAGACCGAGACTGGAAGATGGGGGGTATATATATATATA
TATATATATACTTTTCACAGCCTTGGCTACAGTGTCACGCTGAGATCATC
AATTAAGATAGAGGACAATAAAATGAAGGCTCTGTATCAAAGCCTCTGTT
TTGGCATCATGTATCTTGTGCTTATCCTGCCTCATGGTACACCGGTTCAT
GTATATTTCTTTATCTCTCTCTCTCTCTCTCTGTGCCCTCTGCTTGGGGG
GCAGGTGGTCCGAGAGCACGGGCCCTTGGAAGCTGTTGCACACCTGCCCG
AAGTGCCCCAAGTCTCAGATCGTCCCCTGGCTCAAGATCATCATGAGCGC
TATGTCCAGAAGCGCGCACCACAACGTGAGCCGTCATCCGCGTCCCCCAA
AAACTAGTCTTGTTCGTTCCGTATACGCTTATTGGTTGATCTTTCAATGT
ATTTTGTAGGACATTTTATTCCCTGTCCCCATTATCCTCCGGTAAAATTC
TTACATTGTTATATTTTTGCTTCTACTGCTCCTTGTTGACTAAGGGAGGC
TCATATGATAAGGTAGGGTTTTTTGGGGGGGGAGGTAAAGGCTAGGTTAA
CAAGAAATTATCTCGATGTTGCCGTTTGTACGGATTTTTCGATCGTTCTG
CATGGCGTGTGAGGTACAAAAGGTAACATTTTGCTTCGAAAGCAGAGAAA
TGAAACGGTTCACCAGGCATTGTAGATTTCCCGTCAGATCCCCCCCCCCC
CTCTCCCCCTGTCTGTGCTTATGGGCCTGTATTACCGAGTAGATGCGGTA
AAATTGTTGAAATTTGAGAAACTGGTGCGATAGTATAAAAACGGTTACGA
GAAAAAGTGTGTGTGTGTGTGTGTGTGAGTGTGTTTATGAAGTTGCACAT
CACTGCGCAATCCGAGCCTGCTATTCTAGGCTACTCGCATTGATCCTTCT
CCCTGAAGGTGGACCAATTATGTTTGCTCGGAAAATCTTTGTATTTTTGT
TCTCGATCTACCTCAAGCCTCCTTCGGCCGCTCCTCTCTTTTTTTTTTTC
AGCATTTTTATTTTAAGTTTCAAAGCTCGGAAGACATCGACGCGGCCACC
ACTGCCTTCCCTACCGTGCCGTGGATTTTCATCTTCAGAGAGCCGGTCGA
GGTGCGTACGGTGAACCTATACCATCCGCTCATCTCTCTCTATCTATGTA
TATCTATATATCTATATATATATCCCCCTTTCCCTTCTATCCCGCCTCCT
AACCTTGATCCAAAACTCCTGCAGATGCCTAAAAAGCATCGACGCCGTGG
AATAAAACGCATGGTGGGTGACAAAACAACATTTGACCAACCGTAACCAC
ATTTGACCAACCGTAACCATATTTGACCAACCGTGACCATATTTGACCAA
CCGTAACCATATTTATTTTTGCCAAGAGGACCCCCTGAATGGTTAAATTT
GTGTCAGCTAAGGCAGGTCGTATCGACACTGAACCGGGTCTCCTAGACAA
AATGGGTGTGGTGGTAGAAGTCACGTTCTAAATTCCCCCCCCCCCCAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCACANNNNNNNNNNACAAAA
AAAAATACACAAAAAAAAATGGGACGAAAAAAAAAAAAAAAAAAAAAAAC
AACAACCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGCTCGCACT
CGAGTACTTTAGTTTAAGGCGTTTTCTTATGCGTGGAATCGATGGGATGT
CATATAATATTGGGTACCGGTATATGGTACTAATACCAGTATACTTTTAC
TATACCATAATACTACGCTACATTAATCTACTATACTAAAGTATCATGTG
GCCATCGACACCACCGTCGGGACTGTTGCTTCTGCCACATACACACACAC
ACACACGCACGCACATCTCTTTGTTGCGTTTTTTTCATCATAGTCTATTG
CTTTTTTCATCATAGTCTAAGGTTGGGTTCGACTCTTCCCGTGTGTGTTG
GTGTGTTTTTGTTGTGTGGAGCGCAGGTCATGATGTCCCGCCTGGGAGCG
CAGCGCATTGGGATGGAGGGAATGGAGAAGGAAGTGGCGGCGAGGGTGAG
GTACCGGTTGTCCGCGCCTGCGAAGATTCCCCTTTGCTAA
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Coding sequence (CDS) from alignment at H-elongata_contig64042:209..3048+

>mRNA_H-elongata_contig64042.13993.1 ID=mRNA_H-elongata_contig64042.13993.1|Name=mRNA_H-elongata_contig64042.13993.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=900bp|location=Sequence derived from alignment at H-elongata_contig64042:209..3048+ (Himanthalia elongata Himel1 dioecious)
ATGCTCCGAGAAAGCACGGTACAGGTTTCTGTGCCGACGGGTTTCATCTT
CCACGAGACGCGGTGCGGTTCGACCCTCGTGGCCAACATGCTCGCGTCGG
TGGAGACCAATGTCATATGCTCCGAGAAAGCACGGTACAGGTTTCTGTGC
CGACGGGTTTCATCTTCCACGAGACGCGGTGCGGTTCGACCCTCGTGGCC
AACATGCTCGCGTCGGTGGAGACCAATGTCATGTGGTCCGAGAGCACGGG
CCCTTGGAAGCTGTTGCACACCTGCCCGAAGTGCCCCAAGTCTCAGATCG
TCCCCTGGCTCAAGATCATCATGAGCGCTATGTCCAGAAGCGCGCACCAC
AACGTGGTCCGAGAGCACGGGCCCTTGGAAGCTGTTGCACACCTGCCCGA
AGTGCCCCAAGTCTCAGATCGTCCCCTGGCTCAAGATCATCATGAGCGCT
ATGTCCAGAAGCGCGCACCACAACCATTTTTATTTTAAGTTTCAAAGCTC
GGAAGACATCGACGCGGCCACCACTGCCTTCCCTACCGTGCCGTGGATTT
TCATCTTCAGAGAGCCGGTCGAGCATTTTTATTTTAAGTTTCAAAGCTCG
GAAGACATCGACGCGGCCACCACTGCCTTCCCTACCGTGCCGTGGATTTT
CATCTTCAGAGAGCCGGTCGAGGTCATGATGTCCCGCCTGGGAGCGCAGC
GCATTGGGATGGAGGGAATGGAGAAGGAAGTGGCGGCGAGGGTGAGGTAC
CGGTTGTCCGCGCCTGCGAAGATTCCCCTTTGCTAAGTCATGATGTCCCG
CCTGGGAGCGCAGCGCATTGGGATGGAGGGAATGGAGAAGGAAGTGGCGG
CGAGGGTGAGGTACCGGTTGTCCGCGCCTGCGAAGATTCCCCTTTGCTAA
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