prot_H-elongata_contig64041.13992.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig64041.13992.1
Unique Nameprot_H-elongata_contig64041.13992.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length442
Homology
BLAST of mRNA_H-elongata_contig64041.13992.1 vs. uniprot
Match: D8LB61_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB61_ECTSI)

HSP 1 Score: 230 bits (587), Expect = 8.030e-63
Identity = 177/481 (36.80%), Postives = 222/481 (46.15%), Query Frame = 0
Query:    1 ETLHLKRRAIAAALARSAFARVRGVAWDDIDIDWAMENYLSQAEHSVCTILGVNALGPSTAKHARSRGGVSNGPGPGAATEVSRNMTADPAEEGDFLMSSVFPLPPPKPPRYVKNGVFADNGASPAAPSVAAMTAAADAAVATPPSNPAYIPRDSSAPGRCFFPISIRP-----------------------VDGTARNDVSKPYDALDDAEGMEGIQGNDTDGDSVSTRTVDTRESNITQYKMTAAERSRAYKDIFRTGG-EKAKKRPRSPVERTPLRLPFPMAPGGSMCLPVASLNEMPPCGYNHDSQTESGSYCAWCMLTGLKCSGDCGASSGGDGAGSQGKEDIGGKRGVDPDFAC---------------APRHRDFRLPYEIMYDYQRDIFNSEVRQLGVRGTADAMGEFKSISSNVYLSKKPPAKDDGEGHRCHCKPPPDGQPGCTEGCSNRATNEECTSRTCGLVGSAQCDNR 442
            E   +K +++ AALARSAF+++  ++W D+++DW   + L++AE     +L   A   + A+   S                     AD  E+ +  MS++FPLP PKP R+VK GVFA   A P   + AA +++   A  +PP   + I       G+       +P                                                                       QY MTAA R++AYK IFRTGG +K KKRPRSPV  TPL+LPFP  P G + L  A L E PPCG     QTE+GS  AW +L                     G E  GG  G D                     P HRDFRLPY+++YD     F  E+RQLG+R   DAM EF+ I+SNVYLSKKPPAKD GEGHRC C PP DG  GCTE CSNRAT EECT RTCGL G   C NR
Sbjct:    2 EIYRVKWKSVGAALARSAFSQLELLSWQDVNVDWCPGDRLAEAERRNSALLHAGA--GAKARDGGSXXXXXXXXXXXXXXXXXXXAEAD-GEQEELCMSALFPLPQPKPARFVKKGVFA---AEPGTATAAARSSSTVVAP-SPPRPHSTITEGEVLAGKLAADDDGKPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQYAMTAAARTKAYKGIFRTGGGDKPKKRPRSPVASTPLQLPFPRPPAG-VSLATADLEERPPCGSEEYVQTEAGSEWAWGLL---------------------GDEQDGGGGGXDVASXXXXXXXXXXXXNGESGGPGHRDFRLPYDVIYDCHYQRFLGEMRQLGMRSADDAMTEFQGITSNVYLSKKPPAKDVGEGHRCGCVPPSDGSAGCTEACSNRATFEECTKRTCGLGGKGVCGNR 453          
BLAST of mRNA_H-elongata_contig64041.13992.1 vs. uniprot
Match: A0A6H5KC59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC59_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 8.900e-40
Identity = 153/471 (32.48%), Postives = 190/471 (40.34%), Query Frame = 0
Query:    1 ETLHLKRRAIAAALARSAFARVRGVAWDDIDIDWAMENYLSQAEHSVCTILGVNALGPSTAKHARSRGGVSNGPGPGAATEVSRNMTADPAEEG-DFLMSSVFPLPPPKPPRYVKNGVFADNGASPAAPSVAAMTAAADAAVATPPSNPAYIPRDSSAPGRCF-------------------------FPISIRPVDGTARNDVSKPYDALDDAEGMEGIQGNDTDGDSVSTRTVDTRESNITQYKMTAAERSRAYKDIFRTGG-EKAKKRPRSPVERTPLRLPFPMAPGGSMCLPVASLNEMPPCGYNHDSQTESGSYCAWCMLTGLKCSGDCGASSGGDGAGSQGKEDIGGKRGVDPDFACAPRHRDFRLPYEIMYDYQRDIFNSEVRQLGVRGTADAMGEFKSISSNVYLSKKPPAKDDGEGHRCHCKPPPDGQPGCTEGCSNR--ATNEECTSRTCGLVGSAQCDNR 442
            E   +KR+++ AALARSAF+++  ++W+D+++DW     L++AE     +LG                                           +  MS++FPLP PKP R+VK GVFA      A P  A   A + + V   PS P  +P  +   G                                                                                   QY MTAA R++AYK IFRTGG +K KKRPRSPV  TPL LPFP  P G + L  A L E PPCG     QTE+GS  AW +L G K  G      GGDG  + G                 PRH DFRLPY+++YD     F  E+RQLG+R   DAM EF  I+SNVYLSKK                          G   R  AT EECT RTCGL G   C NR
Sbjct:  234 EMYRVKRKSVGAALARSAFSQLELLSWEDVNVDWCPAERLAEAERRNSALLGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELCMSALFPLPQPKPARFVKKGVFA------AEPGTATADARSSSTVVA-PSPP--LPHSTITEGEVLAGKLAADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQYAMTAAARTKAYKGIFRTGGGDKPKKRPRSPVASTPLHLPFPRPPAG-VSLATADLEERPPCGSEEYVQTEAGSEWAWGLL-GDKQDG------GGDGDVASGXXXXXXXXXXXXXXXGGPRHGDFRLPYDVIYDCHYQRFLGEMRQLGMRSADDAMTEFHGITSNVYLSKKE-----------------------LRGSKQRVWATFEECTKRTCGLGGKGVCGNR 664          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig64041.13992.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LB61_ECTSI8.030e-6336.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KC59_9PHAE8.900e-4032.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR46147:SF3HISTONE-LYSINE N-METHYLTRANSFERASE ASH1coord: 339..442
NoneNo IPR availablePANTHERPTHR46147FAMILY NOT NAMEDcoord: 339..442
IPR006560AWS domainPROSITEPS51215AWScoord: 396..442
score: 11.947

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig64041contigH-elongata_contig64041:1200..2947 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig64041.13992.1mRNA_H-elongata_contig64041.13992.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig64041 1200..2947 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig64041.13992.1 ID=prot_H-elongata_contig64041.13992.1|Name=mRNA_H-elongata_contig64041.13992.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=442bp
ETLHLKRRAIAAALARSAFARVRGVAWDDIDIDWAMENYLSQAEHSVCTI
LGVNALGPSTAKHARSRGGVSNGPGPGAATEVSRNMTADPAEEGDFLMSS
VFPLPPPKPPRYVKNGVFADNGASPAAPSVAAMTAAADAAVATPPSNPAY
IPRDSSAPGRCFFPISIRPVDGTARNDVSKPYDALDDAEGMEGIQGNDTD
GDSVSTRTVDTRESNITQYKMTAAERSRAYKDIFRTGGEKAKKRPRSPVE
RTPLRLPFPMAPGGSMCLPVASLNEMPPCGYNHDSQTESGSYCAWCMLTG
LKCSGDCGASSGGDGAGSQGKEDIGGKRGVDPDFACAPRHRDFRLPYEIM
YDYQRDIFNSEVRQLGVRGTADAMGEFKSISSNVYLSKKPPAKDDGEGHR
CHCKPPPDGQPGCTEGCSNRATNEECTSRTCGLVGSAQCDNR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006560AWS_dom